- Gene ID
- Ot09g02660
- Locus
- Ot09g02660
- Functional Description
- pantoate--beta-alanine ligase [Oryza sativa (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom09
- Last Modified On
- 09 March 2010 7h14
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- pantoate--beta-alanine ligase [Oryza sativa (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
pantoate-beta-alanine ligase activity
- Biological Process
-
1.
pantothenate biosynthetic process
Protein Domains
| Domain ID | Description | Database |
|---|
|
IPR014729 |
Rossmann-like alpha/beta/alpha sandwich fold |
InterPro |
|
IPR003721 |
Pantoate-beta-alanine ligase |
InterPro |
|
SSF52374 |
Nucleotidylyl transferase |
superfamily |
|
PTHR21299 |
CYTIDYLATE KINASE/PANTOATE-BETA-ALANINE LIGASE |
HMMPanther |
|
G3DSA:3.30.1300.10 |
no description |
Gene3D |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL55425.1 |
pantoate--beta-alanine ligase (ISS) [Ostreococcus tauri]
Evalue: 9e-170 | Bitscore: 600
Identities = 291/291 (100%), Positives = 291/291 (100%), Gaps = 0/291 (0%) |
NCBI |
Show Blast
|
| CAL57967.1 |
pantoate--beta-alanine ligase (ISS) [Ostreococcus tauri]
Evalue: 4e-158 | Bitscore: 561
Identities = 272/274 (99%), Positives = 272/274 (99%), Gaps = 0/274 (0%) |
NCBI |
Show Blast
|
| Ot17g02400 |
chrom17.0001 [350749..350831,350890..351796]
Evalue: 1e-152 | Bitscore: 533
Identities = 272/274 (99%), Positives = 272/274 (99%) |
Self |
Show Blast
|
| XP_001419794.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 4e-109 | Bitscore: 398
Identities = 207/288 (71%), Positives = 231/288 (80%), Gaps = 5/288 (1%) |
NCBI |
Show Blast
|
| EAH93957.1 |
unknown [environmental sequence]
Evalue: 1e-105 | Bitscore: 380
Identities = 197/283 (69%), Positives = 225/283 (79%), Gaps = 3/283 (1%) |
GOS |
Show Blast
|
| CAJ57403.1 |
putative pantoate-beta-alanine ligase [Physcomitrella patens subsp. patens]
Evalue: 9e-81 | Bitscore: 304
Identities = 152/285 (53%), Positives = 194/285 (68%), Gaps = 5/285 (1%) |
NCBI |
Show Blast
|
| XP_001755230.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 1e-80 | Bitscore: 303
Identities = 152/285 (53%), Positives = 194/285 (68%), Gaps = 5/285 (1%) |
NCBI |
Show Blast
|
| AAM62758.1 |
pantoate-beta-alanine ligase [Arabidopsis thaliana]
Evalue: 2e-78 | Bitscore: 296
Identities = 157/304 (51%), Positives = 193/304 (63%), Gaps = 25/304 (8%) |
NCBI |
Show Blast
|
| NP_199695.1 |
PANC (ARABIDOPSIS HOMOLOG OF BACTERIAL PANC); pantoate-beta-alanine ligase/ protein homodimerization [Arabidopsis thaliana]
Evalue: 6e-78 | Bitscore: 295
Identities = 156/304 (51%), Positives = 192/304 (63%), Gaps = 25/304 (8%) |
NCBI |
Show Blast
|
| XP_002466086.1 |
hypothetical protein SORBIDRAFT_01g000970 [Sorghum bicolor]
Evalue: 1e-77 | Bitscore: 293
Identities = 165/308 (53%), Positives = 192/308 (62%), Gaps = 22/308 (7%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAH93957.1 |
unknown [environmental sequence]
Evalue: 1e-105 | Bitscore: 380
Identities = 197/283 (69%), Positives = 225/283 (79%), Gaps = 3/283 (1%) |
GOS |
Show Blast
|
| EAJ60495.1 |
unknown [environmental sequence]
Evalue: 7e-56 | Bitscore: 217
Identities = 125/283 (44%), Positives = 168/283 (59%), Gaps = 5/283 (1%) |
GOS |
Show Blast
|
| EAH95477.1 |
unknown [environmental sequence]
Evalue: 1e-54 | Bitscore: 213
Identities = 120/270 (44%), Positives = 162/270 (60%), Gaps = 2/270 (0%) |
GOS |
Show Blast
|
| EAJ56715.1 |
unknown [environmental sequence]
Evalue: 1e-54 | Bitscore: 213
Identities = 120/270 (44%), Positives = 162/270 (60%), Gaps = 2/270 (0%) |
GOS |
Show Blast
|
| EAJ33888.1 |
unknown [environmental sequence]
Evalue: 3e-54 | Bitscore: 212
Identities = 113/260 (43%), Positives = 154/260 (59%), Gaps = 5/260 (1%) |
