- Gene ID
- Ot16g00690
- Locus
- Ot16g00690
- Functional Description
- Alanine aminotransferase (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom16
- Last Modified On
- 09 March 2010 13h14
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- Alanine aminotransferase (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
catalytic activity
2.
pyridoxal phosphate binding
- Biological Process
-
1.
biosynthetic process
Protein Domains
| Domain ID | Description | Database |
|---|
|
IPR001176 |
1-aminocyclopropane-1-carboxylate synthase |
InterPro |
|
IPR015424 |
Pyridoxal phosphate-dependent transferase, major domain |
InterPro |
|
IPR004839 |
Aminotransferase, class I/II |
InterPro |
|
IPR004838 |
Aminotransferases, class-I, pyridoxal-phosphate-binding site |
InterPro |
|
PTHR11751 |
SUBGROUP I AMINOTRANSFERASE RELATED |
HMMPanther |
|
IPR015421 |
Pyridoxal phosphate-dependent transferase, major region, subdomain 1 |
InterPro |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL58068.1 |
putative aspartate aminotransferase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 815
Identities = 413/413 (100%), Positives = 413/413 (100%), Gaps = 0/413 (0%) |
NCBI |
Show Blast
|
| XP_001421566.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 664
Identities = 327/413 (79%), Positives = 361/413 (87%), Gaps = 1/413 (0%) |
NCBI |
Show Blast
|
| EEH54521.1 |
aspartate aminotransferase [Micromonas pusilla CCMP1545]
Evalue: 5e-155 | Bitscore: 551
Identities = 286/411 (69%), Positives = 321/411 (78%), Gaps = 5/411 (1%) |
NCBI |
Show Blast
|
| XP_002502760.1 |
aspartate aminotransferase [Micromonas sp. RCC299]
Evalue: 7e-151 | Bitscore: 538
Identities = 280/410 (68%), Positives = 313/410 (76%), Gaps = 2/410 (0%) |
NCBI |
Show Blast
|
| EAJ94791.1 |
unknown [environmental sequence]
Evalue: 1e-135 | Bitscore: 480
Identities = 239/303 (78%), Positives = 264/303 (87%), Gaps = 1/303 (0%) |
GOS |
Show Blast
|
| XP_001763787.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 1e-128 | Bitscore: 464
Identities = 238/403 (59%), Positives = 290/403 (71%), Gaps = 4/403 (0%) |
NCBI |
Show Blast
|
| NP_001044936.1 |
Os01g0871300 [Oryza sativa (japonica cultivar-group)]
Evalue: 5e-126 | Bitscore: 455
Identities = 231/403 (57%), Positives = 288/403 (71%), Gaps = 4/403 (0%) |
NCBI |
Show Blast
|
| XP_002307109.1 |
predicted protein [Populus trichocarpa]
Evalue: 1e-125 | Bitscore: 454
Identities = 233/405 (57%), Positives = 292/405 (72%), Gaps = 4/405 (0%) |
NCBI |
Show Blast
|
| NP_001143769.1 |
hypothetical protein LOC100276531 [Zea mays]
Evalue: 2e-125 | Bitscore: 453
Identities = 233/403 (57%), Positives = 287/403 (71%), Gaps = 4/403 (0%) |
NCBI |
Show Blast
|
| ACG37512.1 |
aspartate aminotransferase [Zea mays]
Evalue: 8e-125 | Bitscore: 451
Identities = 230/403 (57%), Positives = 287/403 (71%), Gaps = 4/403 (0%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAJ94791.1 |
unknown [environmental sequence]
Evalue: 1e-135 | Bitscore: 480
Identities = 239/303 (78%), Positives = 264/303 (87%), Gaps = 1/303 (0%) |
GOS |
Show Blast
|
| EAJ49928.1 |
unknown [environmental sequence]
