- Gene ID
- Ot17g02400
- Locus
- Ot17g02400
- Functional Description
- pantoate--beta-alanine ligase [Oryza sativa (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom17
- Last Modified On
- 09 March 2010 14h29
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- pantoate--beta-alanine ligase [Oryza sativa (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
pantoate-beta-alanine ligase activity
- Biological Process
-
1.
pantothenate biosynthetic process
Protein Domains
| Domain ID | Description | Database |
|---|
|
IPR014729 |
Rossmann-like alpha/beta/alpha sandwich fold |
InterPro |
|
IPR003721 |
Pantoate-beta-alanine ligase |
InterPro |
|
SSF52374 |
Nucleotidylyl transferase |
superfamily |
|
G3DSA:3.30.1300.10 |
no description |
Gene3D |
|
PTHR21299 |
CYTIDYLATE KINASE/PANTOATE-BETA-ALANINE LIGASE |
HMMPanther |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL57967.1 |
pantoate--beta-alanine ligase (ISS) [Ostreococcus tauri]
Evalue: 4e-166 | Bitscore: 587
Identities = 286/286 (100%), Positives = 286/286 (100%), Gaps = 0/286 (0%) |
NCBI |
Show Blast
|
| CAL55425.1 |
pantoate--beta-alanine ligase (ISS) [Ostreococcus tauri]
Evalue: 6e-158 | Bitscore: 560
Identities = 272/273 (99%), Positives = 272/273 (99%), Gaps = 0/273 (0%) |
NCBI |
Show Blast
|
| Ot09g02660 |
chrom09.0001 [395834..396755,396814..396896]
Evalue: 1e-152 | Bitscore: 531
Identities = 272/274 (99%), Positives = 272/274 (99%) |
Self |
Show Blast
|
| XP_001419794.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 1e-100 | Bitscore: 370
Identities = 198/288 (68%), Positives = 222/288 (77%), Gaps = 8/288 (2%) |
NCBI |
Show Blast
|
| EAH93957.1 |
unknown [environmental sequence]
Evalue: 3e-98 | Bitscore: 357
Identities = 190/285 (66%), Positives = 218/285 (76%), Gaps = 6/285 (2%) |
GOS |
Show Blast
|
| CAJ57403.1 |
putative pantoate-beta-alanine ligase [Physcomitrella patens subsp. patens]
Evalue: 3e-74 | Bitscore: 282
Identities = 142/275 (51%), Positives = 182/275 (66%), Gaps = 5/275 (1%) |
NCBI |
Show Blast
|
| XP_001755230.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 5e-74 | Bitscore: 282
Identities = 142/275 (51%), Positives = 182/275 (66%), Gaps = 5/275 (1%) |
NCBI |
Show Blast
|
| AAM62758.1 |
pantoate-beta-alanine ligase [Arabidopsis thaliana]
Evalue: 3e-72 | Bitscore: 276
Identities = 148/299 (49%), Positives = 183/299 (61%), Gaps = 25/299 (8%) |
NCBI |
Show Blast
|
| NP_199695.1 |
PANC (ARABIDOPSIS HOMOLOG OF BACTERIAL PANC); pantoate-beta-alanine ligase/ protein homodimerization [Arabidopsis thaliana]
Evalue: 1e-71 | Bitscore: 274
Identities = 147/299 (49%), Positives = 182/299 (60%), Gaps = 25/299 (8%) |
NCBI |
Show Blast
|
| NP_001051918.1 |
Os03g0851800 [Oryza sativa (japonica cultivar-group)] sp|O24210.2|PANC_ORYSJ RecName: Full=Pantoate--beta-alanine ligase; AltName: Full=Pantothenate
Evalue: 3e-71 | Bitscore: 273
Identities = 155/293 (52%), Positives = 191/293 (65%), Gaps = 24/293 (8%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAH93957.1 |
unknown [environmental sequence]
Evalue: 3e-98 | Bitscore: 357
Identities = 190/285 (66%), Positives = 218/285 (76%), Gaps = 6/285 (2%) |
GOS |
Show Blast
|
| EAJ60495.1 |
unknown [environmental sequence]