GOS |
Show Blast
|
| EAJ85451.1 |
unknown [environmental sequence]
Evalue: 2e-52 | Bitscore: 205
Identities = 120/281 (42%), Positives = 158/281 (56%), Gaps = 21/281 (7%) |
GOS |
Show Blast
|
| EAJ35959.1 |
unknown [environmental sequence]
Evalue: 4e-48 | Bitscore: 191
Identities = 115/289 (39%), Positives = 160/289 (55%), Gaps = 18/289 (6%) |
GOS |
Show Blast
|
| EAJ84745.1 |
unknown [environmental sequence]
Evalue: 8e-47 | Bitscore: 187
Identities = 122/285 (42%), Positives = 157/285 (55%), Gaps = 11/285 (3%) |
GOS |
Show Blast
|
| EAJ44224.1 |
unknown [environmental sequence]
Evalue: 1e-46 | Bitscore: 186
Identities = 100/259 (38%), Positives = 152/259 (58%), Gaps = 9/259 (3%) |
GOS |
Show Blast
|
| EAG28281.1 |
unknown [environmental sequence]
Evalue: 3e-46 | Bitscore: 184
Identities = 93/214 (43%), Positives = 131/214 (61%), Gaps = 4/214 (1%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL55425.1 |
pantoate--beta-alanine ligase (ISS) [Ostreococcus tauri]
Evalue: 9e-170 | Bitscore: 600
Identities = 291/291 (100%), Positives = 291/291 (100%), Gaps = 0/291 (0%) |
NCBI |
Show Blast
|
| CAL57967.1 |
pantoate--beta-alanine ligase (ISS) [Ostreococcus tauri]
Evalue: 4e-158 | Bitscore: 561
Identities = 272/274 (99%), Positives = 272/274 (99%), Gaps = 0/274 (0%) |
NCBI |
Show Blast
|
| XP_001419794.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 4e-109 | Bitscore: 398
Identities = 207/288 (71%), Positives = 231/288 (80%), Gaps = 5/288 (1%) |
NCBI |
Show Blast
|
| CAJ57403.1 |
putative pantoate-beta-alanine ligase [Physcomitrella patens subsp. patens]
Evalue: 9e-81 | Bitscore: 304
Identities = 152/285 (53%), Positives = 194/285 (68%), Gaps = 5/285 (1%) |
NCBI |
Show Blast
|
| XP_001755230.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 1e-80 | Bitscore: 303
Identities = 152/285 (53%), Positives = 194/285 (68%), Gaps = 5/285 (1%) |
NCBI |
Show Blast
|
| AAM62758.1 |
pantoate-beta-alanine ligase [Arabidopsis thaliana]
Evalue: 2e-78 | Bitscore: 296
Identities = 157/304 (51%), Positives = 193/304 (63%), Gaps = 25/304 (8%) |
NCBI |
Show Blast
|
| NP_199695.1 |
PANC (ARABIDOPSIS HOMOLOG OF BACTERIAL PANC); pantoate-beta-alanine ligase/ protein homodimerization [Arabidopsis thaliana]
Evalue: 6e-78 | Bitscore: 295
Identities = 156/304 (51%), Positives = 192/304 (63%), Gaps = 25/304 (8%) |
NCBI |
Show Blast
|
| XP_002466086.1 |
hypothetical protein SORBIDRAFT_01g000970 [Sorghum bicolor]
Evalue: 1e-77 | Bitscore: 293
Identities = 165/308 (53%), Positives = 192/308 (62%), Gaps = 22/308 (7%) |
NCBI |
Show Blast
|
| NP_001051918.1 |
Os03g0851800 [Oryza sativa (japonica cultivar-group)] sp|O24210.2|PANC_ORYSJ RecName: Full=Pantoate--beta-alanine ligase; AltName: Full=Pantothenate
Evalue: 2e-77 | Bitscore: 293
Identities = 165/306 (53%), Positives = 202/306 (66%), Gaps = 24/306 (7%) |
NCBI |
Show Blast
|
| CBI37277.1 |
unnamed protein product [Vitis vinifera]
Evalue: 2e-75 | Bitscore: 286
Identities = 154/285 (54%), Positives = 192/285 (67%), Gaps = 8/285 (2%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot17g02400 |
chrom17.0001 [350749..350831,350890..351796]
Evalue: 1e-152 | Bitscore: 533
Identities = 272/274 (99%), Positives = 272/274 (99%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q9FKB3 |
Pantoate--beta-alanine ligase OS=Arabidopsis thaliana GN=At5g48840 PE=2 SV=1
Evalue: 5e-77 | Bitscore: 288
Identities = 156/304 (51%), Positives = 192/304 (63%), Gaps = 25/304 (8%) |
SwissP |
Show Blast
|
| O24210 |
Pantoate--beta-alanine ligase OS=Oryza sativa subsp. japonica GN=PANC PE=2 SV=2
Evalue: 8e-76 | Bitscore: 284
Identities = 165/306 (53%), Positives = 202/306 (66%), Gaps = 24/306 (7%) |
SwissP |
Show Blast
|
| O24035 |
