- Gene ID
- Ot16g02450
- Locus
- Ot16g02450
- Functional Description
- Thioredoxin-like protein (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom16
- Last Modified On
- 09 March 2010 13h42
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- Thioredoxin-like protein (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL58244.1 |
Thioredoxin-like protein (ISS) [Ostreococcus tauri]
Evalue: 4e-86 | Bitscore: 320
Identities = 162/162 (100%), Positives = 162/162 (100%), Gaps = 0/162 (0%) |
NCBI |
Show Blast
|
| XP_001421636.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 7e-24 | Bitscore: 113
Identities = 69/163 (42%), Positives = 92/163 (56%), Gaps = 4/163 (2%) |
NCBI |
Show Blast
|
| ACF84545.1 |
unknown [Zea mays]
Evalue: 2e-16 | Bitscore: 88
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 13/164 (7%) |
NCBI |
Show Blast
|
| XP_002466301.1 |
hypothetical protein SORBIDRAFT_01g005280 [Sorghum bicolor]
Evalue: 3e-16 | Bitscore: 88
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 13/164 (7%) |
NCBI |
Show Blast
|
| XP_002278320.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 5e-16 | Bitscore: 87
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 12/163 (7%) |
NCBI |
Show Blast
|
| NP_001051549.1 |
Os03g0795500 [Oryza sativa (japonica cultivar-group)]
Evalue: 5e-16 | Bitscore: 87
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 13/164 (7%) |
NCBI |
Show Blast
|
| NP_566238.1 |
unknown protein [Arabidopsis thaliana] sp|Q9SQZ9.2|Y3478_ARATH RecName: Full=UPF0424 protein At3g04780
Evalue: 9e-16 | Bitscore: 86
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 12/163 (7%) |
NCBI |
Show Blast
|
| NP_001146926.1 |
thioredoxin-like protein 1 [Zea mays]
Evalue: 1e-15 | Bitscore: 86
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 13/164 (7%) |
NCBI |
Show Blast
|
| ACF85255.1 |
unknown [Zea mays]
Evalue: 1e-15 | Bitscore: 85
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 13/164 (7%) |
NCBI |
Show Blast
|
| XP_002512222.1 |
conserved hypothetical protein [Ricinus communis]
Evalue: 1e-15 | Bitscore: 85
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 14/164 (8%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAE06881.1 |
unknown [environmental sequence]
Evalue: 1e-14 | Bitscore: 78
Identities = 63/166 (37%), Positives = 83/166 (50%), Gaps = 9/166 (5%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL58244.1 |
Thioredoxin-like protein (ISS) [Ostreococcus tauri]
Evalue: 4e-86 | Bitscore: 320
Identities = 162/162 (100%), Positives = 162/162 (100%), Gaps = 0/162 (0%) |
NCBI |
Show Blast
|
| XP_001421636.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 7e-24 | Bitscore: 113
Identities = 69/163 (42%), Positives = 92/163 (56%), Gaps = 4/163 (2%) |
NCBI |
Show Blast
|
| ACF84545.1 |
unknown [Zea mays]
Evalue: 2e-16 | Bitscore: 88
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 13/164 (7%) |
NCBI |
Show Blast
|
| XP_002466301.1 |
hypothetical protein SORBIDRAFT_01g005280 [Sorghum bicolor]
Evalue: 3e-16 | Bitscore: 88
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 13/164 (7%) |
NCBI |
Show Blast
|
| XP_002278320.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 5e-16 | Bitscore: 87
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 12/163 (7%) |
NCBI |
Show Blast
|
| NP_001051549.1 |
Os03g0795500 [Oryza sativa (japonica cultivar-group)]
Evalue: 5e-16 | Bitscore: 87
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 13/164 (7%) |
NCBI |
Show Blast
|
| NP_566238.1 |
unknown protein [Arabidopsis thaliana] sp|Q9SQZ9.2|Y3478_ARATH RecName: Full=UPF0424 protein At3g04780
Evalue: 9e-16 | Bitscore: 86
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 12/163 (7%) |
NCBI |
Show Blast
|
| NP_001146926.1 |
thioredoxin-like protein 1 [Zea mays]
Evalue: 1e-15 | Bitscore: 86
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 13/164 (7%) |
NCBI |
Show Blast
|
| ACF85255.1 |
unknown [Zea mays]
Evalue: 1e-15 | Bitscore: 85
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 13/164 (7%) |
NCBI |
Show Blast
|
| XP_002512222.1 |
conserved hypothetical protein [Ricinus communis]
Evalue: 1e-15 | Bitscore: 85
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 14/164 (8%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| No hits found against database Self with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q9SQZ9 |
UPF0424 protein At3g04780 OS=Arabidopsis thaliana GN=At3g04780 PE=1 SV=2
Evalue: 3e-15 | Bitscore: 80
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 12/163 (7%) |
SwissP |
Show Blast
|
| O43396 |
Thioredoxin-like protein 1 OS=Homo sapiens GN=TXNL1 PE=1 SV=3
Evalue: 4e-09 | Bitscore: 60
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 18/165 (10%) |
SwissP |
Show Blast
|
| Q920J4 |
Thioredoxin-like protein 1 OS=Rattus norvegicus GN=Txnl1 PE=1 SV=3
Evalue: 3e-08 | Bitscore: 57
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 18/165 (10%) |
SwissP |
Show Blast
|
| Q8CDN6 |
Thioredoxin-like protein 1 OS=Mus musculus GN=Txnl1 PE=1 SV=3
Evalue: 3e-08 | Bitscore: 57
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 18/165 (10%) |
SwissP |
Show Blast
|
| Q9USR1 |
Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe GN=txl1 PE=2 SV=1
Evalue: 4e-06 | Bitscore: 50
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 16/155 (10%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT3G04780.1 |
| Symbols: | Encodes a protein with little sequence identity with any other protein of known structure or function. Part
Evalue: 3e-16 | Bitscore: 80
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 12/163 (7%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
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