- Gene ID
- Ot02g05010
- Locus
- Ot02g05010
- Functional Description
- Anthranilate synthase component II (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom02
- Last Modified On
- 08 March 2010 21h38
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- Anthranilate synthase component II (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
indole-3-glycerol-phosphate synthase activity
- Biological Process
-
1.
tryptophan metabolic process
Protein Domains
| Domain ID | Description | Database |
|---|
|
IPR013785 |
Aldolase-type TIM barrel |
InterPro |
|
IPR011060 |
Ribulose-phosphate binding barrel |
InterPro |
|
IPR001468 |
Indole-3-glycerol phosphate synthase, conserved site |
InterPro |
|
PTHR22854 |
TRYPTOPHAN BIOSYNTHESIS PROTEIN |
HMMPanther |
|
IPR013798 |
Indole-3-glycerol phosphate synthase |
InterPro |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL52376.1 |
Anthranilate synthase component II (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 654
Identities = 320/320 (100%), Positives = 320/320 (100%), Gaps = 0/320 (0%) |
NCBI |
Show Blast
|
| XP_001418562.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 1e-176 | Bitscore: 622
Identities = 306/320 (95%), Positives = 311/320 (97%), Gaps = 0/320 (0%) |
NCBI |
Show Blast
|
| EEH53802.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 5e-144 | Bitscore: 514
Identities = 256/316 (81%), Positives = 275/316 (87%), Gaps = 1/316 (0%) |
NCBI |
Show Blast
|
| XP_002499824.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 8e-143 | Bitscore: 510
Identities = 251/316 (79%), Positives = 280/316 (88%), Gaps = 1/316 (0%) |
NCBI |
Show Blast
|
| XP_001782424.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 2e-99 | Bitscore: 366
Identities = 192/332 (57%), Positives = 236/332 (71%), Gaps = 32/332 (9%) |
NCBI |
Show Blast
|
| ACJ84388.1 |
unknown [Medicago truncatula]
Evalue: 8e-98 | Bitscore: 361
Identities = 183/315 (58%), Positives = 230/315 (73%), Gaps = 13/315 (4%) |
NCBI |
Show Blast
|
| XP_002265275.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 3e-97 | Bitscore: 359
Identities = 185/314 (58%), Positives = 231/314 (73%), Gaps = 13/314 (4%) |
NCBI |
Show Blast
|
| CBI28465.1 |
unnamed protein product [Vitis vinifera]
Evalue: 4e-97 | Bitscore: 358
Identities = 185/314 (58%), Positives = 231/314 (73%), Gaps = 13/314 (4%) |
NCBI |
Show Blast
|
| ABK24385.1 |
unknown [Picea sitchensis]
Evalue: 2e-96 | Bitscore: 356
Identities = 181/317 (57%), Positives = 229/317 (72%), Gaps = 13/317 (4%) |
NCBI |
Show Blast
|
| XP_002532209.1 |
tryptophan biosynthesis protein, trpc, putative [Ricinus communis]
Evalue: 1e-95 | Bitscore: 354
Identities = 179/314 (57%), Positives = 231/314 (73%), Gaps = 13/314 (4%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAH23903.1 |
unknown [environmental sequence]
Evalue: 9e-72 | Bitscore: 270
Identities = 152/297 (51%), Positives = 202/297 (68%), Gaps = 22/297 (7%) |
GOS |
Show Blast
|
| EAK29258.1 |
unknown [environmental sequence]
Evalue: 2e-70 | Bitscore: 265
Identities = 149/312 (47%), Positives = 210/312 (67%), Gaps = 22/312 (7%) |
GOS |
Show Blast
|
| EAG05647.1 |
unknown [environmental sequence]
Evalue: 5e-68 | Bitscore: 257
Identities = 145/295 (49%), Positives = 200/295 (67%), Gaps = 22/295 (7%) |