Pantoate--beta-alanine ligase OS=Lotus japonicus GN=PANC PE=1 SV=3
Evalue: 3e-74 | Bitscore: 278
Identities = 144/302 (47%), Positives = 190/302 (62%), Gaps = 25/302 (8%) |
SwissP |
Show Blast
|
| B8FJ17 |
Pantothenate synthetase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=panC PE=3 SV=1
Evalue: 2e-65 | Bitscore: 249
Identities = 130/281 (46%), Positives = 180/281 (64%), Gaps = 8/281 (2%) |
SwissP |
Show Blast
|
| B0TBP5 |
Pantothenate synthetase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=panC PE=3 SV=1
Evalue: 3e-65 | Bitscore: 249
Identities = 137/284 (48%), Positives = 179/284 (63%), Gaps = 8/284 (2%) |
SwissP |
Show Blast
|
| C4XPZ7 |
Pantothenate synthetase OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=panC PE=3 SV=1
Evalue: 9e-64 | Bitscore: 244
Identities = 138/286 (48%), Positives = 185/286 (64%), Gaps = 17/286 (5%) |
SwissP |
Show Blast
|
| A3DDV6 |
Pantothenate synthetase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=panC PE=3 SV=1
Evalue: 3e-63 | Bitscore: 242
Identities = 128/284 (45%), Positives = 186/284 (65%), Gaps = 11/284 (3%) |
SwissP |
Show Blast
|
| Q74CG7 |
Pantothenate synthetase OS=Geobacter sulfurreducens GN=panC PE=3 SV=1
Evalue: 2e-61 | Bitscore: 236
Identities = 130/281 (46%), Positives = 169/281 (60%), Gaps = 8/281 (2%) |
SwissP |
Show Blast
|
| A7HND1 |
Pantothenate synthetase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=panC PE=3 SV=1
Evalue: 2e-61 | Bitscore: 236
Identities = 130/285 (45%), Positives = 174/285 (61%), Gaps = 7/285 (2%) |
SwissP |
Show Blast
|
| Q9X0G6 |
Pantothenate synthetase OS=Thermotoga maritima GN=panC PE=1 SV=1
Evalue: 3e-60 | Bitscore: 232
Identities = 131/283 (46%), Positives = 180/283 (63%), Gaps = 11/283 (3%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT5G48840.1 |
| Symbols: PANC | PANC (Arabidopsis homolog of bacterial panC); pantoate-beta-alanine ligase | chr5:19821049-19822267
Evalue: 4e-78 | Bitscore: 288
Identities = 156/304 (51%), Positives = 192/304 (63%), Gaps = 25/304 (8%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
| EST ID | CTZ02-B10.x1d-t |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 393717..394422,515780..515802 |
Strand - |
| EST ID | CTZ02-E03.x1d-t |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 393704..394422,515780..515802 |
Strand - |
| EST ID | CTZ02-G09.x1d-t |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 393861..394422,515780..515802 |
Strand - |
| EST ID | CTZ03-D05.x1d-t |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 393683..394422,515780..515802 |
Strand - |
| EST ID | CTZ04-B10.x1d-t |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 393708..394422,515780..515802 |
Strand - |
| EST ID | CTZ10-E09.x1d-t |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 393727..394422,515780..515802 |
Strand - |
| EST ID | CTZ11-C09.x1d-t |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 393697..394422,515780..515802 |
Strand - |
| EST ID | CTZ12-B12.x1d-t |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 393752..394422,515780..515802 |
Strand - |
| EST ID | CTZ12-G08.x1d-t |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 393712..394422,515780..515802 |
Strand - |
| EST ID | CTZ20-B09.x1d-t |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 393697..394422,515780..515802 |
Strand - |
| EST ID | CTZ25-C04.x1d-t |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 393698..394422,515780..515802 |
Strand - |
| EST ID | CTZ26-C05.x1d-t |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 393691..394422,515780..515802 |
Strand - |
| EST ID | CTZ97-B05.x1d-t |
Support Model | N |
More Info |
| Comment | EST is not matching the given gene model. |
| Mapping Location | 393976..394422,515780..515802 |
Strand - |
|