Evalue: 1e-52 | Bitscore: 206
Identities = 116/255 (45%), Positives = 154/255 (60%), Gaps = 4/255 (1%) |
GOS |
Show Blast
|
| EAH95477.1 |
unknown [environmental sequence]
Evalue: 7e-52 | Bitscore: 204
Identities = 117/267 (43%), Positives = 158/267 (59%), Gaps = 2/267 (0%) |
GOS |
Show Blast
|
| EAJ56715.1 |
unknown [environmental sequence]
Evalue: 7e-52 | Bitscore: 203
Identities = 117/267 (43%), Positives = 158/267 (59%), Gaps = 2/267 (0%) |
GOS |
Show Blast
|
| EAJ33888.1 |
unknown [environmental sequence]
Evalue: 6e-50 | Bitscore: 197
Identities = 108/255 (42%), Positives = 147/255 (57%), Gaps = 5/255 (1%) |
GOS |
Show Blast
|
| EAJ85451.1 |
unknown [environmental sequence]
Evalue: 5e-48 | Bitscore: 191
Identities = 110/253 (43%), Positives = 142/253 (56%), Gaps = 20/253 (7%) |
GOS |
Show Blast
|
| EAG28281.1 |
unknown [environmental sequence]
Evalue: 3e-46 | Bitscore: 184
Identities = 93/214 (43%), Positives = 131/214 (61%), Gaps = 4/214 (1%) |
GOS |
Show Blast
|
| EAC41720.1 |
unknown [environmental sequence]
Evalue: 1e-45 | Bitscore: 182
Identities = 92/221 (41%), Positives = 133/221 (60%), Gaps = 5/221 (2%) |
GOS |
Show Blast
|
| EAJ35959.1 |
unknown [environmental sequence]
Evalue: 8e-44 | Bitscore: 177
Identities = 106/281 (37%), Positives = 150/281 (53%), Gaps = 12/281 (4%) |
GOS |
Show Blast
|
| EAJ84745.1 |
unknown [environmental sequence]
Evalue: 2e-43 | Bitscore: 176
Identities = 119/280 (42%), Positives = 152/280 (54%), Gaps = 11/280 (3%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL57967.1 |
pantoate--beta-alanine ligase (ISS) [Ostreococcus tauri]
Evalue: 4e-166 | Bitscore: 587
Identities = 286/286 (100%), Positives = 286/286 (100%), Gaps = 0/286 (0%) |
NCBI |
Show Blast
|
| CAL55425.1 |
pantoate--beta-alanine ligase (ISS) [Ostreococcus tauri]
Evalue: 6e-158 | Bitscore: 560
Identities = 272/273 (99%), Positives = 272/273 (99%), Gaps = 0/273 (0%) |
NCBI |
Show Blast
|
| XP_001419794.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 1e-100 | Bitscore: 370
Identities = 198/288 (68%), Positives = 222/288 (77%), Gaps = 8/288 (2%) |
NCBI |
Show Blast
|
| CAJ57403.1 |
putative pantoate-beta-alanine ligase [Physcomitrella patens subsp. patens]
Evalue: 3e-74 | Bitscore: 282
Identities = 142/275 (51%), Positives = 182/275 (66%), Gaps = 5/275 (1%) |
NCBI |
Show Blast
|
| XP_001755230.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 5e-74 | Bitscore: 282
Identities = 142/275 (51%), Positives = 182/275 (66%), Gaps = 5/275 (1%) |
NCBI |
Show Blast
|
| AAM62758.1 |
pantoate-beta-alanine ligase [Arabidopsis thaliana]
Evalue: 3e-72 | Bitscore: 276
Identities = 148/299 (49%), Positives = 183/299 (61%), Gaps = 25/299 (8%) |
NCBI |
Show Blast
|
| NP_199695.1 |
PANC (ARABIDOPSIS HOMOLOG OF BACTERIAL PANC); pantoate-beta-alanine ligase/ protein homodimerization [Arabidopsis thaliana]
Evalue: 1e-71 | Bitscore: 274
Identities = 147/299 (49%), Positives = 182/299 (60%), Gaps = 25/299 (8%) |
NCBI |
Show Blast
|
| NP_001051918.1 |
Os03g0851800 [Oryza sativa (japonica cultivar-group)] sp|O24210.2|PANC_ORYSJ RecName: Full=Pantoate--beta-alanine ligase; AltName: Full=Pantothenate
Evalue: 3e-71 | Bitscore: 273