GOS |
Show Blast
|
| EAH20262.1 |
unknown [environmental sequence]
Evalue: 7e-63 | Bitscore: 240
Identities = 134/255 (52%), Positives = 175/255 (68%), Gaps = 21/255 (8%) |
GOS |
Show Blast
|
| EAJ42100.1 |
unknown [environmental sequence]
Evalue: 3e-62 | Bitscore: 238
Identities = 139/312 (44%), Positives = 195/312 (62%), Gaps = 20/312 (6%) |
GOS |
Show Blast
|
| EAK79154.1 |
unknown [environmental sequence]
Evalue: 8e-62 | Bitscore: 237
Identities = 135/312 (43%), Positives = 199/312 (63%), Gaps = 20/312 (6%) |
GOS |
Show Blast
|
| EAE89891.1 |
unknown [environmental sequence]
Evalue: 3e-60 | Bitscore: 231
Identities = 128/278 (46%), Positives = 185/278 (66%), Gaps = 6/278 (2%) |
GOS |
Show Blast
|
| EAC06932.1 |
unknown [environmental sequence]
Evalue: 1e-59 | Bitscore: 229
Identities = 132/301 (43%), Positives = 190/301 (63%), Gaps = 20/301 (6%) |
GOS |
Show Blast
|
| EAG59233.1 |
unknown [environmental sequence]
Evalue: 1e-56 | Bitscore: 219
Identities = 123/264 (46%), Positives = 172/264 (65%), Gaps = 6/264 (2%) |
GOS |
Show Blast
|
| EAH67142.1 |
unknown [environmental sequence]
Evalue: 7e-54 | Bitscore: 210
Identities = 118/255 (46%), Positives = 164/255 (64%), Gaps = 19/255 (7%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL52376.1 |
Anthranilate synthase component II (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 654
Identities = 320/320 (100%), Positives = 320/320 (100%), Gaps = 0/320 (0%) |
NCBI |
Show Blast
|
| XP_001418562.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 1e-176 | Bitscore: 622
Identities = 306/320 (95%), Positives = 311/320 (97%), Gaps = 0/320 (0%) |
NCBI |
Show Blast
|
| EEH53802.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 5e-144 | Bitscore: 514
Identities = 256/316 (81%), Positives = 275/316 (87%), Gaps = 1/316 (0%) |
NCBI |
Show Blast
|
| XP_002499824.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 8e-143 | Bitscore: 510
Identities = 251/316 (79%), Positives = 280/316 (88%), Gaps = 1/316 (0%) |
NCBI |
Show Blast
|
| XP_001782424.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 2e-99 | Bitscore: 366
Identities = 192/332 (57%), Positives = 236/332 (71%), Gaps = 32/332 (9%) |
NCBI |
Show Blast
|
| ACJ84388.1 |
unknown [Medicago truncatula]
Evalue: 8e-98 | Bitscore: 361
Identities = 183/315 (58%), Positives = 230/315 (73%), Gaps = 13/315 (4%) |
NCBI |
Show Blast
|
| XP_002265275.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 3e-97 | Bitscore: 359
Identities = 185/314 (58%), Positives = 231/314 (73%), Gaps = 13/314 (4%) |
NCBI |
Show Blast
|
| CBI28465.1 |
unnamed protein product [Vitis vinifera]
Evalue: 4e-97 | Bitscore: 358
Identities = 185/314 (58%), Positives = 231/314 (73%), Gaps = 13/314 (4%) |
NCBI |
Show Blast
|
| ABK24385.1 |
unknown [Picea sitchensis]
Evalue: 2e-96 | Bitscore: 356
Identities = 181/317 (57%), Positives = 229/317 (72%), Gaps = 13/317 (4%) |
NCBI |
Show Blast
|
| XP_002532209.1 |
tryptophan biosynthesis protein, trpc, putative [Ricinus communis]
Evalue: 1e-95 | Bitscore: 354
Identities = 179/314 (57%), Positives = 231/314 (73%), Gaps = 13/314 (4%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| No hits found against database Self with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| P49572 |
