- Gene ID
- Ot13g01210
- Locus
- Ot13g01210
- Functional Description
- GTPase Ran/TC4/GSP1 (nuclear protein transport pathway), small G protein superfamily (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom13
- Last Modified On
- 09 March 2010 10h48
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
| Sorry, only history comparison allowed for non logged in users!! |
Compare this version with :
Go! |
Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- GTPase Ran/TC4/GSP1 (nuclear protein transport pathway), small G protein superfamily (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
GTP binding
- Biological Process
-
1.
small GTPase mediated signal transduction
Protein Domains
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL56449.1 |
GTP-binding protein (ISS) [Ostreococcus tauri]
Evalue: 6e-113 | Bitscore: 410
Identities = 194/194 (100%), Positives = 194/194 (100%), Gaps = 0/194 (0%) |
NCBI |
Show Blast
|
| Ol13g01110 |
-
Evalue: 1e-112 | Bitscore: 398
Identities = 188/195 (96%), Positives = 188/195 (96%), Gaps = 1/195 (0%) |
O.luci |
Show Blast
|
| XP_001421080.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 8e-108 | Bitscore: 393
Identities = 188/195 (96%), Positives = 188/195 (96%), Gaps = 1/195 (0%) |
NCBI |
Show Blast
|
| XP_002503301.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 2e-103 | Bitscore: 378
Identities = 176/188 (93%), Positives = 183/188 (97%), Gaps = 0/188 (0%) |
NCBI |
Show Blast
|
| XP_003058435.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 4e-129 | Bitscore: 369
Identities = 172/189 (91%), Positives = 180/189 (95%), Gaps = 0/189 (0%) |
NCBI |
Show Blast
|
| EEH56890.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 1e-100 | Bitscore: 369
Identities = 172/189 (91%), Positives = 180/189 (95%), Gaps = 0/189 (0%) |
NCBI |
Show Blast
|
| P41919 |
GTP-binding nuclear protein Ran-B1 OS=Nicotiana tabacum GN=RAN-B1 PE=2 SV=1
Evalue: 2e-96 | Bitscore: 351
Identities = 159/195 (81%), Positives = 174/195 (89%), Gaps = 3/195 (1%) |
SwissP |
Show Blast
|
| P41918 |
GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum GN=RAN-A1 PE=2 SV=1
Evalue: 2e-96 | Bitscore: 351
Identities = 157/184 (85%), Positives = 171/184 (92%) |
SwissP |
Show Blast
|
| P41919 |
GTP-binding nuclear protein Ran-B1 OS=Nicotiana tabacum GN=RAN-B1 PE=2 SV=1
Evalue: 2e-96 | Bitscore: 351
Identities = 159/195 (81%), Positives = 174/195 (89%), Gaps = 3/195 (1%) |
SwissP |
Show Blast
|
| P41918 |
GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum GN=RAN-A1 PE=2 SV=1
Evalue: 2e-96 | Bitscore: 351
Identities = 157/184 (85%), Positives = 171/184 (92%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAC60855.1 |
unknown [environmental sequence]
Evalue: 5e-19 | Bitscore: 94
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 15/189 (7%) |
GOS |
Show Blast
|
| EAC60855.1 |
unknown [environmental sequence]
Evalue: 5e-19 | Bitscore: 94
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 15/189 (7%) |
GOS |
Show Blast
|
| EAK39351.1 |
unknown [environmental sequence]
Evalue: 2e-16 | Bitscore: 85
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 3/154 (1%) |
GOS |
Show Blast
|
| EAK39351.1 |
unknown [environmental sequence]
Evalue: 2e-16 | Bitscore: 85
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 3/154 (1%) |
GOS |
Show Blast
|
| EAC93829.1 |
unknown [environmental sequence]
Evalue: 4e-16 | Bitscore: 84
Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 7/167 (4%) |
GOS |
Show Blast
|
| EAC93829.1 |
unknown [environmental sequence]
Evalue: 4e-16 | Bitscore: 84
Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 7/167 (4%) |
GOS |
Show Blast
|
| EAC00141.1 |
unknown [environmental sequence]
Evalue: 2e-15 | Bitscore: 81
Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 16/160 (10%) |
GOS |
Show Blast
|
| EAC00141.1 |
unknown [environmental sequence]
Evalue: 2e-15 | Bitscore: 81
Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 16/160 (10%) |
GOS |
Show Blast
|
| EAB57280.1 |
unknown [environmental sequence]
Evalue: 7e-15 | Bitscore: 80
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 18/174 (10%) |
GOS |
Show Blast
|
| EAB57280.1 |
unknown [environmental sequence]
Evalue: 7e-15 | Bitscore: 80
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 18/174 (10%) |
GOS |
Show Blast
|
| EAJ10721.1 |
unknown [environmental sequence]
Evalue: 4e-14 | Bitscore: 77
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 3/156 (1%) |
GOS |
Show Blast
|
| EAJ10721.1 |
unknown [environmental sequence]
Evalue: 4e-14 | Bitscore: 77
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 3/156 (1%) |
GOS |
Show Blast
|
| EAK45458.1 |
unknown [environmental sequence]
Evalue: 5e-14 | Bitscore: 77
Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 4/161 (2%) |
GOS |
Show Blast
|
| EAK45458.1 |
unknown [environmental sequence]
Evalue: 5e-14 | Bitscore: 77
Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 4/161 (2%) |
GOS |
Show Blast
|
| EAK24025.1 |
unknown [environmental sequence]
Evalue: 1e-13 | Bitscore: 76
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 8/161 (4%) |
GOS |
Show Blast
|
| EAK24025.1 |
unknown [environmental sequence]
Evalue: 1e-13 | Bitscore: 76
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 8/161 (4%) |
GOS |
Show Blast
|
| EAB64767.1 |
unknown [environmental sequence]
Evalue: 7e-13 | Bitscore: 73
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 5/155 (3%) |
GOS |
Show Blast
|
| EAB64767.1 |
unknown [environmental sequence]
Evalue: 7e-13 | Bitscore: 73
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 5/155 (3%) |
GOS |
Show Blast
|
| EAJ90355.1 |
unknown [environmental sequence]
Evalue: 2e-12 | Bitscore: 72
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 3/171 (1%) |
GOS |
Show Blast
|
| EAJ90355.1 |
unknown [environmental sequence]
Evalue: 2e-12 | Bitscore: 72
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 3/171 (1%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL56449.1 |
GTP-binding protein (ISS) [Ostreococcus tauri]
Evalue: 6e-113 | Bitscore: 410
Identities = 194/194 (100%), Positives = 194/194 (100%), Gaps = 0/194 (0%) |
NCBI |
Show Blast
|
| XP_001421080.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 2e-138 | Bitscore: 393
Identities = 188/195 (96%), Positives = 188/195 (96%), Gaps = 1/195 (1%) |
NCBI |
Show Blast
|
| XP_001421080.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 8e-108 | Bitscore: 393
Identities = 188/195 (96%), Positives = 188/195 (96%), Gaps = 1/195 (0%) |
NCBI |
Show Blast
|
| XP_002503301.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 8e-133 | Bitscore: 378
Identities = 176/188 (94%), Positives = 183/188 (97%), Gaps = 0/188 (0%) |
NCBI |
Show Blast
|
| XP_002503301.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 2e-103 | Bitscore: 378
