- Gene ID
- Ot13g01140
- Locus
- Ot13g01140
- Functional Description
- putative nucleosome assembly protein (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom13
- Last Modified On
- 09 March 2010 10h45
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- putative nucleosome assembly protein (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
1.
nucleus
- Molecular Function
-
n/a
- Biological Process
-
1.
nucleosome assembly
Protein Domains
| Domain ID | Description | Database |
|---|
|
SSF143113 |
SSF143113 |
superfamily |
|
IPR002164 |
Nucleosome assembly protein (NAP) |
InterPro |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL56442.1 |
putative nucleosome assembly protein (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 691
Identities = 403/403 (100%), Positives = 403/403 (100%), Gaps = 0/403 (0%) |
NCBI |
Show Blast
|
| XP_001420927.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 2e-129 | Bitscore: 466
Identities = 245/302 (81%), Positives = 282/302 (93%), Gaps = 5/302 (1%) |
NCBI |
Show Blast
|
| Ol13g01060 |
+
Evalue: 1e-121 | Bitscore: 428
Identities = 234/313 (74%), Positives = 272/313 (86%), Gaps = 5/313 (1%) |
O.luci |
Show Blast
|
| XP_002503293.1 |
Nucleosome/chromatin assembly complex protein [Micromonas sp. RCC299]
Evalue: 2e-83 | Bitscore: 313
Identities = 180/327 (55%), Positives = 227/327 (69%), Gaps = 20/327 (6%) |
NCBI |
Show Blast
|
| XP_003058442.1 |
Nucleosome/chromatin assembly complex protein [Micromonas pusilla CCMP1545]
Evalue: 6e-100 | Bitscore: 309
Identities = 174/334 (52%), Positives = 223/334 (67%), Gaps = 23/334 (7%) |
NCBI |
Show Blast
|
| EEH56897.1 |
Nucleosome/chromatin assembly complex protein [Micromonas pusilla CCMP1545]
Evalue: 4e-82 | Bitscore: 309
Identities = 174/334 (52%), Positives = 223/334 (66%), Gaps = 23/334 (6%) |
NCBI |
Show Blast
|
| ACU23523.1 |
unknown [Glycine max]
Evalue: 3e-77 | Bitscore: 250
Identities = 151/283 (53%), Positives = 186/283 (66%), Gaps = 12/283 (4%) |
NCBI |
Show Blast
|
| ACU20915.1 |
unknown [Glycine max]
Evalue: 5e-77 | Bitscore: 249
Identities = 150/283 (53%), Positives = 186/283 (66%), Gaps = 12/283 (4%) |
NCBI |
Show Blast
|
| NP_001238314.1 |
nucleosome assembly protein 1 [Glycine max]
Evalue: 1e-76 | Bitscore: 248
Identities = 150/283 (53%), Positives = 186/283 (66%), Gaps = 12/283 (4%) |
NCBI |
Show Blast
|
| XP_001782782.1 |
nucleosome assembly protein family [Physcomitrella patens subsp. patens]
Evalue: 5e-63 | Bitscore: 246
Identities = 149/320 (46%), Positives = 205/320 (64%), Gaps = 15/320 (4%) |
NCBI |
Show Blast
|
| No hits found against database GOS with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL56442.1 |
putative nucleosome assembly protein (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 691
Identities = 403/403 (100%), Positives = 403/403 (100%), Gaps = 0/403 (0%) |
NCBI |
Show Blast
|
| XP_001420927.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 5e-162 | Bitscore: 466
Identities = 245/302 (81%), Positives = 282/302 (93%), Gaps = 5/302 (2%) |
NCBI |
Show Blast
|
| XP_001420927.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 2e-129 | Bitscore: 466
Identities = 245/302 (81%), Positives = 282/302 (93%), Gaps = 5/302 (1%) |
NCBI |
Show Blast
|