Indole-3-glycerol phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=At2g04400 PE=2 SV=2
Evalue: 1e-91 | Bitscore: 337
Identities = 178/316 (56%), Positives = 227/316 (71%), Gaps = 14/316 (4%) |
SwissP |
Show Blast
|
| Q55508 |
Indole-3-glycerol phosphate synthase OS=Synechocystis sp. (strain PCC 6803) GN=trpC PE=3 SV=1
Evalue: 3e-80 | Bitscore: 298
Identities = 168/313 (53%), Positives = 216/313 (69%), Gaps = 20/313 (6%) |
SwissP |
Show Blast
|
| B1WQE4 |
Indole-3-glycerol phosphate synthase OS=Cyanothece sp. (strain ATCC 51142) GN=trpC PE=3 SV=1
Evalue: 6e-76 | Bitscore: 284
Identities = 162/312 (51%), Positives = 210/312 (67%), Gaps = 20/312 (6%) |
SwissP |
Show Blast
|
| B7K0H0 |
Indole-3-glycerol phosphate synthase OS=Cyanothece sp. (strain PCC 8801) GN=trpC PE=3 SV=1
Evalue: 2e-75 | Bitscore: 283
Identities = 159/313 (50%), Positives = 208/313 (66%), Gaps = 20/313 (6%) |
SwissP |
Show Blast
|
| B0CEU2 |
Indole-3-glycerol phosphate synthase OS=Acaryochloris marina (strain MBIC 11017) GN=trpC PE=3 SV=1
Evalue: 1e-74 | Bitscore: 280
Identities = 156/302 (51%), Positives = 205/302 (67%), Gaps = 22/302 (7%) |
SwissP |
Show Blast
|
| B0JTM2 |
Indole-3-glycerol phosphate synthase OS=Microcystis aeruginosa (strain NIES-843) GN=trpC PE=3 SV=1
Evalue: 2e-72 | Bitscore: 273
Identities = 152/274 (55%), Positives = 196/274 (71%), Gaps = 6/274 (2%) |
SwissP |
Show Blast
|
| Q10ZM7 |
Indole-3-glycerol phosphate synthase OS=Trichodesmium erythraeum (strain IMS101) GN=trpC PE=3 SV=1
Evalue: 6e-72 | Bitscore: 271
Identities = 155/312 (49%), Positives = 206/312 (66%), Gaps = 20/312 (6%) |
SwissP |
Show Blast
|
| Q7TTU3 |
Indole-3-glycerol phosphate synthase OS=Synechococcus sp. (strain WH8102) GN=trpC PE=3 SV=1
Evalue: 3e-71 | Bitscore: 268
Identities = 151/302 (50%), Positives = 207/302 (68%), Gaps = 22/302 (7%) |
SwissP |
Show Blast
|
| Q3AL94 |
Indole-3-glycerol phosphate synthase OS=Synechococcus sp. (strain CC9605) GN=trpC PE=3 SV=1
Evalue: 6e-71 | Bitscore: 268
Identities = 152/312 (48%), Positives = 212/312 (67%), Gaps = 22/312 (7%) |
SwissP |
Show Blast
|
| B8HP79 |
Indole-3-glycerol phosphate synthase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=trpC PE=3 SV=1
Evalue: 2e-70 | Bitscore: 266
Identities = 158/305 (51%), Positives = 204/305 (66%), Gaps = 21/305 (6%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT5G48220.1 |
| Symbols: | indole-3-glycerol phosphate synthase, putative | chr5:19567156-19569272 FORWARD
Evalue: 2e-94 | Bitscore: 342
Identities = 178/315 (56%), Positives = 229/315 (72%), Gaps = 13/315 (4%) |
Tair |
Show Blast
|
| AT5G48220.2 |
| Symbols: | indole-3-glycerol phosphate synthase, putative | chr5:19567665-19569272 FORWARD
Evalue: 3e-94 | Bitscore: 342
Identities = 178/315 (56%), Positives = 229/315 (72%), Gaps = 13/315 (4%) |
Tair |
Show Blast
|
| AT2G04400.1 |
| Symbols: | indole-3-glycerol phosphate synthase (IGPS) | chr2:1531205-1533575 FORWARD
Evalue: 1e-92 | Bitscore: 337
Identities = 178/316 (56%), Positives = 227/316 (71%), Gaps = 14/316 (4%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
| EST ID | CTZ18-H09.x1d-t |
Support Model | Y |
More Info |
| Comment | EST is mapped on the opposite strand of the predicted model |
| Mapping Location | 581405..582172 |
Strand + |
|