Identities = 176/188 (93%), Positives = 183/188 (97%), Gaps = 0/188 (0%) |
NCBI |
Show Blast
|
| XP_003058435.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 4e-129 | Bitscore: 369
Identities = 172/189 (91%), Positives = 180/189 (95%), Gaps = 0/189 (0%) |
NCBI |
Show Blast
|
| EEH56890.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 1e-100 | Bitscore: 369
Identities = 172/189 (91%), Positives = 180/189 (95%), Gaps = 0/189 (0%) |
NCBI |
Show Blast
|
| XP_002308648.1 |
predicted protein [Populus trichocarpa]
Evalue: 6e-121 | Bitscore: 348
Identities = 161/195 (83%), Positives = 176/195 (90%), Gaps = 3/195 (2%) |
NCBI |
Show Blast
|
| ABK94282.1 |
unknown [Populus trichocarpa]
Evalue: 7e-121 | Bitscore: 348
Identities = 161/195 (83%), Positives = 176/195 (90%), Gaps = 3/195 (2%) |
NCBI |
Show Blast
|
| AEM97824.1 |
Ran3D-1 [Dimocarpus longan]
Evalue: 1e-120 | Bitscore: 348
Identities = 158/186 (85%), Positives = 172/186 (92%), Gaps = 0/186 (0%) |
NCBI |
Show Blast
|
| ABK94282.1 |
unknown [Populus trichocarpa]
Evalue: 2e-94 | Bitscore: 348
Identities = 161/195 (82%), Positives = 176/195 (90%), Gaps = 3/195 (1%) |
NCBI |
Show Blast
|
| XP_002308648.1 |
predicted protein [Populus trichocarpa]
Evalue: 2e-94 | Bitscore: 348
Identities = 161/195 (82%), Positives = 176/195 (90%), Gaps = 3/195 (1%) |
NCBI |
Show Blast
|
| XP_002515555.1 |
ran, putative [Ricinus communis]
Evalue: 3e-120 | Bitscore: 347
Identities = 158/191 (83%), Positives = 174/191 (91%), Gaps = 0/191 (0%) |
NCBI |
Show Blast
|
| XP_001760763.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 1e-119 | Bitscore: 347
Identities = 157/189 (83%), Positives = 173/189 (92%), Gaps = 0/189 (0%) |
NCBI |
Show Blast
|
| XP_001760763.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 4e-94 | Bitscore: 347
Identities = 157/189 (83%), Positives = 173/189 (91%), Gaps = 0/189 (0%) |
NCBI |
Show Blast
|
| XP_002515555.1 |
ran, putative [Ricinus communis]
Evalue: 6e-94 | Bitscore: 347
Identities = 158/191 (82%), Positives = 174/191 (91%), Gaps = 0/191 (0%) |
NCBI |
Show Blast
|
| ACJ86144.1 |
unknown [Medicago truncatula]
Evalue: 4e-120 | Bitscore: 346
Identities = 160/195 (82%), Positives = 175/195 (90%), Gaps = 3/195 (2%) |
NCBI |
Show Blast
|
| ACJ83916.1 |
unknown [Medicago truncatula]
Evalue: 8e-120 | Bitscore: 346
Identities = 160/195 (82%), Positives = 175/195 (90%), Gaps = 3/195 (2%) |
NCBI |
Show Blast
|
| ACJ86144.1 |
unknown [Medicago truncatula]
Evalue: 8e-94 | Bitscore: 346
Identities = 160/195 (82%), Positives = 175/195 (89%), Gaps = 3/195 (1%) |
NCBI |
Show Blast
|
| P41918 |
RecName: Full=GTP-binding nuclear protein Ran-A1
Evalue: 1e-93 | Bitscore: 346
Identities = 157/184 (85%), Positives = 171/184 (92%), Gaps = 0/184 (0%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ol13g01110 |
-
Evalue: 1e-112 | Bitscore: 398
Identities = 188/195 (96%), Positives = 188/195 (96%), Gaps = 1/195 (0%) |
O.luci |
Show Blast
|
| Ol07g02720 |
-
Evalue: 8e-21 | Bitscore: 95
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 2/164 (1%) |
O.luci |
Show Blast
|
| Ol04g01860 |
+
Evalue: 3e-20 | Bitscore: 93
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 15/192 (7%) |
O.luci |
Show Blast
|
| Ol07g00680 |
-
Evalue: 1e-19 | Bitscore: 91
Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 7/171 (4%) |
O.luci |
Show Blast
|
| Ol07g00660 |
+
Evalue: 6e-19 | Bitscore: 89
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 3/164 (1%) |
