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Ostreococcus tauri


Gene ID
Ot04g01610
Locus
Ot04g01610
Functional Description
THRC_SOLTU Threonine synthase, chloroplast precursor (ISS)
Gene Type
protein-coding gene
Contig
chrom04
Last Modified On
09 March 2010 0h22
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
THRC_SOLTU Threonine synthase, chloroplast precursor (ISS)
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
1.
catalytic activity

2.
pyridoxal phosphate binding

Biological Process
1.
metabolic process

Protein Domains 


Domain IDDescriptionDatabase
IPR004450 Threonine synthase InterPro
IPR001926 Pyridoxal phosphate-dependent enzyme, beta subunit InterPro
PTHR10314 SER/THR DEHYDRATASE, TRP SYNTHASE HMMPanther
G3DSA:3.40.50.1100 no description Gene3D

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
CAL51559.1 THRC_SOLTU Threonine synthase, chloroplast precursor (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 937
Identities = 480/480 (100%), Positives = 480/480 (100%), Gaps = 0/480 (0%)
NCBI
Show Blast
XP_001417461.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 783
Identities = 416/497 (83%), Positives = 434/497 (87%), Gaps = 25/497 (5%)
NCBI
Show Blast
XP_002508196.1 predicted protein [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 726
Identities = 369/419 (88%), Positives = 396/419 (94%), Gaps = 0/419 (0%)
NCBI
Show Blast
EEH57643.1 predicted protein [Micromonas pusilla CCMP1545]
Evalue: 0.0 | Bitscore: 724
Identities = 374/469 (79%), Positives = 408/469 (86%), Gaps = 6/469 (1%)
NCBI
Show Blast
Q9MT28 Threonine synthase, chloroplastic OS=Solanum tuberosum PE=2 SV=1
Evalue: 0.0 | Bitscore: 657
Identities = 312/419 (74%), Positives = 345/419 (82%)
SwissP
Show Blast
Q9MT28 RecName: Full=Threonine synthase, chloroplastic; Short=TS; Flags: Precursor
Evalue: 0.0 | Bitscore: 655
Identities = 334/420 (79%), Positives = 370/420 (88%), Gaps = 0/420 (0%)
NCBI
Show Blast
XP_001779566.1 predicted protein [Physcomitrella patens subsp. patens]
Evalue: 0.0 | Bitscore: 649
Identities = 331/422 (78%), Positives = 371/422 (87%), Gaps = 1/422 (0%)
NCBI
Show Blast
XP_002285366.1 PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 0.0 | Bitscore: 646
Identities = 330/428 (77%), Positives = 368/428 (85%), Gaps = 0/428 (0%)
NCBI
Show Blast
XP_002329027.1 predicted protein [Populus trichocarpa]
Evalue: 0.0 | Bitscore: 646
Identities = 328/433 (75%), Positives = 369/433 (85%), Gaps = 0/433 (0%)
NCBI
Show Blast
XP_002279042.1 PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 0.0 | Bitscore: 646
Identities = 330/421 (78%), Positives = 364/421 (86%), Gaps = 0/421 (0%)
NCBI
Show Blast

Gene Structure 

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Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

CDS  

Locus ID
Ot04g01610
Redo Blast
CDS Length
1443 nucleotides
CDS Sequence

Protein 

Locus ID
Ot04g01610
Redo Blast
Protein Length
461 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a