| XP_002503293.1 |
Nucleosome/chromatin assembly complex protein [Micromonas sp. RCC299]
Evalue: 1e-101 | Bitscore: 313
Identities = 180/327 (55%), Positives = 227/327 (69%), Gaps = 20/327 (6%) |
NCBI |
Show Blast
|
| XP_002503293.1 |
Nucleosome/chromatin assembly complex protein [Micromonas sp. RCC299]
Evalue: 2e-83 | Bitscore: 313
Identities = 180/327 (55%), Positives = 227/327 (69%), Gaps = 20/327 (6%) |
NCBI |
Show Blast
|
| XP_003058442.1 |
Nucleosome/chromatin assembly complex protein [Micromonas pusilla CCMP1545]
Evalue: 6e-100 | Bitscore: 309
Identities = 174/334 (52%), Positives = 223/334 (67%), Gaps = 23/334 (7%) |
NCBI |
Show Blast
|
| EEH56897.1 |
Nucleosome/chromatin assembly complex protein [Micromonas pusilla CCMP1545]
Evalue: 4e-82 | Bitscore: 309
Identities = 174/334 (52%), Positives = 223/334 (66%), Gaps = 23/334 (6%) |
NCBI |
Show Blast
|
| ACU23523.1 |
unknown [Glycine max]
Evalue: 3e-77 | Bitscore: 250
Identities = 151/283 (53%), Positives = 186/283 (66%), Gaps = 12/283 (4%) |
NCBI |
Show Blast
|
| ACU20915.1 |
unknown [Glycine max]
Evalue: 5e-77 | Bitscore: 249
Identities = 150/283 (53%), Positives = 186/283 (66%), Gaps = 12/283 (4%) |
NCBI |
Show Blast
|
| NP_001238314.1 |
nucleosome assembly protein 1 [Glycine max]
Evalue: 1e-76 | Bitscore: 248
Identities = 150/283 (53%), Positives = 186/283 (66%), Gaps = 12/283 (4%) |
NCBI |
Show Blast
|
| XP_001782782.1 |
nucleosome assembly protein family [Physcomitrella patens subsp. patens]
Evalue: 3e-75 | Bitscore: 246
Identities = 149/320 (47%), Positives = 205/320 (64%), Gaps = 15/320 (5%) |
NCBI |
Show Blast
|
| XP_001782782.1 |
nucleosome assembly protein family [Physcomitrella patens subsp. patens]
Evalue: 5e-63 | Bitscore: 246
Identities = 149/320 (46%), Positives = 205/320 (64%), Gaps = 15/320 (4%) |
NCBI |
Show Blast
|
| XP_002967533.1 |
hypothetical protein SELMODRAFT_87295 [Selaginella moellendorffii]
Evalue: 1e-73 | Bitscore: 240
Identities = 147/286 (51%), Positives = 187/286 (65%), Gaps = 12/286 (4%) |
NCBI |
Show Blast
|
| NP_194341.1 |
nucleosome assembly protein 1-like 1 [Arabidopsis thaliana]
Evalue: 7e-73 | Bitscore: 239
Identities = 154/304 (51%), Positives = 195/304 (64%), Gaps = 11/304 (4%) |
NCBI |
Show Blast
|
| AAA50234.1 |
nucleosome assembly protein I-like protein; similar to mouse nap I, PIR Accession Number JS0707 [Arabidopsis thaliana]
Evalue: 7e-73 | Bitscore: 239
Identities = 154/304 (51%), Positives = 195/304 (64%), Gaps = 11/304 (4%) |
NCBI |
Show Blast
|
| NP_001119060.1 |
NAP1;1 (NUCLEOSOME ASSEMBLY PROTEIN1;1); DNA binding [Arabidopsis thaliana]
Evalue: 8e-61 | Bitscore: 238
Identities = 154/304 (50%), Positives = 195/304 (64%), Gaps = 11/304 (3%) |
NCBI |
Show Blast
|
| NP_179538.1 |
NAP1;2 (NUCLEOSOME ASSEMBLY PROTEIN 1;2); DNA binding [Arabidopsis thaliana]
Evalue: 3e-60 | Bitscore: 236
Identities = 149/285 (52%), Positives = 184/285 (64%), Gaps = 9/285 (3%) |
NCBI |
Show Blast
|
| NP_001077917.1 |
NAP1;2 (NUCLEOSOME ASSEMBLY PROTEIN 1;2); DNA binding / binding [Arabidopsis thaliana]
Evalue: 3e-60 | Bitscore: 236
Identities = 149/285 (52%), Positives = 184/285 (64%), Gaps = 9/285 (3%) |
NCBI |
Show Blast
|
| ACU24430.1 |
unknown [Glycine max]
Evalue: 3e-60 | Bitscore: 236