O.luci |
Show Blast
|
| Ol05g02290 |
-
Evalue: 2e-18 | Bitscore: 87
Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 4/159 (2%) |
O.luci |
Show Blast
|
| Ol05g01990 |
+
Evalue: 4e-18 | Bitscore: 85
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 8/173 (4%) |
O.luci |
Show Blast
|
| Ol06g02090 |
+
Evalue: 4e-18 | Bitscore: 85
Identities = 48/172 (27%), Positives = 91/172 (52%), Gaps = 4/172 (2%) |
O.luci |
Show Blast
|
| Ol08g02410 |
+
Evalue: 3e-16 | Bitscore: 80
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 3/164 (1%) |
O.luci |
Show Blast
|
| Ol06g02900 |
+
Evalue: 3e-12 | Bitscore: 66
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 9/133 (6%) |
O.luci |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot07g00720 |
length:204 (n/a) (GTP-binding protein SEC4, small G protein superfamily, and related Ras family GTP-binding proteins
Evalue: 1e-19 | Bitscore: 91
Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 7/171 (4%) |
Self |
Show Blast
|
| Ot04g01900 |
length:210 (n/a) (GTP-binding protein SEC4, small G protein superfamily, and related Ras family GTP-binding proteins
Evalue: 4e-19 | Bitscore: 89
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 15/192 (7%) |
Self |
Show Blast
|
| Ot05g02380 |
length:214 (n/a) (Rab-type small GTP-binding protein-like (ISS))
Evalue: 1e-18 | Bitscore: 87
Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 8/179 (4%) |
Self |
Show Blast
|
| Ot07g00720 |
chrom07.0001 [107510..108142,108346..108381]
Evalue: 1e-17 | Bitscore: 84
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 7/167 (4%) |
Self |
Show Blast
|
| Ot08g02530 |
length:200 (n/a) (GTPase Rab11/YPT3, small G protein superfamily (ISS))
Evalue: 1e-17 | Bitscore: 84
Identities = 51/174 (29%), Positives = 91/174 (52%), Gaps = 3/174 (1%) |
Self |
Show Blast
|
| Ot02g03250 |
length:215 (n/a) (Rab1 small GTPase from the Rab subfamily (IC))
Evalue: 2e-17 | Bitscore: 84
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 3/155 (1%) |
Self |
Show Blast
|
| Ot07g00700 |
length:216 (n/a) (GTP-binding protein SEC4, small G protein superfamily, and related Ras family GTP-binding proteins
Evalue: 8e-17 | Bitscore: 81
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 3/158 (1%) |
Self |
Show Blast
|
| Ot05g01980 |
length:205 (n/a) (putative GTP-binding protein RAB1Y (ISS))
Evalue: 3e-16 | Bitscore: 80
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 6/168 (3%) |
Self |
Show Blast
|
| Ot06g02360 |
chrom06.0001 [356254..356919]
Evalue: 5e-16 | Bitscore: 79
Identities = 47/162 (29%), Positives = 85/162 (52%), Gaps = 6/162 (3%) |
Self |
Show Blast
|
| Ot06g02360 |
length:222 (n/a) (GTPase Rab5/YPT51 and related small G protein superfamily GTPases (ISS))
Evalue: 5e-16 | Bitscore: 79
Identities = 47/162 (29%), Positives = 85/162 (52%), Gaps = 6/162 (3%) |
Self |
Show Blast
|
| Ot08g02530 |
chrom08.0001 [428529..428580,428625..429268]
Evalue: 6e-16 | Bitscore: 79
Identities = 47/162 (29%), Positives = 85/162 (52%), Gaps = 3/162 (1%) |
Self |
Show Blast
|
| Ot05g01980 |
chrom05.0001 [287590..287601,287755..288841,288882..289075,
Evalue: 2e-15 | Bitscore: 77
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 6/168 (3%) |
Self |
Show Blast
|
| Ot04g01900 |
chrom04.0001 [273503..274057]
Evalue: 3e-13 | Bitscore: 70
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 15/176 (8%) |
Self |
Show Blast
|
