- Gene ID
- Ot06g02750
- Locus
- Ot06g02750
- Functional Description
- actin -like protein (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom06
- Last Modified On
- 09 March 2010 3h34
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- actin -like protein (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
protein binding
- Biological Process
-
n/a
Protein Domains
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL53534.1 |
actin-like protein (ISS) [Ostreococcus tauri]
Evalue: 3e-169 | Bitscore: 598
Identities = 342/342 (100%), Positives = 342/342 (100%), Gaps = 0/342 (0%) |
NCBI |
Show Blast
|
| XP_001418472.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 2e-105 | Bitscore: 386
Identities = 218/348 (62%), Positives = 252/348 (72%), Gaps = 7/348 (2%) |
NCBI |
Show Blast
|
| XP_001752236.1 |
actin-related protein ARP7 [Physcomitrella patens subsp. patens]
Evalue: 1e-33 | Bitscore: 147
Identities = 93/306 (30%), Positives = 155/306 (50%), Gaps = 17/306 (5%) |
NCBI |
Show Blast
|
| XP_001778293.1 |
actin-related protein ARP7 [Physcomitrella patens subsp. patens]
Evalue: 2e-32 | Bitscore: 143
Identities = 91/306 (29%), Positives = 151/306 (49%), Gaps = 17/306 (5%) |
NCBI |
Show Blast
|
| XP_002499766.1 |
actin superfamily [Micromonas sp. RCC299]
Evalue: 6e-32 | Bitscore: 142
Identities = 128/346 (36%), Positives = 175/346 (50%), Gaps = 15/346 (4%) |
NCBI |
Show Blast
|
| XP_002278255.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 2e-31 | Bitscore: 140
Identities = 96/305 (31%), Positives = 144/305 (47%), Gaps = 17/305 (5%) |
NCBI |
Show Blast
|
| ACU20424.1 |
unknown [Glycine max]
Evalue: 3e-30 | Bitscore: 136
Identities = 97/306 (31%), Positives = 145/306 (47%), Gaps = 19/306 (6%) |
NCBI |
Show Blast
|
| XP_002314038.1 |
actin related protein [Populus trichocarpa]
Evalue: 6e-30 | Bitscore: 135
Identities = 94/305 (30%), Positives = 146/305 (47%), Gaps = 17/305 (5%) |
NCBI |
Show Blast
|
| XP_002298428.1 |
actin related protein [Populus trichocarpa]
Evalue: 7e-30 | Bitscore: 135
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 17/305 (5%) |
NCBI |
Show Blast
|
| NP_567105.1 |
ATARP7 (ACTIN-RELATED PROTEIN 7); structural constituent of cytoskeleton [Arabidopsis thaliana]
Evalue: 2e-29 | Bitscore: 134
Identities = 89/305 (29%), Positives = 145/305 (47%), Gaps = 18/305 (5%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAB74616.1 |
unknown [environmental sequence]
Evalue: 5e-08 | Bitscore: 58
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 16/136 (11%) |
GOS |
Show Blast
|
| EAK11583.1 |
unknown [environmental sequence]
Evalue: 4e-07 | Bitscore: 55
Identities = 58/261 (22%), Positives = 100/261 (38%), Gaps = 18/261 (6%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL53534.1 |
actin-like protein (ISS) [Ostreococcus tauri]
Evalue: 3e-169 | Bitscore: 598
Identities = 342/342 (100%), Positives = 342/342 (100%), Gaps = 0/342 (0%) |
NCBI |
Show Blast
|
| XP_001418472.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 2e-105 | Bitscore: 386
Identities = 218/348 (62%), Positives = 252/348 (72%), Gaps = 7/348 (2%) |
NCBI |
