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Ostreococcus tauri


Gene ID
Ot16g00470
Locus
Ot16g00470
Functional Description
unnamed product
Gene Type
protein-coding gene
Contig
chrom16
Last Modified On
09 March 2010 13h10
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
unnamed product
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
1.
hexosyltransferase activity

Biological Process
1.
metabolic process

Protein Domains 


Domain IDDescriptionDatabase
IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase InterPro
SSF53756 UDP-Glycosyltransferase/glycogen phosphorylase superfamily
G3DSA:3.40.50.2000 no description Gene3D

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
CAL58046.1 COG1819: Glycosyl transferases, related to UDP-glucuronosyltransferase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 742
Identities = 415/415 (100%), Positives = 415/415 (100%), Gaps = 0/415 (0%)		 NCBI
Show Blast
XP_001421559.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 1e-74 | Bitscore: 284
Identities = 187/397 (47%), Positives = 248/397 (62%), Gaps = 19/397 (4%)		 NCBI
Show Blast
YP_002424208.1 glycosyl transferase family 28 [Methylobacterium chloromethanicum CM4]
Evalue: 5e-11 | Bitscore: 73
Identities = 75/232 (32%), Positives = 104/232 (44%), Gaps = 28/232 (12%)		 NCBI
Show Blast
ABZ10202.1 putative glycosyltransferase family 28 N-terminal domain protein [uncultured marine microorganism HF4000_APKG10H12]
Evalue: 1e-09 | Bitscore: 68
Identities = 63/215 (29%), Positives = 91/215 (42%), Gaps = 21/215 (9%)		 NCBI
Show Blast
CAM96575.1 probable glycosyltransferase [Streptomyces ambofaciens]
Evalue: 3e-09 | Bitscore: 67
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 9/122 (7%)		 NCBI
Show Blast
ZP_02929878.1 glycosyl transferase, family 28 [Verrucomicrobium spinosum DSM 4136]
Evalue: 8e-09 | Bitscore: 66
Identities = 102/413 (24%), Positives = 159/413 (38%), Gaps = 52/413 (12%)		 NCBI
Show Blast
ABG67706.1 glycosyltransferase [Streptomyces mycarofaciens]
Evalue: 3e-08 | Bitscore: 64
Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 12/134 (8%)		 NCBI
Show Blast
YP_001983651.1 glycosyl transferase, putative, gt1C [Cellvibrio japonicus Ueda107]
Evalue: 2e-06 | Bitscore: 58
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 4/85 (4%)		 NCBI
Show Blast
YP_001754714.1 glycosyl transferase family protein [Methylobacterium radiotolerans JCM 2831]
Evalue: 1e-05 | Bitscore: 55
Identities = 62/186 (33%), Positives = 85/186 (45%), Gaps = 20/186 (10%)		 NCBI
Show Blast
YP_001832917.1 glycosyl transferase family protein [Beijerinckia indica subsp. indica ATCC 9039]
Evalue: 3e-05 | Bitscore: 54
Identities = 89/355 (25%), Positives = 136/355 (38%), Gaps = 58/355 (16%)		 NCBI
Show Blast

Gene Structure 

View in GenomeView|View in Artemini


Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
+
Structure Quality
2

CDS  

Locus ID
OT16G00470
Redo Blast
CDS Length
1248 nucleotides
CDS Sequence

Protein 

Locus ID
OT16G00470
Redo Blast
Protein Length
416 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

View in GenomeView|View in Artemini


EST IDOtEST02418 Support ModelN More Info
CommentEST is not matching the given gene model.
EST IDOtEST03143 Support ModelN More Info
CommentEST is not matching the given gene model.