| Ot05g02380 |
chrom05.0001 [355350..355838]
Evalue: 3e-12 | Bitscore: 67
Identities = 38/131 (29%), Positives = 71/131 (54%), Gaps = 8/131 (6%) |
Self |
Show Blast
|
| Ot06g03220 |
length:190 (n/a) (Ras-related small GTPase, Rho type (ISS))
Evalue: 1e-11 | Bitscore: 64
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 16/163 (9%) |
Self |
Show Blast
|
| Ot06g03220 |
chrom06.0001 [488910..489088,489120..489370,489411..489817,
Evalue: 9e-11 | Bitscore: 61
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 8/159 (5%) |
Self |
Show Blast
|
| Ot09g03940 |
chrom09.0001 [596111..596884]
Evalue: 1e-10 | Bitscore: 61
Identities = 49/180 (27%), Positives = 70/180 (38%), Gaps = 25/180 (13%) |
Self |
Show Blast
|
| Ot09g03940 |
length:258 (n/a) (GTP-binding protein SEC4, small G protein superfamily, and related Ras family GTP-binding proteins
Evalue: 1e-10 | Bitscore: 61
Identities = 49/180 (27%), Positives = 70/180 (38%), Gaps = 25/180 (13%) |
Self |
Show Blast
|
| Ot07g00700 |
chrom07.0001 [104773..104845,104932..105151,105208..105655]
Evalue: 4e-08 | Bitscore: 52
Identities = 46/189 (24%), Positives = 77/189 (40%), Gaps = 34/189 (17%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| P41919 |
GTP-binding nuclear protein Ran-B1 OS=Nicotiana tabacum GN=RAN-B1 PE=2 SV=1
Evalue: 2e-96 | Bitscore: 351
Identities = 159/195 (81%), Positives = 174/195 (89%), Gaps = 3/195 (1%) |
SwissP |
Show Blast
|
| P41918 |
GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum GN=RAN-A1 PE=2 SV=1
Evalue: 2e-96 | Bitscore: 351
Identities = 157/184 (85%), Positives = 171/184 (92%) |
SwissP |
Show Blast
|
| P41919 |
GTP-binding nuclear protein Ran-B1 OS=Nicotiana tabacum GN=RAN-B1 PE=2 SV=1
Evalue: 2e-96 | Bitscore: 351
Identities = 159/195 (81%), Positives = 174/195 (89%), Gaps = 3/195 (1%) |
SwissP |
Show Blast
|
| P41918 |
GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum GN=RAN-A1 PE=2 SV=1
Evalue: 2e-96 | Bitscore: 351
Identities = 157/184 (85%), Positives = 171/184 (92%) |
SwissP |
Show Blast
|
| P38547 |
GTP-binding nuclear protein Ran2 OS=Solanum lycopersicum GN=RAN2 PE=2 SV=1
Evalue: 6e-96 | Bitscore: 350
Identities = 159/195 (81%), Positives = 174/195 (89%), Gaps = 3/195 (1%) |
SwissP |
Show Blast
|
| P38547 |
GTP-binding nuclear protein Ran2 OS=Solanum lycopersicum GN=RAN2 PE=2 SV=1
Evalue: 6e-96 | Bitscore: 350
Identities = 159/195 (81%), Positives = 174/195 (89%), Gaps = 3/195 (1%) |
SwissP |
Show Blast
|
| P38546 |
GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum GN=RAN1 PE=2 SV=1
Evalue: 7e-96 | Bitscore: 349
Identities = 159/195 (81%), Positives = 174/195 (89%), Gaps = 3/195 (1%) |
SwissP |
Show Blast
|
| Q8H156 |
GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana GN=RAN3 PE=1 SV=2
Evalue: 7e-96 | Bitscore: 349
Identities = 159/195 (81%), Positives = 174/195 (89%), Gaps = 3/195 (1%) |
SwissP |
Show Blast
|
| Q8H156 |
GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana GN=RAN3 PE=1 SV=2
Evalue: 7e-96 | Bitscore: 349
Identities = 159/195 (81%), Positives = 174/195 (89%), Gaps = 3/195 (1%) |
SwissP |
Show Blast
|
| P38548 |
GTP-binding nuclear protein Ran/TC4 OS=Vicia faba PE=2 SV=1
Evalue: 8e-96 | Bitscore: 349
Identities = 158/195 (81%), Positives = 174/195 (89%), Gaps = 3/195 (1%) |
SwissP |
Show Blast
|
| P38546 |
GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum GN=RAN1 PE=2 SV=1
Evalue: 8e-96 | Bitscore: 349