Show Blast
|
| XP_001752236.1 |
actin-related protein ARP7 [Physcomitrella patens subsp. patens]
Evalue: 1e-33 | Bitscore: 147
Identities = 93/306 (30%), Positives = 155/306 (50%), Gaps = 17/306 (5%) |
NCBI |
Show Blast
|
| XP_001778293.1 |
actin-related protein ARP7 [Physcomitrella patens subsp. patens]
Evalue: 2e-32 | Bitscore: 143
Identities = 91/306 (29%), Positives = 151/306 (49%), Gaps = 17/306 (5%) |
NCBI |
Show Blast
|
| XP_002499766.1 |
actin superfamily [Micromonas sp. RCC299]
Evalue: 6e-32 | Bitscore: 142
Identities = 128/346 (36%), Positives = 175/346 (50%), Gaps = 15/346 (4%) |
NCBI |
Show Blast
|
| XP_002278255.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 2e-31 | Bitscore: 140
Identities = 96/305 (31%), Positives = 144/305 (47%), Gaps = 17/305 (5%) |
NCBI |
Show Blast
|
| ACU20424.1 |
unknown [Glycine max]
Evalue: 3e-30 | Bitscore: 136
Identities = 97/306 (31%), Positives = 145/306 (47%), Gaps = 19/306 (6%) |
NCBI |
Show Blast
|
| XP_002314038.1 |
actin related protein [Populus trichocarpa]
Evalue: 6e-30 | Bitscore: 135
Identities = 94/305 (30%), Positives = 146/305 (47%), Gaps = 17/305 (5%) |
NCBI |
Show Blast
|
| XP_002298428.1 |
actin related protein [Populus trichocarpa]
Evalue: 7e-30 | Bitscore: 135
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 17/305 (5%) |
NCBI |
Show Blast
|
| NP_567105.1 |
ATARP7 (ACTIN-RELATED PROTEIN 7); structural constituent of cytoskeleton [Arabidopsis thaliana]
Evalue: 2e-29 | Bitscore: 134
Identities = 89/305 (29%), Positives = 145/305 (47%), Gaps = 18/305 (5%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot16g00370 |
chrom16.0001 [46940..47431,47596..48594] inframe stop codon
Evalue: 3e-08 | Bitscore: 54
Identities = 58/263 (22%), Positives = 104/263 (39%), Gaps = 22/263 (8%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| A2XMK6 |
Actin-related protein 7 OS=Oryza sativa subsp. indica GN=ARP7 PE=2 SV=2
Evalue: 1e-29 | Bitscore: 130
Identities = 89/306 (29%), Positives = 134/306 (43%), Gaps = 23/306 (7%) |
SwissP |
Show Blast
|
| A3ANB5 |
Actin-related protein 7 OS=Oryza sativa subsp. japonica GN=ARP7 PE=2 SV=2
Evalue: 1e-29 | Bitscore: 130
Identities = 89/306 (29%), Positives = 134/306 (43%), Gaps = 23/306 (7%) |
SwissP |
Show Blast
|
| Q8L4Y5 |
Actin-related protein 7 OS=Arabidopsis thaliana GN=ARP7 PE=1 SV=1
Evalue: 2e-29 | Bitscore: 130
Identities = 83/305 (27%), Positives = 132/305 (43%), Gaps = 18/305 (5%) |
SwissP |
Show Blast
|
| P07829 |
Actin-3 OS=Dictyostelium discoideum GN=act3 PE=3 SV=3
Evalue: 5e-11 | Bitscore: 68
Identities = 59/260 (22%), Positives = 107/260 (41%), Gaps = 16/260 (6%) |
SwissP |
Show Blast
|
| Q54GX7 |
Actin-10 OS=Dictyostelium discoideum GN=act10 PE=1 SV=1
Evalue: 1e-10 | Bitscore: 67
Identities = 63/261 (24%), Positives = 106/261 (40%), Gaps = 18/261 (6%) |
SwissP |
Show Blast
|
| P07830 |
Major actin OS=Dictyostelium discoideum GN=act1 PE=1 SV=2
Evalue: 1e-10 | Bitscore: 67
Identities = 63/261 (24%), Positives = 106/261 (40%), Gaps = 18/261 (6%) |
SwissP |
Show Blast
|
| Q8SWN8 |
Actin OS=Encephalitozoon cuniculi GN=ECU01_0460 PE=1 SV=2
