- Gene ID
- Ot17g00110
- Locus
- Ot17g00110
- Functional Description
- Peptidyl-prolyl cis-trans isomerase (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom17
- Last Modified On
- 09 March 2010 13h54
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- Peptidyl-prolyl cis-trans isomerase (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
isomerase activity
- Biological Process
-
n/a
Protein Domains
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL57738.1 |
Chain A, Solution Structure Of Pin1at From Arabidopsis Thaliana (ISS) [Ostreococcus tauri]
Evalue: 2e-112 | Bitscore: 409
Identities = 228/228 (100%), Positives = 228/228 (100%), Gaps = 0/228 (0%) |
NCBI |
Show Blast
|
| XP_002310854.1 |
predicted protein [Populus trichocarpa]
Evalue: 5e-31 | Bitscore: 138
Identities = 74/149 (49%), Positives = 88/149 (59%), Gaps = 35/149 (23%) |
NCBI |
Show Blast
|
| XP_002269631.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 4e-29 | Bitscore: 132
Identities = 68/149 (45%), Positives = 90/149 (60%), Gaps = 35/149 (23%) |
NCBI |
Show Blast
|
| CAM59671.1 |
parvulin-type peptidyl-prolyl cis/trans isomerase [Lotus japonicus]
Evalue: 2e-28 | Bitscore: 129
Identities = 70/146 (47%), Positives = 86/146 (58%), Gaps = 35/146 (23%) |
NCBI |
Show Blast
|
| EAD59018.1 |
unknown [environmental sequence]
Evalue: 2e-26 | Bitscore: 118
Identities = 79/147 (53%), Positives = 89/147 (60%), Gaps = 35/147 (23%) |
GOS |
Show Blast
|
| NP_001150505.1 |
peptidyl-prolyl cis-trans isomerase 1 [Zea mays]
Evalue: 5e-25 | Bitscore: 118
Identities = 71/154 (46%), Positives = 81/154 (52%), Gaps = 35/154 (22%) |
NCBI |
Show Blast
|
| XP_002447438.1 |
hypothetical protein SORBIDRAFT_06g001060 [Sorghum bicolor]
Evalue: 5e-25 | Bitscore: 118
Identities = 73/154 (47%), Positives = 83/154 (53%), Gaps = 35/154 (22%) |
NCBI |
Show Blast
|
| ACQ58756.1 |
Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Anoplopoma fimbria]
Evalue: 5e-25 | Bitscore: 118
Identities = 70/170 (41%), Positives = 92/170 (54%), Gaps = 41/170 (24%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAD59018.1 |
unknown [environmental sequence]
Evalue: 2e-26 | Bitscore: 118
Identities = 79/147 (53%), Positives = 89/147 (60%), Gaps = 35/147 (23%) |
GOS |
Show Blast
|
| EAA98557.1 |
unknown [environmental sequence]
Evalue: 4e-09 | Bitscore: 60
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 46/149 (30%) |
GOS |
Show Blast
|
| EAE78438.1 |
unknown [environmental sequence]
Evalue: 6e-09 | Bitscore: 60
Identities = 30/44 (68%), Positives = 34/44 (77%) |
GOS |
Show Blast
|
| EAD80818.1 |
unknown [environmental sequence]
Evalue: 7e-09 | Bitscore: 60
Identities = 29/44 (65%), Positives = 33/44 (75%) |
GOS |
Show Blast
|
| EAB80399.1 |
unknown [environmental sequence]
Evalue: 1e-08 | Bitscore: 59
Identities = 30/44 (68%), Positives = 34/44 (77%) |
GOS |
Show Blast
|
| EAF14667.1 |
unknown [environmental sequence]
Evalue: 2e-07 | Bitscore: 55
Identities = 26/45 (57%), Positives = 31/45 (68%) |
GOS |
Show Blast
|
| EAK16996.1 |
unknown [environmental sequence]
Evalue: 3e-07 | Bitscore: 54
Identities = 25/45 (55%), Positives = 31/45 (68%) |
GOS |
Show Blast
|
| EAD08751.1 |
unknown [environmental sequence]
Evalue: 6e-07 | Bitscore: 53
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 2/55 (3%) |
GOS |
Show Blast
|
| EAJ78808.1 |
unknown [environmental sequence]
Evalue: 2e-06 | Bitscore: 52
Identities = 26/59 (44%), Positives = 36/59 (61%) |
GOS |
Show Blast
|
| EAB06826.1 |
unknown [environmental sequence]
Evalue: 2e-06 | Bitscore: 52
Identities = 25/45 (55%), Positives = 30/45 (66%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL57738.1 |
Chain A, Solution Structure Of Pin1at From Arabidopsis Thaliana (ISS) [Ostreococcus tauri]
Evalue: 2e-112 | Bitscore: 409
Identities = 228/228 (100%), Positives = 228/228 (100%), Gaps = 0/228 (0%) |
NCBI |
Show Blast
|
| XP_002310854.1 |
predicted protein [Populus trichocarpa]
Evalue: 5e-31 | Bitscore: 138
Identities = 74/149 (49%), Positives = 88/149 (59%), Gaps = 35/149 (23%) |
NCBI |
Show Blast
|
| Q94G00 |
RecName: Full=Peptidyl-prolyl cis-trans isomerase Pin1; Short=PPIase Pin1; AltName: Full=Rotamase Pin1; AltName: Full=MdPin1
Evalue: 1e-29 | Bitscore: 133
Identities = 72/149 (48%), Positives = 86/149 (57%), Gaps = 35/149 (23%) |
NCBI |
Show Blast
|