Evalue: 9e-90 | Bitscore: 330
Identities = 171/392 (43%), Positives = 240/392 (61%), Gaps = 11/392 (2%) |
GOS |
Show Blast
|
| EAJ27772.1 |
unknown [environmental sequence]
Evalue: 4e-88 | Bitscore: 325
Identities = 173/392 (44%), Positives = 241/392 (61%), Gaps = 11/392 (2%) |
GOS |
Show Blast
|
| EAI20283.1 |
unknown [environmental sequence]
Evalue: 1e-87 | Bitscore: 323
Identities = 173/392 (44%), Positives = 240/392 (61%), Gaps = 11/392 (2%) |
GOS |
Show Blast
|
| EAI95248.1 |
unknown [environmental sequence]
Evalue: 3e-87 | Bitscore: 322
Identities = 165/392 (42%), Positives = 245/392 (62%), Gaps = 7/392 (1%) |
GOS |
Show Blast
|
| EAK09189.1 |
unknown [environmental sequence]
Evalue: 8e-87 | Bitscore: 320
Identities = 171/397 (43%), Positives = 243/397 (61%), Gaps = 12/397 (3%) |
GOS |
Show Blast
|
| EAJ52504.1 |
unknown [environmental sequence]
Evalue: 4e-86 | Bitscore: 318
Identities = 168/391 (42%), Positives = 242/391 (61%), Gaps = 11/391 (2%) |
GOS |
Show Blast
|
| EAJ29596.1 |
unknown [environmental sequence]
Evalue: 1e-85 | Bitscore: 316
Identities = 164/391 (41%), Positives = 241/391 (61%), Gaps = 11/391 (2%) |
GOS |
Show Blast
|
| EAJ43710.1 |
unknown [environmental sequence]
Evalue: 2e-85 | Bitscore: 315
Identities = 171/393 (43%), Positives = 238/393 (60%), Gaps = 15/393 (3%) |
GOS |
Show Blast
|
| EAJ09318.1 |
unknown [environmental sequence]
Evalue: 6e-85 | Bitscore: 314
Identities = 166/391 (42%), Positives = 238/391 (60%), Gaps = 7/391 (1%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL58068.1 |
putative aspartate aminotransferase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 815
Identities = 413/413 (100%), Positives = 413/413 (100%), Gaps = 0/413 (0%) |
NCBI |
Show Blast
|
| XP_001421566.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 664
Identities = 327/413 (79%), Positives = 361/413 (87%), Gaps = 1/413 (0%) |
NCBI |
Show Blast
|
| EEH54521.1 |
aspartate aminotransferase [Micromonas pusilla CCMP1545]
Evalue: 5e-155 | Bitscore: 551
Identities = 286/411 (69%), Positives = 321/411 (78%), Gaps = 5/411 (1%) |
NCBI |
Show Blast
|
| XP_002502760.1 |
aspartate aminotransferase [Micromonas sp. RCC299]
Evalue: 7e-151 | Bitscore: 538
Identities = 280/410 (68%), Positives = 313/410 (76%), Gaps = 2/410 (0%) |
NCBI |
Show Blast
|
| XP_001763787.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 1e-128 | Bitscore: 464
Identities = 238/403 (59%), Positives = 290/403 (71%), Gaps = 4/403 (0%) |
NCBI |
Show Blast
|
| NP_001044936.1 |
Os01g0871300 [Oryza sativa (japonica cultivar-group)]
Evalue: 5e-126 | Bitscore: 455
Identities = 231/403 (57%), Positives = 288/403 (71%), Gaps = 4/403 (0%) |
NCBI |
Show Blast
|
| XP_002307109.1 |
predicted protein [Populus trichocarpa]
Evalue: 1e-125 | Bitscore: 454
Identities = 233/405 (57%), Positives = 292/405 (72%), Gaps = 4/405 (0%) |
NCBI |
Show Blast
|
| NP_001143769.1 |
hypothetical protein LOC100276531 [Zea mays]
Evalue: 2e-125 | Bitscore: 453
Identities = 233/403 (57%), Positives = 287/403 (71%), Gaps = 4/403 (0%) |
NCBI |
Show Blast
|
| ACG37512.1 |
aspartate aminotransferase [Zea mays]
