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Ostreococcus tauri


Gene ID
Ot01g05130
Locus
Ot01g05130
Functional Description
target of rapamycin protein (TOR) (ISS)
Gene Type
protein-coding gene
Contig
chrom01
Last Modified On
08 March 2010 20h13
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
target of rapamycin protein (TOR) (ISS)
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
1.
phosphotransferase activity, alcohol group as acceptor

Biological Process
n/a

Protein Domains 


Domain IDDescriptionDatabase
G3DSA:3.30.1010.10 no description Gene3D
IPR000403 Phosphatidylinositol 3-/4-kinase, catalytic InterPro
PF11865 DUF3385 HMMPfam
IPR011989 Armadillo-like helical InterPro
IPR009076 FKBP12-rapamycin-associated protein, FKBP12-rapamycin-binding InterPro
IPR011009 Protein kinase-like domain InterPro
IPR003151 PIK-related kinase, FAT InterPro
IPR016024 Armadillo-type fold InterPro
IPR014009 PIK-related kinase InterPro
PTHR11139 ATAXIA TELANGIECTASIA MUTATED (ATM)-RELATED HMMPanther
IPR018936 Phosphatidylinositol 3/4-kinase, conserved site InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
CAL50428.1 target of rapamycin protein (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 4495
Identities = 2248/2248 (100%), Positives = 2248/2248 (100%), Gaps = 0/2248 (0%)
NCBI
Show Blast
XP_001415633.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 2409
Identities = 1223/1516 (80%), Positives = 1323/1516 (87%), Gaps = 71/1516 (4%)
NCBI
Show Blast
XP_002506903.1 target of rapamycin kinase [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 2204
Identities = 1248/2358 (52%), Positives = 1536/2358 (65%), Gaps = 266/2358 (11%)
NCBI
Show Blast
EEH53026.1 target of rapamycin kinase [Micromonas pusilla CCMP1545]
Evalue: 0.0 | Bitscore: 2132
Identities = 1213/2335 (51%), Positives = 1528/2335 (65%), Gaps = 283/2335 (12%)
NCBI
Show Blast
NP_175425.2 TOR (TARGET OF RAPAMYCIN); 1-phosphatidylinositol-3-kinase/ protein binding [Arabidopsis thaliana]
Evalue: 0.0 | Bitscore: 1611
Identities = 975/2282 (42%), Positives = 1359/2282 (59%), Gaps = 264/2282 (11%)
NCBI
Show Blast
XP_002275591.1 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]
Evalue: 0.0 | Bitscore: 1584
Identities = 983/2330 (42%), Positives = 1356/2330 (58%), Gaps = 285/2330 (12%)
NCBI
Show Blast
AT1G50030.1 | Symbols: TOR | TOR (TARGET OF RAPAMYCIN) | chr1:18526294-18543287 REVERSE
Evalue: 0.0 | Bitscore: 1582
Identities = 948/2279 (41%), Positives = 1324/2279 (58%), Gaps = 258/2279 (11%)
Tair
Show Blast
NP_001117459.1 TOR (TARGET OF RAPAMYCIN); 1-phosphatidylinositol-3-kinase/ protein binding [Arabidopsis thaliana]
Evalue: 0.0 | Bitscore: 1579
Identities = 963/2282 (42%), Positives = 1343/2282 (58%), Gaps = 291/2282 (12%)
NCBI
Show Blast
XP_002439640.1 hypothetical protein SORBIDRAFT_09g017790 [Sorghum bicolor]
Evalue: 0.0 | Bitscore: 1576
Identities = 965/2328 (41%), Positives = 1347/2328 (57%), Gaps = 274/2328 (11%)
NCBI
Show Blast
XP_002313929.1 predicted protein [Populus trichocarpa]
Evalue: 0.0 | Bitscore: 1576
Identities = 968/2335 (41%), Positives = 1359/2335 (58%), Gaps = 290/2335 (12%)
NCBI
Show Blast

Gene Structure 

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Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
+
Structure Quality
2

CDS  

Locus ID
Ot01g05130
Redo Blast
CDS Length
6747 nucleotides
CDS Sequence

Protein 

Locus ID
Ot01g05130
Redo Blast
Protein Length
2222 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

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EST IDCH1_TOR Support ModelN More Info
CommentEST is not matching the given gene model.