| XP_002269631.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 4e-29 | Bitscore: 132
Identities = 68/149 (45%), Positives = 90/149 (60%), Gaps = 35/149 (23%) |
NCBI |
Show Blast
|
| CAM59671.1 |
parvulin-type peptidyl-prolyl cis/trans isomerase [Lotus japonicus]
Evalue: 2e-28 | Bitscore: 129
Identities = 70/146 (47%), Positives = 86/146 (58%), Gaps = 35/146 (23%) |
NCBI |
Show Blast
|
| Q9LEK8 |
RecName: Full=Peptidyl-prolyl cis-trans isomerase Pin1; Short=PPIase Pin1; AltName: Full=Rotamase Pin1; AltName: Full=DlPar13
Evalue: 3e-25 | Bitscore: 119
Identities = 66/149 (44%), Positives = 84/149 (56%), Gaps = 35/149 (23%) |
NCBI |
Show Blast
|
| NP_001150505.1 |
peptidyl-prolyl cis-trans isomerase 1 [Zea mays]
Evalue: 5e-25 | Bitscore: 118
Identities = 71/154 (46%), Positives = 81/154 (52%), Gaps = 35/154 (22%) |
NCBI |
Show Blast
|
| XP_002447438.1 |
hypothetical protein SORBIDRAFT_06g001060 [Sorghum bicolor]
Evalue: 5e-25 | Bitscore: 118
Identities = 73/154 (47%), Positives = 83/154 (53%), Gaps = 35/154 (22%) |
NCBI |
Show Blast
|
| ACQ58756.1 |
Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Anoplopoma fimbria]
Evalue: 5e-25 | Bitscore: 118
Identities = 70/170 (41%), Positives = 92/170 (54%), Gaps = 41/170 (24%) |
NCBI |
Show Blast
|
| NP_957042.1 |
protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 [Danio rerio]
Evalue: 7e-24 | Bitscore: 114
Identities = 67/157 (42%), Positives = 86/157 (54%), Gaps = 39/157 (24%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot05g03620 |
chrom05.0001 [570570..571115]
Evalue: 0.0003 | Bitscore: 40
Identities = 21/47 (44%), Positives = 30/47 (63%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q9SL42 |
Peptidyl-prolyl cis-trans isomerase Pin1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV=1
Evalue: 3e-24 | Bitscore: 111
Identities = 73/154 (47%), Positives = 90/154 (58%), Gaps = 35/154 (22%) |
SwissP |
Show Blast
|
| Q94G00 |
Peptidyl-prolyl cis-trans isomerase Pin1 OS=Malus domestica GN=PIN1 PE=2 SV=1
Evalue: 5e-24 | Bitscore: 110
Identities = 72/149 (48%), Positives = 86/149 (57%), Gaps = 35/149 (23%) |
SwissP |
Show Blast
|
| Q9LEK8 |
Peptidyl-prolyl cis-trans isomerase Pin1 OS=Digitalis lanata GN=PARV12.8 PE=1 SV=1
Evalue: 3e-20 | Bitscore: 98
Identities = 66/149 (44%), Positives = 84/149 (56%), Gaps = 35/149 (23%) |
SwissP |
Show Blast
|
| Q9QUR7 |
Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Mus musculus GN=Pin1 PE=1 SV=1
Evalue: 3e-19 | Bitscore: 95
Identities = 62/152 (40%), Positives = 79/152 (51%), Gaps = 39/152 (25%) |
SwissP |
Show Blast
|
| P0C1J8 |
Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus oryzae GN=pin1 PE=3 SV=1
Evalue: 3e-19 | Bitscore: 95
Identities = 65/153 (42%), Positives = 79/153 (51%), Gaps = 39/153 (25%) |
SwissP |
Show Blast
|
| Q13526 |
Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Homo sapiens GN=PIN1 PE=1 SV=1
Evalue: 5e-19 | Bitscore: 94
Identities = 64/152 (42%), Positives = 79/152 (51%), Gaps = 39/152 (25%) |
SwissP |
Show Blast
|
| Q4R383 |
Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Macaca fascicularis GN=PIN1 PE=2 SV=1
Evalue: 7e-19 | Bitscore: 94
Identities = 64/152 (42%), Positives = 79/152 (51%), Gaps = 39/152 (25%) |
SwissP |
Show Blast
|
| Q5BIN5 |
Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Bos taurus GN=PIN1 PE=2 SV=1
Evalue: 1e-18 | Bitscore: 93
Identities = 63/152 (41%), Positives = 78/152 (51%), Gaps = 39/152 (25%) |
SwissP |
Show Blast
|
| P54353 |
Protein dodo OS=Drosophila melanogaster GN=dod PE=1 SV=3
Evalue: 2e-16 | Bitscore: 86
Identities = 55/142 (38%), Positives = 72/142 (50%), Gaps = 39/142 (27%) |
SwissP |
Show Blast
|
| O74448 |
Peptidyl-prolyl cis-trans isomerase pin1 OS=Schizosaccharomyces pombe GN=pin1 PE=2 SV=1
Evalue: 2e-16 | Bitscore: 85
Identities = 57/150 (38%), Positives = 79/150 (52%), Gaps = 39/150 (26%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT2G18040.1 |
| Symbols: PIN1AT | PIN1AT (parvulin 1At) | chr2:7849428-7850619 FORWARD
Evalue: 3e-25 | Bitscore: 111
Identities = 73/154 (47%), Positives = 90/154 (58%), Gaps = 35/154 (22%) |
Tair |
Show Blast
|
| AT1G26550.1 |
| Symbols: | peptidyl-prolyl cis-trans isomerase PPIC-type family protein | chr1:9171787-9172703 FORWARD
Evalue: 2e-05 | Bitscore: 46
Identities = 21/47 (44%), Positives = 27/47 (57%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