Identities = 149/284 (52%), Positives = 186/284 (65%), Gaps = 11/284 (3%) |
NCBI |
Show Blast
|
| XP_002280211.1 |
PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]
Evalue: 1e-59 | Bitscore: 234
Identities = 146/285 (51%), Positives = 187/285 (65%), Gaps = 9/285 (3%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ol13g01060 |
+
Evalue: 1e-121 | Bitscore: 428
Identities = 234/313 (74%), Positives = 272/313 (86%), Gaps = 5/313 (1%) |
O.luci |
Show Blast
|
| No hits found against database Self with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q28EB4 |
Nucleosome assembly protein 1-like 1 OS=Xenopus tropicalis GN=nap1l1 PE=2 SV=1
Evalue: 5e-39 | Bitscore: 162
Identities = 120/315 (38%), Positives = 168/315 (53%), Gaps = 40/315 (12%) |
SwissP |
Show Blast
|
| Q28EB4 |
Nucleosome assembly protein 1-like 1 OS=Xenopus tropicalis GN=nap1l1 PE=2 SV=1
Evalue: 5e-39 | Bitscore: 162
Identities = 120/315 (38%), Positives = 168/315 (53%), Gaps = 40/315 (12%) |
SwissP |
Show Blast
|
| P28656 |
Nucleosome assembly protein 1-like 1 OS=Mus musculus GN=Nap1l1 PE=1 SV=2
Evalue: 6e-39 | Bitscore: 162
Identities = 116/315 (36%), Positives = 163/315 (51%), Gaps = 40/315 (12%) |
SwissP |
Show Blast
|
| P28656 |
Nucleosome assembly protein 1-like 1 OS=Mus musculus GN=Nap1l1 PE=1 SV=2
Evalue: 6e-39 | Bitscore: 162
Identities = 116/315 (36%), Positives = 163/315 (51%), Gaps = 40/315 (12%) |
SwissP |
Show Blast
|
| P55209 |
Nucleosome assembly protein 1-like 1 OS=Homo sapiens GN=NAP1L1 PE=1 SV=1
Evalue: 1e-37 | Bitscore: 157
Identities = 115/315 (36%), Positives = 162/315 (51%), Gaps = 40/315 (12%) |
SwissP |
Show Blast
|
| Q5R4D4 |
Nucleosome assembly protein 1-like 1 OS=Pongo abelii GN=NAP1L1 PE=2 SV=1
Evalue: 1e-37 | Bitscore: 157
Identities = 115/315 (36%), Positives = 162/315 (51%), Gaps = 40/315 (12%) |
SwissP |
Show Blast
|
| P55209 |
Nucleosome assembly protein 1-like 1 OS=Homo sapiens GN=NAP1L1 PE=1 SV=1
Evalue: 1e-37 | Bitscore: 157
Identities = 115/315 (36%), Positives = 162/315 (51%), Gaps = 40/315 (12%) |
SwissP |
Show Blast
|
| Q5R4D4 |
Nucleosome assembly protein 1-like 1 OS=Pongo abelii GN=NAP1L1 PE=2 SV=1
Evalue: 1e-37 | Bitscore: 157
Identities = 115/315 (36%), Positives = 162/315 (51%), Gaps = 40/315 (12%) |
SwissP |
Show Blast
|
| A6H767 |
Nucleosome assembly protein 1-like 1 OS=Bos taurus GN=NAP1L1 PE=2 SV=1
Evalue: 2e-37 | Bitscore: 156
Identities = 114/315 (36%), Positives = 162/315 (51%), Gaps = 40/315 (12%) |
SwissP |
Show Blast
|
| A6H767 |
Nucleosome assembly protein 1-like 1 OS=Bos taurus GN=NAP1L1 PE=2 SV=1
Evalue: 2e-37 | Bitscore: 156
Identities = 114/315 (36%), Positives = 162/315 (51%), Gaps = 40/315 (12%) |
SwissP |
Show Blast
|
| Q9Z2G8 |
Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus GN=Nap1l1 PE=2 SV=1
Evalue: 1e-36 | Bitscore: 154
Identities = 114/315 (36%), Positives = 161/315 (51%), Gaps = 41/315 (13%) |
SwissP |
Show Blast
|
| Q9Z2G8 |
Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus GN=Nap1l1 PE=2 SV=1
Evalue: 1e-36 | Bitscore: 154
Identities = 114/315 (36%), Positives = 161/315 (51%), Gaps = 41/315 (13%) |
SwissP |
Show Blast
|
| Q7ZY81 |
Nucleosome assembly protein 1-like 1-B OS=Xenopus laevis GN=nap1l1-B PE=1 SV=1
Evalue: 2e-36 | Bitscore: 154
Identities = 117/315 (37%), Positives = 169/315 (53%), Gaps = 40/315 (12%) |