Evalue: 2e-10 | Bitscore: 67
Identities = 57/260 (21%), Positives = 100/260 (38%), Gaps = 16/260 (6%) |
SwissP |
Show Blast
|
| Q553U6 |
Putative actin-22 OS=Dictyostelium discoideum GN=act22 PE=3 SV=1
Evalue: 2e-10 | Bitscore: 67
Identities = 64/261 (24%), Positives = 104/261 (39%), Gaps = 18/261 (6%) |
SwissP |
Show Blast
|
| P02576 |
Actin, plasmodial isoform OS=Physarum polycephalum GN=ARDA PE=1 SV=2
Evalue: 2e-10 | Bitscore: 67
Identities = 60/260 (23%), Positives = 103/260 (39%), Gaps = 16/260 (6%) |
SwissP |
Show Blast
|
| O00937 |
Actin OS=Histriculus cavicola PE=3 SV=2
Evalue: 3e-10 | Bitscore: 66
Identities = 56/259 (21%), Positives = 102/259 (39%), Gaps = 19/259 (7%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT3G60830.1 |
| Symbols: ARP7, ATARP7 | ATARP7 (ACTIN-RELATED PROTEIN 7); structural constituent of cytoskeleton |
Evalue: 2e-30 | Bitscore: 130
Identities = 83/305 (27%), Positives = 132/305 (43%), Gaps = 18/305 (5%) |
Tair |
Show Blast
|
| AT5G09810.1 |
| Symbols: ACT2/7, ACT7 | ACT7 (actin 7) | chr5:3052810-3054221 FORWARD
Evalue: 2e-10 | Bitscore: 63
Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 16/260 (6%) |
Tair |
Show Blast
|
| AT3G18780.2 |
| Symbols: DER1, LSR2, ENL2, ACT2 | ACT2 (ACTIN 2); structural constituent of cytoskeleton | chr3:6475541-6476838
Evalue: 3e-10 | Bitscore: 63
Identities = 57/260 (21%), Positives = 102/260 (39%), Gaps = 16/260 (6%) |
Tair |
Show Blast
|
| AT1G49240.1 |
| Symbols: ACT8 | ACT8 (ACTIN 8); structural constituent of cytoskeleton | chr1:18220207-18221615 FORWARD
Evalue: 3e-10 | Bitscore: 63
Identities = 57/260 (21%), Positives = 102/260 (39%), Gaps = 16/260 (6%) |
Tair |
Show Blast
|
| AT3G12110.1 |
| Symbols: ACT11 | ACT11 (ACTIN-11); structural constituent of cytoskeleton | chr3:3858122-3859615 FORWARD
Evalue: 1e-09 | Bitscore: 60
Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 16/260 (6%) |
Tair |
Show Blast
|
| AT3G46520.1 |
| Symbols: ACT12 | ACT12 (ACTIN-12); structural constituent of cytoskeleton | chr3:17139552-17140966 FORWARD
Evalue: 2e-09 | Bitscore: 60
Identities = 57/260 (21%), Positives = 100/260 (38%), Gaps = 16/260 (6%) |
Tair |
Show Blast
|
| AT2G37620.2 |
| Symbols: AAC1, ACT1 | ACT1 (ACTIN 1); structural constituent of cytoskeleton | chr2:15786839-15788319 FORWARD
Evalue: 2e-09 | Bitscore: 60
Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 16/260 (6%) |
Tair |
Show Blast
|
| AT3G53750.1 |
| Symbols: ACT3 | ACT3 (ACTIN 3); structural constituent of cytoskeleton | chr3:19926902-19928349 FORWARD
Evalue: 2e-09 | Bitscore: 60
Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 16/260 (6%) |
Tair |
Show Blast
|
| AT2G37620.1 |
| Symbols: AAC1, ACT1 | ACT1 (ACTIN 1); structural constituent of cytoskeleton | chr2:15786839-15788319 FORWARD
Evalue: 2e-09 | Bitscore: 60
Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 16/260 (6%) |
Tair |
Show Blast
|
| AT5G59370.2 |
| Symbols: ACT4 | ACT4 (ACTIN 4) | chr5:23967335-23968812 FORWARD
Evalue: 4e-09 | Bitscore: 58
Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 16/260 (6%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
