- Gene ID
- Ot02g04220
- Locus
- Ot02g04220
- Functional Description
- If4E eukaryotic translation initiation factor 4E (IC)
- Gene Type
- protein-coding gene
- Contig
- chrom02
- Last Modified On
- 08 March 2010 21h25
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- If4E eukaryotic translation initiation factor 4E (IC)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
1.
cytoplasm
- Molecular Function
-
1.
RNA binding
2.
translation initiation factor activity
- Biological Process
-
1.
translational initiation
Protein Domains
Domain ID | Description | Database |
IPR001040 |
Eukaryotic translation initiation factor 4E (eIF-4E) |
InterPro |
IPR019770 |
Eukaryotic translation initiation factor 4E (eIF-4E), conserved site |
InterPro |
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
P29557 |
Eukaryotic translation initiation factor 4E-1 OS=Triticum aestivum PE=1 SV=3
Evalue: 5e-33 | Bitscore: 139 Identities = 70/129 (54%), Positives = 90/129 (69%), Gaps = 6/129 (4%) |
SwissP |
Show Blast
|
P48599 |
Eukaryotic translation initiation factor 4E-1 OS=Oryza sativa subsp. japonica GN=Os01g0970400 PE=2 SV=1
Evalue: 8e-33 | Bitscore: 138 Identities = 70/129 (54%), Positives = 91/129 (70%), Gaps = 6/129 (4%) |
SwissP |
Show Blast
|
O81481 |
Eukaryotic translation initiation factor 4E-1 OS=Zea mays PE=2 SV=1
Evalue: 9e-33 | Bitscore: 138 Identities = 70/129 (54%), Positives = 91/129 (70%), Gaps = 6/129 (4%) |
SwissP |
Show Blast
|
AT4G18040.1 |
| Symbols: EIF4E, LSP1, CUM1, AT.EIF4E1 | EIF4E (EUKARYOTIC TRANSLATION INITATION FACTOR 4E, LOSS-OF-SUSCEPTIBILITY
Evalue: 2e-33 | Bitscore: 137 Identities = 67/127 (52%), Positives = 88/127 (69%), Gaps = 6/127 (4%) |
Tair |
Show Blast
|
O23252 |
Eukaryotic translation initiation factor 4E-1 OS=Arabidopsis thaliana GN=EIF4E1 PE=2 SV=1
Evalue: 2e-32 | Bitscore: 137 Identities = 67/127 (52%), Positives = 88/127 (69%), Gaps = 6/127 (4%) |
SwissP |
Show Blast
|
Q9C7P2 |
Eukaryotic translation initiation factor 4E-5 OS=Arabidopsis thaliana GN=At1g29590 PE=2 SV=2
Evalue: 8e-31 | Bitscore: 132 Identities = 63/128 (49%), Positives = 89/128 (69%), Gaps = 6/128 (4%) |
SwissP |
Show Blast
|
AT1G29590.1 |
| Symbols: | eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding
Evalue: 2e-31 | Bitscore: 130 Identities = 63/128 (49%), Positives = 89/128 (69%), Gaps = 6/128 (4%) |
Tair |
Show Blast
|
AT1G29550.1 |
| Symbols: | eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding
Evalue: 4e-31 | Bitscore: 129 Identities = 64/128 (50%), Positives = 87/128 (67%), Gaps = 6/128 (4%) |
Tair |
Show Blast
|
Q9C7P6 |
Putative eukaryotic translation initiation factor 4E-4 OS=Arabidopsis thaliana GN=At1g29550 PE=2 SV=1
Evalue: 4e-30 | Bitscore: 129 Identities = 64/128 (50%), Positives = 87/128 (67%), Gaps = 6/128 (4%) |
SwissP |
Show Blast
|
Q03389 |
Eukaryotic translation initiation factor 4E-2 OS=Triticum aestivum PE=2 SV=1
Evalue: 3e-27 | Bitscore: 120 Identities = 61/126 (48%), Positives = 83/126 (65%), Gaps = 5/126 (3%) |
SwissP |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
EAB62544.1 |
unknown [environmental sequence]
Evalue: 6e-07 | Bitscore: 52 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 6/79 (7%) |
GOS |
Show Blast
|
EAH26668.1 |
unknown [environmental sequence]
Evalue: 1e-05 | Bitscore: 48 Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 8/78 (10%) |
GOS |
Show Blast
|
EAF15353.1 |
unknown [environmental sequence]
Evalue: 0.0006 | Bitscore: 42 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 12/92 (13%) |
GOS |
Show Blast
|
No hits found against database NCBI with an e-value better than 1e-3. |
No hits found against database O.RCC809 with an e-value better than 1e-3. |
No hits found against database O.luci with an e-value better than 1e-3. |
No hits found against database Self with an e-value better than 1e-3. |