Identities = 159/195 (81%), Positives = 174/195 (89%), Gaps = 3/195 (1%) |
SwissP |
Show Blast
|
| A2WSI7 |
GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica GN=RAN1 PE=2 SV=2
Evalue: 9e-96 | Bitscore: 349
Identities = 160/195 (82%), Positives = 175/195 (89%), Gaps = 3/195 (1%) |
SwissP |
Show Blast
|
| Q7F7I7 |
GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica GN=RAN1 PE=2 SV=1
Evalue: 9e-96 | Bitscore: 349
Identities = 160/195 (82%), Positives = 175/195 (89%), Gaps = 3/195 (1%) |
SwissP |
Show Blast
|
| A2WSI7 |
GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica GN=RAN1 PE=2 SV=2
Evalue: 9e-96 | Bitscore: 349
Identities = 160/195 (82%), Positives = 175/195 (89%), Gaps = 3/195 (1%) |
SwissP |
Show Blast
|
| P38548 |
GTP-binding nuclear protein Ran/TC4 OS=Vicia faba PE=2 SV=1
Evalue: 9e-96 | Bitscore: 349
Identities = 158/195 (81%), Positives = 174/195 (89%), Gaps = 3/195 (1%) |
SwissP |
Show Blast
|
| Q7F7I7 |
GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica GN=RAN1 PE=2 SV=1
Evalue: 9e-96 | Bitscore: 349
Identities = 160/195 (82%), Positives = 175/195 (89%), Gaps = 3/195 (1%) |
SwissP |
Show Blast
|
| P54766 |
GTP-binding nuclear protein Ran1B (Fragment) OS=Lotus japonicus GN=RAN1B PE=2 SV=1
Evalue: 1e-95 | Bitscore: 348
Identities = 156/182 (85%), Positives = 169/182 (92%) |
SwissP |
Show Blast
|
| P54766 |
GTP-binding nuclear protein Ran1B (Fragment) OS=Lotus japonicus GN=RAN1B PE=2 SV=1
Evalue: 1e-95 | Bitscore: 348
Identities = 156/182 (85%), Positives = 169/182 (92%) |
SwissP |
Show Blast
|
| P54765 |
GTP-binding nuclear protein Ran1A (Fragment) OS=Lotus japonicus GN=RAN1A PE=2 SV=1
Evalue: 2e-95 | Bitscore: 348
Identities = 156/182 (85%), Positives = 169/182 (92%) |
SwissP |
Show Blast
|
| P54765 |
GTP-binding nuclear protein Ran1A (Fragment) OS=Lotus japonicus GN=RAN1A PE=2 SV=1
Evalue: 2e-95 | Bitscore: 348
Identities = 156/182 (85%), Positives = 169/182 (92%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT5G55190.1 |
| Symbols: RAN3 | RAN3; GTP binding | chr5:22409511-22411183 FORWARD
Evalue: 7e-97 | Bitscore: 349
Identities = 159/195 (81%), Positives = 174/195 (89%), Gaps = 3/195 (1%) |
Tair |
Show Blast
|
| AT5G55190.1 |
| Symbols: RAN3, ATRAN3 | RAN GTPase 3 | chr5:22392285-22393957 FORWARD LENGTH=666 222
Evalue: 7e-97 | Bitscore: 349
Identities = 159/195 (81%), Positives = 174/195 (89%), Gaps = 3/195 (1%) |
Tair |
Show Blast
|
| AT5G20010.1 |
| Symbols: RAN1, ATRAN1, RAN-1 | RAN-1 (RAS RELATED NUCLEAR PROTEIN); GTP binding | chr5:6760366-6761749 FORWARD
Evalue: 3e-96 | Bitscore: 347
Identities = 157/196 (80%), Positives = 175/196 (89%), Gaps = 3/196 (1%) |
Tair |
Show Blast
|
| AT5G20020.1 |
| Symbols: RAN2 | RAN2 (Ras-related GTP-binding nuclear protein 2); GTP binding | chr5:6762819-6764383 FORWARD
Evalue: 3e-96 | Bitscore: 347
Identities = 158/195 (81%), Positives = 174/195 (89%), Gaps = 3/195 (1%) |
Tair |
Show Blast
|
| AT5G20020.1 |
| Symbols: RAN2 | RAS-related GTP-binding nuclear protein 2 | chr5:6762817-6764381 FORWARD LENGTH=666 222
Evalue: 3e-96 | Bitscore: 347
Identities = 158/195 (81%), Positives = 174/195 (89%), Gaps = 3/195 (1%) |
Tair |
Show Blast
|
| AT5G20010.1 |
| Symbols: RAN-1, RAN1, ATRAN1 | RAS-related nuclear protein-1 | chr5:6760364-6761747 FORWARD LENGTH=666 222
Evalue: 4e-96 | Bitscore: 347
Identities = 157/196 (80%), Positives = 175/196 (89%), Gaps = 3/196 (1%) |
Tair |
Show Blast
|
| AT5G55080.1 |
