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Ostreococcus tauri


Gene ID
Ot01g04540
Locus
Ot01g04540
Functional Description
NADP/FAD dependent oxidoreductase (ISS)
Gene Type
protein-coding gene
Contig
chrom01
Last Modified On
08 March 2010 20h04
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
NADP/FAD dependent oxidoreductase (ISS)
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
1.
electron transfer activity

2.
oxidoreductase activity

Biological Process
1.
obsolete electron transport

2.
obsolete oxidation-reduction process

Protein Domains 


Domain IDDescriptionDatabase
IPR017927 Ferredoxin reductase-type FAD-binding domain InterPro
IPR001094 Flavodoxin-like InterPro
SSF52218 Flavoproteins superfamily
G3DSA:2.40.30.10 no description Gene3D
IPR008254 Flavodoxin/nitric oxide synthase InterPro
SSF52343 Ferredoxin reductase-like, C-terminal NADP-linked domain superfamily
IPR001433 Oxidoreductase FAD/NAD(P)-binding InterPro
G3DSA:3.40.50.80 no description Gene3D
IPR017938 Riboflavin synthase-like beta-barrel InterPro
G3DSA:3.40.50.360 no description Gene3D
IPR003097 FAD-binding, type 1 InterPro
PTHR19384 FLAVODOXIN-RELATED HMMPanther
IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
CAL50368.1 NADPH-cytochrome P-450 reductase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1242
Identities = 626/626 (100%), Positives = 626/626 (100%), Gaps = 0/626 (0%)
NCBI
Show Blast
XP_001415936.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 971
Identities = 490/563 (87%), Positives = 520/563 (92%), Gaps = 0/563 (0%)
NCBI
Show Blast
EAK69029.1 unknown [environmental sequence]
Evalue: 0.0 | Bitscore: 782
Identities = 397/489 (81%), Positives = 427/489 (87%)
GOS
Show Blast
XP_002507692.1 predicted protein [Micromonas sp. RCC299]
Evalue: 9e-172 | Bitscore: 608
Identities = 330/647 (51%), Positives = 430/647 (66%), Gaps = 35/647 (5%)
NCBI
Show Blast
EEH59418.1 predicted protein [Micromonas pusilla CCMP1545]
Evalue: 1e-163 | Bitscore: 581
Identities = 320/629 (50%), Positives = 410/629 (65%), Gaps = 29/629 (4%)
NCBI
Show Blast
NP_001063914.1 Os09g0558900 [Oryza sativa (japonica cultivar-group)]
Evalue: 4e-139 | Bitscore: 499
Identities = 284/638 (44%), Positives = 377/638 (59%), Gaps = 47/638 (7%)
NCBI
Show Blast
EAZ10065.1 hypothetical protein OsI_32371 [Oryza sativa Indica Group]
Evalue: 5e-139 | Bitscore: 499
Identities = 284/638 (44%), Positives = 377/638 (59%), Gaps = 47/638 (7%)
NCBI
Show Blast
AAZ39648.1 cytochrome P450 NADPH-reductase [Petunia x hybrida]
Evalue: 5e-139 | Bitscore: 499
Identities = 279/630 (44%), Positives = 385/630 (61%), Gaps = 50/630 (7%)
NCBI
Show Blast
CAA89837.3 NADPH-cytochrome P450 reductase [Pseudotsuga menziesii]
Evalue: 9e-139 | Bitscore: 498
Identities = 283/638 (44%), Positives = 392/638 (61%), Gaps = 56/638 (8%)
NCBI
Show Blast
ACF17649.1 putative cytochrome reductase [Capsicum annuum]
Evalue: 5e-138 | Bitscore: 495
Identities = 274/630 (43%), Positives = 383/630 (60%), Gaps = 50/630 (7%)
NCBI
Show Blast

Gene Structure 

View in GenomeView|View in Artemini


Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

CDS  

Locus ID
Ot01g04540
Redo Blast
CDS Length
1884 nucleotides
CDS Sequence

Protein 

Locus ID
Ot01g04540
Redo Blast
Protein Length
628 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a