- Gene ID
- Ot08g01330
- Locus
- Ot08g01330
- Functional Description
- Actin-related protein Arp2/3 complex, subunit Arp2 (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom08
- Last Modified On
- 09 March 2010 5h45
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
| Sorry, only history comparison allowed for non logged in users!! |
Compare this version with :
Go! |
Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- Actin-related protein Arp2/3 complex, subunit Arp2 (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
protein binding
- Biological Process
-
n/a
Protein Domains
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL54872.1 |
Actin-related protein Arp2/3 complex, subunit Arp2 (ISS) [Ostreococcus tauri]
Evalue: 1e-108 | Bitscore: 395
Identities = 192/192 (100%), Positives = 192/192 (100%), Gaps = 0/192 (0%) |
NCBI |
Show Blast
|
| XP_001419100.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 7e-73 | Bitscore: 276
Identities = 135/186 (72%), Positives = 155/186 (83%), Gaps = 3/186 (1%) |
NCBI |
Show Blast
|
| XP_002502927.1 |
actin superfamily [Micromonas sp. RCC299]
Evalue: 5e-22 | Bitscore: 107
Identities = 62/149 (41%), Positives = 83/149 (55%), Gaps = 7/149 (4%) |
NCBI |
Show Blast
|
| XP_664613.1 |
hypothetical protein AN7009.2 [Aspergillus nidulans FGSC A4] sp|Q5AXH1.1|ARP6_EMENI RecName: Full=Actin-like protein arp6
Evalue: 5e-21 | Bitscore: 104
Identities = 56/128 (43%), Positives = 77/128 (60%), Gaps = 2/128 (1%) |
NCBI |
Show Blast
|
| EER28360.1 |
Actin family protein [Coccidioides posadasii C735 delta SOWgp]
Evalue: 6e-21 | Bitscore: 104
Identities = 53/119 (44%), Positives = 73/119 (61%), Gaps = 2/119 (1%) |
NCBI |
Show Blast
|
| XP_001241460.1 |
hypothetical protein CIMG_08623 [Coccidioides immitis RS]
Evalue: 6e-21 | Bitscore: 104
Identities = 53/119 (44%), Positives = 73/119 (61%), Gaps = 2/119 (1%) |
NCBI |
Show Blast
|
| XP_002559114.1 |
Pc13g06810 [Penicillium chrysogenum Wisconsin 54-1255]
Evalue: 8e-21 | Bitscore: 103
Identities = 53/119 (44%), Positives = 73/119 (61%), Gaps = 2/119 (1%) |
NCBI |
Show Blast
|
| EEH45075.1 |
actin family protein [Paracoccidioides brasiliensis Pb18]
Evalue: 1e-20 | Bitscore: 103
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 2/126 (1%) |
NCBI |
Show Blast
|
| EEH20504.1 |
conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Evalue: 1e-20 | Bitscore: 103
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 2/126 (1%) |
NCBI |
Show Blast
|
| EEH57280.1 |
actin superfamily [Micromonas pusilla CCMP1545]
Evalue: 1e-20 | Bitscore: 103
Identities = 65/147 (44%), Positives = 87/147 (59%), Gaps = 11/147 (7%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAK11583.1 |
unknown [environmental sequence]
Evalue: 2e-11 | Bitscore: 68
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 3/123 (2%) |
GOS |
Show Blast
|
| EAF55222.1 |
unknown [environmental sequence]
Evalue: 4e-11 | Bitscore: 67
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 2/105 (1%) |
GOS |
Show Blast
|
| EAB74616.1 |
unknown [environmental sequence]
Evalue: 2e-10 | Bitscore: 65
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 3/130 (2%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL54872.1 |
Actin-related protein Arp2/3 complex, subunit Arp2 (ISS) [Ostreococcus tauri]
Evalue: 1e-108 | Bitscore: 395
Identities = 192/192 (100%), Positives = 192/192 (100%), Gaps = 0/192 (0%) |
NCBI |
Show Blast
|
| XP_001419100.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 7e-73 | Bitscore: 276
