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Ostreococcus tauri


Gene ID
Ot03g01020
Locus
Ot03g01020
Functional Description
Dihydrolipoamide succinyltransferase (2-oxoglutarate dehydrogenase, E2 subunit) (ISS)
Gene Type
protein-coding gene
Contig
chrom03
Last Modified On
08 March 2010 22h35
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
Dihydrolipoamide succinyltransferase (2-oxoglutarate dehydrogenase, E2 subunit) (ISS)
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
n/a
Biological Process
1.
metabolic process

 
Comment
Unknown GO IDs: GO:0008415

Protein Domains 


Domain IDDescriptionDatabase
PTHR23151 DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED HMMPanther
IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain InterPro
G3DSA:3.30.559.10 no description Gene3D
SSF52777 CoA-dependent acyltransferases superfamily

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
CAL52754.1 Dihydrolipoamide succinyltransferase (2-oxoglutarate dehydrogenase, E2 subunit) (ISS) [Ostreococcus tauri]
Evalue: 2e-121 | Bitscore: 438
Identities = 213/213 (100%), Positives = 213/213 (100%), Gaps = 0/213 (0%)
NCBI
Show Blast
XP_001416577.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 7e-113 | Bitscore: 409
Identities = 194/213 (91%), Positives = 207/213 (97%), Gaps = 0/213 (0%)
NCBI
Show Blast
EEH53256.1 predicted protein [Micromonas pusilla CCMP1545]
Evalue: 2e-88 | Bitscore: 328
Identities = 160/212 (75%), Positives = 177/212 (83%), Gaps = 1/212 (0%)
NCBI
Show Blast
XP_002501356.1 predicted protein [Micromonas sp. RCC299]
Evalue: 1e-87 | Bitscore: 326
Identities = 158/212 (74%), Positives = 177/212 (83%), Gaps = 1/212 (0%)
NCBI
Show Blast
XP_001697507.1 dihydrolipoamide acetyltransferase [Chlamydomonas reinhardtii]
Evalue: 4e-63 | Bitscore: 244
Identities = 124/214 (57%), Positives = 158/214 (73%), Gaps = 3/214 (1%)
NCBI
Show Blast
XP_002445536.1 hypothetical protein SORBIDRAFT_07g021070 [Sorghum bicolor]
Evalue: 2e-60 | Bitscore: 235
Identities = 117/214 (54%), Positives = 148/214 (69%), Gaps = 1/214 (0%)
NCBI
Show Blast
NP_189215.1 LTA2; dihydrolipoyllysine-residue acetyltransferase [Arabidopsis thaliana]
Evalue: 4e-60 | Bitscore: 234
Identities = 118/214 (55%), Positives = 146/214 (68%), Gaps = 1/214 (0%)
NCBI
Show Blast
BAB01047.1 dihydrolipoamide S-acetyltransferase [Arabidopsis thaliana]
Evalue: 6e-60 | Bitscore: 234
Identities = 118/214 (55%), Positives = 146/214 (68%), Gaps = 1/214 (0%)
NCBI
Show Blast
AAK76609.2 putative dihydrolipoamide S-acetyltransferase [Arabidopsis thaliana]
Evalue: 1e-59 | Bitscore: 233
Identities = 118/214 (55%), Positives = 146/214 (68%), Gaps = 1/214 (0%)
NCBI
Show Blast
ACF86543.1 unknown [Zea mays]
Evalue: 1e-57 | Bitscore: 226
Identities = 121/214 (56%), Positives = 149/214 (69%), Gaps = 1/214 (0%)
NCBI
Show Blast

Gene Structure 

View in GenomeView|View in Artemini


Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
+
Structure Quality
2

CDS  

Locus ID
Ot03g01020
Redo Blast
CDS Length
642 nucleotides
CDS Sequence

Protein 

Locus ID
Ot03g01020
Redo Blast
Protein Length
214 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a