Evalue: 8e-125 | Bitscore: 451
Identities = 230/403 (57%), Positives = 287/403 (71%), Gaps = 4/403 (0%) |
NCBI |
Show Blast
|
| NP_001142303.1 |
hypothetical protein LOC100274472 [Zea mays]
Evalue: 9e-125 | Bitscore: 451
Identities = 230/403 (57%), Positives = 287/403 (71%), Gaps = 4/403 (0%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot11g01840 |
chrom11.0001 [315312..318296] incomplete
Evalue: 6e-56 | Bitscore: 213
Identities = 148/404 (36%), Positives = 208/404 (51%), Gaps = 34/404 (8%) |
Self |
Show Blast
|
| Ot06g02820 |
chrom06.0001 [428002..429135] incomplete
Evalue: 2e-22 | Bitscore: 102
Identities = 102/356 (28%), Positives = 157/356 (44%), Gaps = 34/356 (9%) |
Self |
Show Blast
|
| Ot03g02840 |
chrom03.0001 [447033..448451]
Evalue: 5e-17 | Bitscore: 84
Identities = 98/374 (26%), Positives = 156/374 (41%), Gaps = 42/374 (11%) |
Self |
Show Blast
|
| Ot01g04390 |
chrom01.0001 [717614..719108,719295..719299]
Evalue: 5e-14 | Bitscore: 73
Identities = 92/384 (23%), Positives = 158/384 (41%), Gaps = 27/384 (7%) |
Self |
Show Blast
|
| Ot08g02620 |
chrom08.0001 [439726..439797,439832..441094]
Evalue: 1e-10 | Bitscore: 62
Identities = 47/200 (23%), Positives = 78/200 (39%), Gaps = 43/200 (21%) |
Self |
Show Blast
|
| Ot18g01870 |
chrom18.0001 [286659..287456] incomplete
Evalue: 0.0002 | Bitscore: 42
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 12/110 (10%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q02635 |
Aspartate aminotransferase A OS=Rhizobium meliloti GN=aatA PE=3 SV=1
Evalue: 4e-84 | Bitscore: 311
Identities = 170/392 (43%), Positives = 239/392 (60%), Gaps = 10/392 (2%) |
SwissP |
Show Blast
|
| P53001 |
Aspartate aminotransferase OS=Bacillus subtilis GN=aspB PE=3 SV=1
Evalue: 2e-83 | Bitscore: 310
Identities = 170/398 (42%), Positives = 247/398 (62%), Gaps = 14/398 (3%) |
SwissP |
Show Blast
|
| P23034 |
Aspartate aminotransferase OS=Bacillus sp. (strain YM-2) PE=1 SV=1
Evalue: 3e-83 | Bitscore: 309
Identities = 173/398 (43%), Positives = 250/398 (62%), Gaps = 14/398 (3%) |
SwissP |
Show Blast
|
| O86459 |
Aspartate aminotransferase OS=Rhizobium leguminosarum bv. phaseoli GN=aspC PE=3 SV=1
Evalue: 6e-82 | Bitscore: 305
Identities = 167/392 (42%), Positives = 230/392 (58%), Gaps = 10/392 (2%) |
SwissP |
Show Blast
|
| O67781 |
Aspartate aminotransferase OS=Aquifex aeolicus GN=aspC PE=3 SV=1
Evalue: 2e-81 | Bitscore: 303
Identities = 177/403 (43%), Positives = 246/403 (61%), Gaps = 14/403 (3%) |
SwissP |
Show Blast
|
| Q55128 |
Aspartate aminotransferase OS=Synechocystis sp. (strain PCC 6803) GN=aspC PE=3 SV=1
Evalue: 2e-79 | Bitscore: 296
Identities = 167/398 (41%), Positives = 235/398 (59%), Gaps = 18/398 (4%) |
SwissP |
Show Blast
|
| P58350 |
Aspartate aminotransferase B OS=Rhizobium meliloti GN=aatB PE=3 SV=1
Evalue: 5e-79 | Bitscore: 295
Identities = 172/398 (43%), Positives = 239/398 (60%), Gaps = 8/398 (2%) |
SwissP |
Show Blast
|
| Q56232 |
Aspartate aminotransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=aspC PE=1 SV=1
Evalue: 1e-76 | Bitscore: 287
Identities = 180/402 (44%), Positives = 239/402 (59%), Gaps = 22/402 (5%) |