SwissP |
Show Blast
|
| Q7ZY81 |
Nucleosome assembly protein 1-like 1-B OS=Xenopus laevis GN=nap1l1-b PE=1 SV=1
Evalue: 2e-36 | Bitscore: 154
Identities = 117/315 (37%), Positives = 169/315 (53%), Gaps = 40/315 (12%) |
SwissP |
Show Blast
|
| Q4U0Y4 |
Nucleosome assembly protein 1-like 1-A OS=Xenopus laevis GN=nap1l1-A PE=1 SV=1
Evalue: 6e-36 | Bitscore: 152
Identities = 113/314 (35%), Positives = 164/314 (52%), Gaps = 39/314 (12%) |
SwissP |
Show Blast
|
| Q4U0Y4 |
Nucleosome assembly protein 1-like 1-A OS=Xenopus laevis GN=nap1l1-a PE=1 SV=1
Evalue: 6e-36 | Bitscore: 152
Identities = 113/314 (35%), Positives = 164/314 (52%), Gaps = 39/314 (12%) |
SwissP |
Show Blast
|
| O59797 |
Putative nucleosome assembly protein C364.06 OS=Schizosaccharomyces pombe GN=SPCC364.06 PE=1 SV=1
Evalue: 8e-35 | Bitscore: 148
Identities = 108/301 (35%), Positives = 152/301 (50%), Gaps = 31/301 (10%) |
SwissP |
Show Blast
|
| O59797 |
Putative nucleosome assembly protein C364.06 OS=Schizosaccharomyces pombe (strain ATCC 38366 / 972) GN=SPCC364.06 PE=1 SV=1
Evalue: 8e-35 | Bitscore: 148
Identities = 108/301 (35%), Positives = 152/301 (50%), Gaps = 31/301 (10%) |
SwissP |
Show Blast
|
| Q78ZA7 |
Nucleosome assembly protein 1-like 4 OS=Mus musculus GN=Nap1l4 PE=1 SV=1
Evalue: 2e-34 | Bitscore: 147
Identities = 111/343 (32%), Positives = 162/343 (47%), Gaps = 42/343 (12%) |
SwissP |
Show Blast
|
| Q78ZA7 |
Nucleosome assembly protein 1-like 4 OS=Mus musculus GN=Nap1l4 PE=1 SV=1
Evalue: 2e-34 | Bitscore: 147
Identities = 111/343 (32%), Positives = 162/343 (47%), Gaps = 42/343 (12%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT4G26110.2 |
| Symbols: NAP1;1 | NAP1;1 (NUCLEOSOME ASSEMBLY PROTEIN1;1) | chr4:13232721-13235069 FORWARD
Evalue: 2e-57 | Bitscore: 219
Identities = 144/305 (47%), Positives = 185/305 (60%), Gaps = 11/305 (3%) |
Tair |
Show Blast
|
| AT4G26110.2 |
| Symbols: NAP1;1 | nucleosome assembly protein1;1 | chr4:13232712-13235060 FORWARD LENGTH=1080 360
Evalue: 3e-57 | Bitscore: 219
Identities = 144/305 (47%), Positives = 185/305 (60%), Gaps = 11/305 (3%) |
Tair |
Show Blast
|
| AT4G26110.1 |
| Symbols: NAP1;1 | NAP1;1 (NUCLEOSOME ASSEMBLY PROTEIN1;1); DNA binding | chr4:13232721-13235511 FORWARD
Evalue: 9e-57 | Bitscore: 217
Identities = 144/305 (47%), Positives = 184/305 (60%), Gaps = 11/305 (3%) |
Tair |
Show Blast
|
| AT4G26110.1 |
| Symbols: NAP1;1, ATNAP1;1 | nucleosome assembly protein1;1 | chr4:13232712-13235502 FORWARD LENGTH=1119 373
Evalue: 1e-56 | Bitscore: 217
Identities = 144/305 (47%), Positives = 184/305 (60%), Gaps = 11/305 (3%) |
Tair |
Show Blast
|
| AT5G56950.1 |
| Symbols: NAP1;3, NFA3 | NAP1;3/NFA3 (NUCLEOSOME ASSEMBLY PROTEIN1;3); DNA binding | chr5:23049844-23052525
Evalue: 2e-56 | Bitscore: 216
Identities = 137/285 (48%), Positives = 176/285 (61%), Gaps = 9/285 (3%) |
Tair |
Show Blast
|
| AT5G56950.1 |
| Symbols: NFA03, NFA3, NAP1;3 | nucleosome assembly protein 1;3 | chr5:23032618-23035299 FORWARD LENGTH=1125 375
Evalue: 2e-56 | Bitscore: 216
Identities = 137/285 (48%), Positives = 176/285 (61%), Gaps = 9/285 (3%) |
Tair |
Show Blast
|
| AT2G19480.1 |
| Symbols: NAP1;2, NFA2 | NAP1;2/NFA2 (NUCLEOSOME ASSEMBLY PROTEIN1;2); DNA binding | chr2:8445683-8448122 FORWARD