| Symbols: ATRAN4 | ATRAN4 (RAS-RELATED NUCLEAR PROTEIN 4); GTP binding | chr5:22368802-22370284 REVERSE
Evalue: 9e-76 | Bitscore: 279
Identities = 121/174 (69%), Positives = 150/174 (86%) |
Tair |
Show Blast
|
| AT5G55080.1 |
| Symbols: AtRAN4, RAN4 | ras-related nuclear protein 4 | chr5:22351576-22353058 REVERSE LENGTH=669 223
Evalue: 1e-75 | Bitscore: 279
Identities = 121/174 (69%), Positives = 150/174 (86%) |
Tair |
Show Blast
|
| AT2G44610.1 |
| Symbols: AtRABH1b, AtRab6A, RAB6 | RAB6; GTP binding | chr2:18418854-18420959 REVERSE
Evalue: 7e-22 | Bitscore: 100
Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 3/179 (1%) |
Tair |
Show Blast
|
| AT2G44610.1 |
| Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-related small GTP-binding family protein | chr2:18411778-18413883
Evalue: 7e-22 | Bitscore: 100
Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 3/179 (1%) |
Tair |
Show Blast
|
| AT4G39890.1 |
| Symbols: AtRABH1c | AtRABH1c (Arabidopsis Rab GTPase homolog H1c); GTP binding | chr4:18506106-18507453 FORWARD
Evalue: 9e-22 | Bitscore: 100
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 10/167 (5%) |
Tair |
Show Blast
|
| AT4G39890.1 |
| Symbols: AtRABH1c, RABH1c | RAB GTPase homolog H1C | chr4:18506112-18507459 FORWARD LENGTH=645 215
Evalue: 9e-22 | Bitscore: 100
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 10/167 (5%) |
Tair |
Show Blast
|
| AT4G19640.1 |
| Symbols: Ara-7, AtRABF2b, AtRab5B, ARA7 | ARA7; GTP binding | chr4:10687451-10689459 REVERSE
Evalue: 2e-21 | Bitscore: 99
Identities = 62/196 (31%), Positives = 110/196 (56%), Gaps = 7/196 (3%) |
Tair |
Show Blast
|
| AT2G21880.1 |
| Symbols: AtRab7A, AtRABG2 | AtRABG2/AtRab7A (Arabidopsis Rab GTPase homolog G2); GTP binding | chr2:9331979-9333250
Evalue: 2e-21 | Bitscore: 99
Identities = 54/179 (30%), Positives = 91/179 (50%), Gaps = 10/179 (5%) |
Tair |
Show Blast
|
| AT4G19640.1 |
| Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B, ATRAB-F2B, RAB-F2B | Ras-related small GTP-binding family protein |
Evalue: 2e-21 | Bitscore: 99
Identities = 62/196 (31%), Positives = 110/196 (56%), Gaps = 7/196 (3%) |
Tair |
Show Blast
|
| AT2G21880.1 |
| Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase homolog 7A | chr2:9324899-9326170 REVERSE LENGTH=639 213
Evalue: 2e-21 | Bitscore: 99
Identities = 54/179 (30%), Positives = 91/179 (50%), Gaps = 10/179 (5%) |
Tair |
Show Blast
|
| AT5G39620.1 |
| Symbols: AtRABG1 | AtRABG1 (Arabidopsis Rab GTPase homolog G1); GTP binding | chr5:15881394-15883010 REVERSE
Evalue: 3e-21 | Bitscore: 98
Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 11/188 (5%) |
Tair |
Show Blast
|
| AT5G39620.1 |
| Symbols: AtRABG1, RABG1 | RAB GTPase homolog G1 | chr5:15864166-15865782 REVERSE LENGTH=615 205
Evalue: 4e-21 | Bitscore: 98
Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 11/188 (5%) |
Tair |
Show Blast
|
| AT1G22740.1 |
| Symbols: AtRABG3b, RAB7 | RAB7 (Ras-related protein 7); GTP binding | chr1:8049236-8050483 FORWARD
Evalue: 1e-20 | Bitscore: 96
Identities = 52/175 (29%), Positives = 89/175 (50%), Gaps = 10/175 (5%) |
Tair |
Show Blast
|
| AT1G22740.1 |
| Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RAB GTPase homolog G3B | chr1:8049247-8050494 FORWARD LENGTH=612 204
Evalue: 1e-20 | Bitscore: 96
Identities = 52/175 (29%), Positives = 89/175 (50%), Gaps = 10/175 (5%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