SwissP |
Show Blast
|
| Q4UND3 |
Aspartate aminotransferase OS=Rickettsia felis GN=aatA PE=3 SV=1
Evalue: 5e-76 | Bitscore: 285
Identities = 156/398 (39%), Positives = 234/398 (58%), Gaps = 8/398 (2%) |
SwissP |
Show Blast
|
| Q59228 |
Aspartate aminotransferase OS=Bacillus stearothermophilus GN=aspC PE=3 SV=1
Evalue: 1e-75 | Bitscore: 283
Identities = 163/401 (40%), Positives = 241/401 (60%), Gaps = 14/401 (3%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT2G22250.1 |
| Symbols: ATAAT, AAT, MEE17 | AAT/ATAAT/MEE17 (maternal effect embryo arrest 17); aspartate transaminase |
Evalue: 1e-119 | Bitscore: 426
Identities = 226/405 (55%), Positives = 283/405 (69%), Gaps = 4/405 (0%) |
Tair |
Show Blast
|
| AT2G22250.2 |
| Symbols: ATAAT, AAT, MEE17 | AAT/ATAAT/MEE17 (maternal effect embryo arrest 17); aspartate transaminase |
Evalue: 1e-119 | Bitscore: 424
Identities = 226/405 (55%), Positives = 283/405 (69%), Gaps = 4/405 (0%) |
Tair |
Show Blast
|
| AT2G22250.3 |
| Symbols: ATAAT, AAT, MEE17 | AAT/ATAAT/MEE17 (maternal effect embryo arrest 17); aspartate transaminase |
Evalue: 1e-119 | Bitscore: 424
Identities = 226/405 (55%), Positives = 283/405 (69%), Gaps = 4/405 (0%) |
Tair |
Show Blast
|
| AT1G77670.1 |
| Symbols: | aminotransferase class I and II family protein | chr1:29193937-29195795 REVERSE
Evalue: 4e-42 | Bitscore: 169
Identities = 114/384 (29%), Positives = 193/384 (50%), Gaps = 36/384 (9%) |
Tair |
Show Blast
|
| AT1G80360.1 |
| Symbols: | aminotransferase class I and II family protein | chr1:30213628-30215535 REVERSE
Evalue: 5e-26 | Bitscore: 115
Identities = 100/388 (25%), Positives = 174/388 (44%), Gaps = 33/388 (8%) |
Tair |
Show Blast
|
| AT5G36160.1 |
| Symbols: | aminotransferase-related | chr5:14250491-14252359 REVERSE
Evalue: 2e-19 | Bitscore: 94
Identities = 91/392 (23%), Positives = 181/392 (46%), Gaps = 41/392 (10%) |
Tair |
Show Blast
|
| AT2G20610.1 |
| Symbols: HLS3, RTY, ALF1, RTY1, SUR1 | SUR1 (SUPERROOT 1); transaminase | chr2:8885231-8887379 REVERSE
Evalue: 9e-16 | Bitscore: 81
Identities = 86/383 (22%), Positives = 162/383 (42%), Gaps = 29/383 (7%) |
Tair |
Show Blast
|
| AT5G53970.1 |
| Symbols: | aminotransferase, putative | chr5:21927902-21929820 FORWARD
Evalue: 2e-14 | Bitscore: 77
Identities = 87/386 (22%), Positives = 160/386 (41%), Gaps = 33/386 (8%) |
Tair |
Show Blast
|
| AT2G24850.1 |
| Symbols: TAT, TAT3 | TAT3 (TYROSINE AMINOTRANSFERASE 3); transaminase | chr2:10590149-10592231 REVERSE
Evalue: 7e-14 | Bitscore: 75
Identities = 82/387 (21%), Positives = 161/387 (41%), Gaps = 26/387 (6%) |
Tair |
Show Blast
|
| AT1G23310.1 |
| Symbols: AOAT1, GGT1 | GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1) | chr1:8268709-8271318 REVERSE
Evalue: 5e-13 | Bitscore: 72
Identities = 83/345 (24%), Positives = 139/345 (40%), Gaps = 35/345 (10%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
| EST ID | OtEST02418 |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 54939..55851,185753..185778 |
Strand + |
| EST ID | OtEST03143 |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 54939..55851,185753..185778 |
Strand + |
|