Identities = 155/293 (52%), Positives = 191/293 (65%), Gaps = 24/293 (8%) |
NCBI |
Show Blast
|
| XP_002466086.1 |
hypothetical protein SORBIDRAFT_01g000970 [Sorghum bicolor]
Evalue: 4e-71 | Bitscore: 272
Identities = 154/288 (53%), Positives = 180/288 (62%), Gaps = 22/288 (7%) |
NCBI |
Show Blast
|
| CBI37277.1 |
unnamed protein product [Vitis vinifera]
Evalue: 3e-69 | Bitscore: 266
Identities = 144/275 (52%), Positives = 181/275 (65%), Gaps = 8/275 (2%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot09g02660 |
chrom09.0001 [395834..396755,396814..396896]
Evalue: 1e-152 | Bitscore: 531
Identities = 272/274 (99%), Positives = 272/274 (99%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q9FKB3 |
Pantoate--beta-alanine ligase OS=Arabidopsis thaliana GN=At5g48840 PE=2 SV=1
Evalue: 7e-71 | Bitscore: 267
Identities = 147/299 (49%), Positives = 182/299 (60%), Gaps = 25/299 (8%) |
SwissP |
Show Blast
|
| O24210 |
Pantoate--beta-alanine ligase OS=Oryza sativa subsp. japonica GN=PANC PE=2 SV=2
Evalue: 2e-69 | Bitscore: 263
Identities = 155/293 (52%), Positives = 191/293 (65%), Gaps = 24/293 (8%) |
SwissP |
Show Blast
|
| O24035 |
Pantoate--beta-alanine ligase OS=Lotus japonicus GN=PANC PE=1 SV=3
Evalue: 7e-69 | Bitscore: 260
Identities = 136/297 (45%), Positives = 182/297 (61%), Gaps = 25/297 (8%) |
SwissP |
Show Blast
|
| B8FJ17 |
Pantothenate synthetase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=panC PE=3 SV=1
Evalue: 3e-62 | Bitscore: 238
Identities = 125/279 (44%), Positives = 176/279 (63%), Gaps = 8/279 (2%) |
SwissP |
Show Blast
|
| B0TBP5 |
Pantothenate synthetase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=panC PE=3 SV=1
Evalue: 6e-62 | Bitscore: 238
Identities = 133/279 (47%), Positives = 174/279 (62%), Gaps = 8/279 (2%) |
SwissP |
Show Blast
|
| C4XPZ7 |
Pantothenate synthetase OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=panC PE=3 SV=1
Evalue: 1e-59 | Bitscore: 229
Identities = 134/287 (46%), Positives = 181/287 (63%), Gaps = 17/287 (5%) |
SwissP |
Show Blast
|
| A3DDV6 |
Pantothenate synthetase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=panC PE=3 SV=1
Evalue: 9e-59 | Bitscore: 227
Identities = 122/281 (43%), Positives = 179/281 (63%), Gaps = 11/281 (3%) |
SwissP |
Show Blast
|
| Q74CG7 |
Pantothenate synthetase OS=Geobacter sulfurreducens GN=panC PE=3 SV=1
Evalue: 3e-58 | Bitscore: 225
Identities = 126/279 (45%), Positives = 165/279 (59%), Gaps = 8/279 (2%) |
SwissP |
Show Blast
|
| A7HND1 |
Pantothenate synthetase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=panC PE=3 SV=1
Evalue: 7e-58 | Bitscore: 224
Identities = 124/278 (44%), Positives = 168/278 (60%), Gaps = 7/278 (2%) |
SwissP |
Show Blast
|
| O86953 |
Pantothenate synthetase OS=Thermotoga neapolitana GN=panC PE=3 SV=1
Evalue: 3e-57 | Bitscore: 222
Identities = 129/281 (45%), Positives = 176/281 (62%), Gaps = 11/281 (3%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT5G48840.1 |
| Symbols: PANC | PANC (Arabidopsis homolog of bacterial panC); pantoate-beta-alanine ligase | chr5:19821049-19822267
Evalue: 6e-72 | Bitscore: 267
Identities = 147/299 (49%), Positives = 182/299 (60%), Gaps = 25/299 (8%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