ProteinID | Description / BlastScore | Database | Actions |
P29557 |
Eukaryotic translation initiation factor 4E-1 OS=Triticum aestivum PE=1 SV=3
Evalue: 5e-33 | Bitscore: 139 Identities = 70/129 (54%), Positives = 90/129 (69%), Gaps = 6/129 (4%) |
SwissP |
Show Blast
|
P48599 |
Eukaryotic translation initiation factor 4E-1 OS=Oryza sativa subsp. japonica GN=Os01g0970400 PE=2 SV=1
Evalue: 8e-33 | Bitscore: 138 Identities = 70/129 (54%), Positives = 91/129 (70%), Gaps = 6/129 (4%) |
SwissP |
Show Blast
|
O81481 |
Eukaryotic translation initiation factor 4E-1 OS=Zea mays PE=2 SV=1
Evalue: 9e-33 | Bitscore: 138 Identities = 70/129 (54%), Positives = 91/129 (70%), Gaps = 6/129 (4%) |
SwissP |
Show Blast
|
O23252 |
Eukaryotic translation initiation factor 4E-1 OS=Arabidopsis thaliana GN=EIF4E1 PE=2 SV=1
Evalue: 2e-32 | Bitscore: 137 Identities = 67/127 (52%), Positives = 88/127 (69%), Gaps = 6/127 (4%) |
SwissP |
Show Blast
|
Q9C7P2 |
Eukaryotic translation initiation factor 4E-5 OS=Arabidopsis thaliana GN=At1g29590 PE=2 SV=2
Evalue: 8e-31 | Bitscore: 132 Identities = 63/128 (49%), Positives = 89/128 (69%), Gaps = 6/128 (4%) |
SwissP |
Show Blast
|
Q9C7P6 |
Putative eukaryotic translation initiation factor 4E-4 OS=Arabidopsis thaliana GN=At1g29550 PE=2 SV=1
Evalue: 4e-30 | Bitscore: 129 Identities = 64/128 (50%), Positives = 87/128 (67%), Gaps = 6/128 (4%) |
SwissP |
Show Blast
|
Q03389 |
Eukaryotic translation initiation factor 4E-2 OS=Triticum aestivum PE=2 SV=1
Evalue: 3e-27 | Bitscore: 120 Identities = 61/126 (48%), Positives = 83/126 (65%), Gaps = 5/126 (3%) |
SwissP |
Show Blast
|
P48600 |
Eukaryotic translation initiation factor 4E-2 OS=Oryza sativa subsp. japonica GN=Os10g0467600 PE=2 SV=2
Evalue: 4e-27 | Bitscore: 119 Identities = 62/129 (48%), Positives = 83/129 (64%), Gaps = 5/129 (3%) |
SwissP |
Show Blast
|
O81482 |
Eukaryotic translation initiation factor 4E-2 OS=Zea mays PE=2 SV=1
Evalue: 3e-26 | Bitscore: 117 Identities = 61/126 (48%), Positives = 82/126 (65%), Gaps = 5/126 (3%) |
SwissP |
Show Blast
|
A6NMX2 |
Eukaryotic translation initiation factor 4E type 1B OS=Homo sapiens GN=EIF4E1B PE=2 SV=3
Evalue: 1e-24 | Bitscore: 111 Identities = 57/130 (43%), Positives = 81/130 (62%), Gaps = 2/130 (1%) |
SwissP |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
AT4G18040.1 |
| Symbols: EIF4E, LSP1, CUM1, AT.EIF4E1 | EIF4E (EUKARYOTIC TRANSLATION INITATION FACTOR 4E, LOSS-OF-SUSCEPTIBILITY
Evalue: 2e-33 | Bitscore: 137 Identities = 67/127 (52%), Positives = 88/127 (69%), Gaps = 6/127 (4%) |
Tair |
Show Blast
|
AT1G29590.1 |
| Symbols: | eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding
Evalue: 2e-31 | Bitscore: 130 Identities = 63/128 (49%), Positives = 89/128 (69%), Gaps = 6/128 (4%) |
Tair |
Show Blast
|
AT1G29550.1 |
| Symbols: | eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding
Evalue: 4e-31 | Bitscore: 129 Identities = 64/128 (50%), Positives = 87/128 (67%), Gaps = 6/128 (4%) |
Tair |
Show Blast
|
AT5G35620.1 |
| Symbols: EIF(ISO)4E, LSP, LSP1 | LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUSES); RNA binding / translation initiation
Evalue: 7e-25 | Bitscore: 108 Identities = 57/117 (48%), Positives = 79/117 (67%), Gaps = 5/117 (4%) |
Tair |
Show Blast
|
AT5G35620.2 |
| Symbols: EIF(ISO)4E, LSP, LSP1 | LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUSES); RNA binding / translation initiation
Evalue: 7e-20 | Bitscore: 92 Identities = 45/85 (52%), Positives = 59/85 (69%), Gaps = 3/85 (3%) |
Tair |
Show Blast
|
AT5G18110.1 |
| Symbols: NCBP | NCBP (NOVEL CAP-BINDING PROTEIN); RNA binding / translation initiation factor | chr5:5989107-5990590
Evalue: 5e-16 | Bitscore: 79 Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
EST ID | OtEST00369 |
Support Model | Y |
More Info |
Mapping Location | 447248..447708 |
Strand + |
|