Identities = 135/186 (72%), Positives = 155/186 (83%), Gaps = 3/186 (1%) |
NCBI |
Show Blast
|
| XP_002502927.1 |
actin superfamily [Micromonas sp. RCC299]
Evalue: 5e-22 | Bitscore: 107
Identities = 62/149 (41%), Positives = 83/149 (55%), Gaps = 7/149 (4%) |
NCBI |
Show Blast
|
| XP_664613.1 |
hypothetical protein AN7009.2 [Aspergillus nidulans FGSC A4] sp|Q5AXH1.1|ARP6_EMENI RecName: Full=Actin-like protein arp6
Evalue: 5e-21 | Bitscore: 104
Identities = 56/128 (43%), Positives = 77/128 (60%), Gaps = 2/128 (1%) |
NCBI |
Show Blast
|
| EER28360.1 |
Actin family protein [Coccidioides posadasii C735 delta SOWgp]
Evalue: 6e-21 | Bitscore: 104
Identities = 53/119 (44%), Positives = 73/119 (61%), Gaps = 2/119 (1%) |
NCBI |
Show Blast
|
| XP_001241460.1 |
hypothetical protein CIMG_08623 [Coccidioides immitis RS]
Evalue: 6e-21 | Bitscore: 104
Identities = 53/119 (44%), Positives = 73/119 (61%), Gaps = 2/119 (1%) |
NCBI |
Show Blast
|
| XP_002559114.1 |
Pc13g06810 [Penicillium chrysogenum Wisconsin 54-1255]
Evalue: 8e-21 | Bitscore: 103
Identities = 53/119 (44%), Positives = 73/119 (61%), Gaps = 2/119 (1%) |
NCBI |
Show Blast
|
| EEH45075.1 |
actin family protein [Paracoccidioides brasiliensis Pb18]
Evalue: 1e-20 | Bitscore: 103
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 2/126 (1%) |
NCBI |
Show Blast
|
| EEH20504.1 |
conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Evalue: 1e-20 | Bitscore: 103
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 2/126 (1%) |
NCBI |
Show Blast
|
| EEH57280.1 |
actin superfamily [Micromonas pusilla CCMP1545]
Evalue: 1e-20 | Bitscore: 103
Identities = 65/147 (44%), Positives = 87/147 (59%), Gaps = 11/147 (7%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot16g00370 |
chrom16.0001 [46940..47431,47596..48594] inframe stop codon
Evalue: 1e-11 | Bitscore: 64
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 3/123 (2%) |
Self |
Show Blast
|
| Ot14g03380 |
chrom14.0001 [487878..489098]
Evalue: 5e-09 | Bitscore: 55
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 13/134 (9%) |
Self |
Show Blast
|
| Ot14g02140 |
chrom14.0001 [311572..311973]
Evalue: 1e-05 | Bitscore: 44
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 13/121 (10%) |
Self |
Show Blast
|
| Ot01g02250 |
chrom01.0001 [333838..335071,335131..335603,335654..335731,
Evalue: 3e-05 | Bitscore: 43
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 3/74 (4%) |
Self |
Show Blast
|
| Ot04g02770 |
chrom04.0001 [420073..421347]
Evalue: 0.0001 | Bitscore: 41
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 18/145 (12%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q5AXH1 |
Actin-like protein arp6 OS=Emericella nidulans GN=arp6 PE=3 SV=1
Evalue: 3e-21 | Bitscore: 101
Identities = 56/128 (43%), Positives = 77/128 (60%), Gaps = 2/128 (1%) |
SwissP |
Show Blast
|
| Q5NBI2 |
Actin-related protein 6 OS=Oryza sativa subsp. japonica GN=ARP6 PE=2 SV=1
Evalue: 2e-20 | Bitscore: 99
Identities = 53/128 (41%), Positives = 74/128 (57%), Gaps = 5/128 (3%) |
SwissP |
Show Blast
|
| A2WNB0 |
Actin-related protein 6 OS=Oryza sativa subsp. indica GN=ARP6 PE=2 SV=1
Evalue: 2e-20 | Bitscore: 99
Identities = 53/128 (41%), Positives = 74/128 (57%), Gaps = 5/128 (3%) |
SwissP |
Show Blast
|
| Q54KZ7 |
Actin-related protein 6 OS=Dictyostelium discoideum GN=arpF PE=3 SV=1
Evalue: 7e-20 | Bitscore: 96
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 7/126 (5%) |
SwissP |
Show Blast
|
| Q4W9M3 |
