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Ostreococcus tauri


Gene ID
Ot03g02120
Locus
Ot03g02120
Functional Description
putative phosphatidic acid phosphatase (ISS)
Gene Type
protein-coding gene
Contig
chrom03
Last Modified On
08 March 2010 22h54
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
putative phosphatidic acid phosphatase (ISS)
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
1.
membrane

Molecular Function
1.
catalytic activity

Biological Process
n/a

Protein Domains 


Domain IDDescriptionDatabase
IPR007110 Immunoglobulin-like InterPro
PTHR10165 LIPID PHOSPHATE PHOSPHATASE-RELATED HMMPanther
IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
CAL52864.1 putative phosphatidic acid phosphatase (ISS) [Ostreococcus tauri]
Evalue: 6e-148 | Bitscore: 527
Identities = 291/291 (100%), Positives = 291/291 (100%), Gaps = 0/291 (0%)
NCBI
Show Blast
XP_001416918.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 9e-100 | Bitscore: 367
Identities = 167/240 (69%), Positives = 195/240 (81%), Gaps = 3/240 (1%)
NCBI
Show Blast
XP_002500517.1 predicted protein [Micromonas sp. RCC299]
Evalue: 2e-40 | Bitscore: 170
Identities = 100/232 (43%), Positives = 140/232 (60%), Gaps = 10/232 (4%)
NCBI
Show Blast
XP_002528074.1 phosphatidic acid phosphatase, putative [Ricinus communis]
Evalue: 3e-38 | Bitscore: 162
Identities = 93/232 (40%), Positives = 129/232 (55%), Gaps = 11/232 (4%)
NCBI
Show Blast
NP_172961.1 LPP2 (LIPID PHOSPHATE PHOSPHATASE 2); acid phosphatase/ phosphatidate phosphatase [Arabidopsis thaliana]
Evalue: 3e-37 | Bitscore: 159
Identities = 94/237 (39%), Positives = 135/237 (56%), Gaps = 10/237 (4%)
NCBI
Show Blast
AT1G15080.1 | Symbols: ATLPP2, LPP2, ATPAP2 | ATPAP2 (PHOSPHATIDIC ACID PHOSPHATASE 2); phosphatidate phosphatase |
Evalue: 6e-39 | Bitscore: 157
Identities = 95/238 (39%), Positives = 139/238 (58%), Gaps = 14/238 (5%)
Tair
Show Blast
Q9XI60 Lipid phosphate phosphatase 2 OS=Arabidopsis thaliana GN=LPP2 PE=2 SV=1
Evalue: 6e-38 | Bitscore: 157
Identities = 95/238 (39%), Positives = 139/238 (58%), Gaps = 14/238 (5%)
SwissP
Show Blast
XP_002315917.1 predicted protein [Populus trichocarpa]
Evalue: 2e-36 | Bitscore: 157
Identities = 89/216 (41%), Positives = 121/216 (56%), Gaps = 10/216 (4%)
NCBI
Show Blast
AAF89579.1 phosphatidic acid phosphatase alpha [Vigna unguiculata]
Evalue: 7e-36 | Bitscore: 155
Identities = 87/215 (40%), Positives = 121/215 (56%), Gaps = 10/215 (4%)
NCBI
Show Blast
ACU18261.1 unknown [Glycine max]
Evalue: 7e-36 | Bitscore: 155
Identities = 85/214 (39%), Positives = 119/214 (55%), Gaps = 8/214 (3%)
NCBI
Show Blast

Gene Structure 

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Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

CDS  

Locus ID
Ot03g02120
Redo Blast
CDS Length
876 nucleotides
CDS Sequence

Protein 

Locus ID
Ot03g02120
Redo Blast
Protein Length
292 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

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EST IDCTZ23-D10.y1d-s Support ModelN More Info
CommentEST is not matching the given gene model. EST is mapped on the opposite strand