Evalue: 5e-56 | Bitscore: 215
Identities = 139/285 (48%), Positives = 173/285 (60%), Gaps = 9/285 (3%) |
Tair |
Show Blast
|
| AT2G19480.2 |
| Symbols: NAP1;2, NFA2 | NAP1;2/NFA2 (NUCLEOSOME ASSEMBLY PROTEIN1;2) | chr2:8445683-8448122 FORWARD
Evalue: 5e-56 | Bitscore: 215
Identities = 139/285 (48%), Positives = 173/285 (60%), Gaps = 9/285 (3%) |
Tair |
Show Blast
|
| AT2G19480.1 |
| Symbols: NFA02, NFA2, NAP1;2 | nucleosome assembly protein 1;2 | chr2:8438601-8441040 FORWARD LENGTH=1140 380
Evalue: 6e-56 | Bitscore: 215
Identities = 139/285 (48%), Positives = 173/285 (60%), Gaps = 9/285 (3%) |
Tair |
Show Blast
|
| AT2G19480.2 |
| Symbols: NFA02, NFA2, NAP1;2 | nucleosome assembly protein 1;2 | chr2:8438601-8441040 FORWARD LENGTH=1122 374
Evalue: 6e-56 | Bitscore: 215
Identities = 139/285 (48%), Positives = 173/285 (60%), Gaps = 9/285 (3%) |
Tair |
Show Blast
|
| AT2G19480.3 |
| Symbols: NAP1;2 | nucleosome assembly protein 1;2 | chr2:8438601-8441040 FORWARD LENGTH=1119 373
Evalue: 8e-56 | Bitscore: 214
Identities = 139/285 (48%), Positives = 173/285 (60%), Gaps = 9/285 (3%) |
Tair |
Show Blast
|
| AT3G13782.1 |
| Symbols: NAP1;4 | NAP1;4 (NUCLEOSOME ASSEMBLY PROTEIN1;4); DNA binding | chr3:4526667-4528405 FORWARD
Evalue: 4e-47 | Bitscore: 185
Identities = 116/271 (42%), Positives = 158/271 (58%), Gaps = 27/271 (9%) |
Tair |
Show Blast
|
| AT3G13782.1 |
| Symbols: NFA04, NAP1;4, NFA4 | nucleosome assembly protein1;4 | chr3:4526660-4528398 FORWARD LENGTH=954 318
Evalue: 1e-46 | Bitscore: 184
Identities = 120/286 (41%), Positives = 163/286 (56%), Gaps = 27/286 (9%) |
Tair |
Show Blast
|
| AT1G18800.1 |
| Symbols: NRP2 | NRP2 (NAP1-RELATED PROTEIN 2); DNA binding / chromatin binding / histone binding |
Evalue: 6e-12 | Bitscore: 68
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 42/238 (17%) |
Tair |
Show Blast
|
| AT1G18800.1 |
| Symbols: NRP2 | NAP1-related protein 2 | chr1:6481466-6483463 REVERSE LENGTH=771 257
Evalue: 6e-12 | Bitscore: 68
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 42/238 (17%) |
Tair |
Show Blast
|
| AT1G74560.3 |
| Symbols: NRP1 | NRP1 (NAP1-RELATED PROTEIN 1) | chr1:28021424-28023561 REVERSE
Evalue: 9e-11 | Bitscore: 64
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 49/233 (21%) |
Tair |
Show Blast
|
| AT1G74560.2 |
| Symbols: NRP1 | NRP1 (NAP1-RELATED PROTEIN 1); DNA binding | chr1:28021476-28023561 REVERSE
Evalue: 1e-10 | Bitscore: 64
Identities = 60/230 (26%), Positives = 94/230 (40%), Gaps = 44/230 (19%) |
Tair |
Show Blast
|
| AT1G74560.3 |
| Symbols: NRP1 | NAP1-related protein 1 | chr1:28017763-28019900 REVERSE LENGTH=795 265
Evalue: 1e-10 | Bitscore: 64
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 49/233 (21%) |
Tair |
Show Blast
|
| AT1G74560.2 |
| Symbols: NRP1 | NAP1-related protein 1 | chr1:28017815-28019900 REVERSE LENGTH=774 258
Evalue: 2e-10 | Bitscore: 64
Identities = 60/230 (26%), Positives = 94/230 (40%), Gaps = 44/230 (19%) |
Tair |
Show Blast
|
| AT1G74560.1 |
| Symbols: NRP1 | NRP1 (NAP1-RELATED PROTEIN 1); DNA binding / chromatin binding / histone binding |
Evalue: 4e-10 | Bitscore: 62
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 49/233 (21%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