Actin-like protein arp6 OS=Aspergillus fumigatus GN=arp6 PE=3 SV=1
Evalue: 1e-19 | Bitscore: 95
Identities = 52/119 (43%), Positives = 70/119 (58%), Gaps = 2/119 (1%) |
SwissP |
Show Blast
|
| Q8LGE3 |
Actin-related protein 6 OS=Arabidopsis thaliana GN=ARP6 PE=1 SV=1
Evalue: 3e-19 | Bitscore: 94
Identities = 49/128 (38%), Positives = 75/128 (58%), Gaps = 5/128 (3%) |
SwissP |
Show Blast
|
| Q9D864 |
Actin-related protein 6 OS=Mus musculus GN=Actr6 PE=2 SV=2
Evalue: 1e-16 | Bitscore: 86
Identities = 48/129 (37%), Positives = 75/129 (58%), Gaps = 3/129 (2%) |
SwissP |
Show Blast
|
| Q9GZN1 |
Actin-related protein 6 OS=Homo sapiens GN=ACTR6 PE=1 SV=1
Evalue: 1e-16 | Bitscore: 85
Identities = 48/129 (37%), Positives = 75/129 (58%), Gaps = 3/129 (2%) |
SwissP |
Show Blast
|
| P45890 |
Actin-like protein 13E OS=Drosophila melanogaster GN=Actr13E PE=1 SV=1
Evalue: 3e-16 | Bitscore: 84
Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 7/126 (5%) |
SwissP |
Show Blast
|
| Q9DEE9 |
Actin-related protein 6 OS=Gallus gallus GN=ACTR6 PE=2 SV=1
Evalue: 6e-16 | Bitscore: 84
Identities = 44/120 (36%), Positives = 71/120 (59%), Gaps = 3/120 (2%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT3G33520.1 |
| Symbols: ARP6, SUF3, ESD1, ATARP6 | ATARP6; structural constituent of cytoskeleton | chr3:14104777-14106462
Evalue: 3e-20 | Bitscore: 94
Identities = 49/128 (38%), Positives = 75/128 (58%), Gaps = 5/128 (3%) |
Tair |
Show Blast
|
| AT2G37620.2 |
| Symbols: AAC1, ACT1 | ACT1 (ACTIN 1); structural constituent of cytoskeleton | chr2:15786839-15788319 FORWARD
Evalue: 2e-11 | Bitscore: 65
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 3/130 (2%) |
Tair |
Show Blast
|
| AT3G53750.1 |
| Symbols: ACT3 | ACT3 (ACTIN 3); structural constituent of cytoskeleton | chr3:19926902-19928349 FORWARD
Evalue: 2e-11 | Bitscore: 65
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 3/130 (2%) |
Tair |
Show Blast
|
| AT2G37620.1 |
| Symbols: AAC1, ACT1 | ACT1 (ACTIN 1); structural constituent of cytoskeleton | chr2:15786839-15788319 FORWARD
Evalue: 2e-11 | Bitscore: 65
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 3/130 (2%) |
Tair |
Show Blast
|
| AT5G09810.1 |
| Symbols: ACT2/7, ACT7 | ACT7 (actin 7) | chr5:3052810-3054221 FORWARD
Evalue: 3e-11 | Bitscore: 65
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 3/130 (2%) |
Tair |
Show Blast
|
| AT2G42090.1 |
| Symbols: ACT9 | ACT9 (ACTIN 9); structural constituent of cytoskeleton | chr2:17563822-17565447 FORWARD
Evalue: 3e-11 | Bitscore: 65
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 3/130 (2%) |
Tair |
Show Blast
|
| AT3G12110.1 |
| Symbols: ACT11 | ACT11 (ACTIN-11); structural constituent of cytoskeleton | chr3:3858122-3859615 FORWARD
Evalue: 3e-11 | Bitscore: 64
Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 3/130 (2%) |
Tair |
Show Blast
|
| AT2G42170.1 |
| Symbols: | actin, putative | chr2:17585761-17587300 FORWARD
Evalue: 1e-10 | Bitscore: 62
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 3/130 (2%) |
Tair |
Show Blast
|
| AT3G12380.1 |
| Symbols: ATARP5 | ATARP5 (ACTIN-RELATED PROTEIN 5) | chr3:3938316-3940717 REVERSE
Evalue: 2e-10 | Bitscore: 62
Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 5/126 (3%) |
Tair |
Show Blast
|
| AT1G49240.1 |
| Symbols: ACT8 | ACT8 (ACTIN 8); structural constituent of cytoskeleton | chr1:18220207-18221615 FORWARD
Evalue: 4e-10 | Bitscore: 60
Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 3/123 (2%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
