- Gene ID
- Ot06g01520
- Locus
- Ot06g01520
- Functional Description
- putative tocopherol polyprenyltransferase (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom06
- Last Modified On
- 09 March 2010 3h14
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- putative tocopherol polyprenyltransferase (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
1.
integral component of membrane
- Molecular Function
-
1.
prenyltransferase activity
- Biological Process
-
n/a
Protein Domains
| Domain ID | Description | Database |
|---|
|
PTHR11048 |
PRENYLTRANSFERASES |
HMMPanther |
|
IPR000537 |
UbiA prenyltransferase |
InterPro |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL53411.1 |
putative tocopherol polyprenyltransferase (ISS) [Ostreococcus tauri]
Evalue: 3e-156 | Bitscore: 555
Identities = 390/390 (100%), Positives = 390/390 (100%), Gaps = 0/390 (0%) |
NCBI |
Show Blast
|
| XP_001418412.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 5e-128 | Bitscore: 461
Identities = 260/293 (88%), Positives = 276/293 (94%), Gaps = 0/293 (0%) |
NCBI |
Show Blast
|
| EEH56619.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 3e-92 | Bitscore: 343
Identities = 208/293 (70%), Positives = 237/293 (80%), Gaps = 5/293 (1%) |
NCBI |
Show Blast
|
| XP_001695341.1 |
homogentisate solanesyltransferase [Chlamydomonas reinhardtii]
Evalue: 1e-84 | Bitscore: 318
Identities = 196/292 (67%), Positives = 231/292 (79%), Gaps = 0/292 (0%) |
NCBI |
Show Blast
|
| NP_001078138.1 |
homogentisate farnesyltransferase/ homogentisate geranylgeranyltransferase/ homogentisate solanesyltransferase [Arabidopsis
Evalue: 1e-84 | Bitscore: 317
Identities = 180/292 (61%), Positives = 223/292 (76%), Gaps = 0/292 (0%) |
NCBI |
Show Blast
|
| CAL01105.1 |
homogentisate prenyltransferase [Chlamydomonas reinhardtii]
Evalue: 1e-84 | Bitscore: 317
Identities = 196/292 (67%), Positives = 231/292 (79%), Gaps = 0/292 (0%) |
NCBI |
Show Blast
|
| NP_001154609.1 |
homogentisate farnesyltransferase/ homogentisate geranylgeranyltransferase/ homogentisate solanesyltransferase [Arabidopsis
Evalue: 2e-84 | Bitscore: 317
Identities = 180/292 (61%), Positives = 223/292 (76%), Gaps = 0/292 (0%) |
NCBI |
Show Blast
|
| EEE67463.1 |
hypothetical protein OsJ_24854 [Oryza sativa Japonica Group]
Evalue: 5e-84 | Bitscore: 315
Identities = 187/324 (57%), Positives = 236/324 (72%), Gaps = 0/324 (0%) |
NCBI |
Show Blast
|
| EEC82316.1 |
hypothetical protein OsI_26593 [Oryza sativa Indica Group]
Evalue: 6e-84 | Bitscore: 315
Identities = 187/324 (57%), Positives = 236/324 (72%), Gaps = 0/324 (0%) |
NCBI |
Show Blast
|
| XP_002501436.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 7e-84 | Bitscore: 315
Identities = 183/293 (62%), Positives = 225/293 (76%), Gaps = 0/293 (0%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAJ99575.1 |
unknown [environmental sequence]
Evalue: 2e-59 | Bitscore: 229
Identities = 121/145 (83%), Positives = 123/145 (84%) |
GOS |
Show Blast
|
| EAD60479.1 |
unknown [environmental sequence]
Evalue: 5e-22 | Bitscore: 105
Identities = 50/66 (75%), Positives = 56/66 (84%) |
GOS |
Show Blast
|
| EAF64308.1 |
unknown [environmental sequence]
Evalue: 3e-15 | Bitscore: 82
Identities = 46/101 (45%), Positives = 59/101 (58%), Gaps = 6/101 (5%) |
GOS |
Show Blast
|
| EAK72560.1 |
unknown [environmental sequence]
Evalue: 1e-06 | Bitscore: 53
Identities = 48/184 (26%), Positives = 74/184 (40%), Gaps = 29/184 (15%) |
GOS |
Show Blast
|
| EAD91656.1 |
unknown [environmental sequence]
Evalue: 2e-06 | Bitscore: 53
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 6/85 (7%) |
GOS |
Show Blast
|
| EAK74604.1 |
unknown [environmental sequence]
Evalue: 3e-06 | Bitscore: 52
Identities = 49/194 (25%), Positives = 76/194 (39%), Gaps = 29/194 (14%) |
GOS |
Show Blast
|
| EAH84081.1 |
unknown [environmental sequence]
Evalue: 4e-06 | Bitscore: 52
Identities = 47/184 (25%), Positives = 74/184 (40%), Gaps = 29/184 (15%) |
GOS |
Show Blast
|
| EAI88002.1 |
unknown [environmental sequence]
Evalue: 0.0002 | Bitscore: 46
Identities = 46/185 (24%), Positives = 72/185 (38%), Gaps = 31/185 (16%) |
GOS |
Show Blast
|
| EAB90295.1 |
unknown [environmental sequence]
Evalue: 0.0002 | Bitscore: 46
Identities = 47/185 (25%), Positives = 72/185 (38%), Gaps = 31/185 (16%) |
GOS |
Show Blast
|
| EAG11118.1 |
unknown [environmental sequence]
Evalue: 0.0003 | Bitscore: 46
Identities = 43/184 (23%), Positives = 72/184 (39%), Gaps = 29/184 (15%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL53411.1 |
putative tocopherol polyprenyltransferase (ISS) [Ostreococcus tauri]
Evalue: 3e-156 | Bitscore: 555
Identities = 390/390 (100%), Positives = 390/390 (100%), Gaps = 0/390 (0%) |
NCBI |
Show Blast
|
| XP_001418412.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 5e-128 | Bitscore: 461
Identities = 260/293 (88%), Positives = 276/293 (94%), Gaps = 0/293 (0%) |
NCBI |
Show Blast
|
| EEH56619.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 3e-92 | Bitscore: 343
Identities = 208/293 (70%), Positives = 237/293 (80%), Gaps = 5/293 (1%) |
NCBI |
Show Blast
|
| XP_001695341.1 |
homogentisate solanesyltransferase [Chlamydomonas reinhardtii]
Evalue: 1e-84 | Bitscore: 318
Identities = 196/292 (67%), Positives = 231/292 (79%), Gaps = 0/292 (0%) |
NCBI |
Show Blast
|
| NP_001078138.1 |
homogentisate farnesyltransferase/ homogentisate geranylgeranyltransferase/ homogentisate solanesyltransferase [Arabidopsis
Evalue: 1e-84 | Bitscore: 317
Identities = 180/292 (61%), Positives = 223/292 (76%), Gaps = 0/292 (0%) |
NCBI |
Show Blast
|
| CAL01105.1 |
homogentisate prenyltransferase [Chlamydomonas reinhardtii]
Evalue: 1e-84 | Bitscore: 317
Identities = 196/292 (67%), Positives = 231/292 (79%), Gaps = 0/292 (0%) |
NCBI |
Show Blast
|
| NP_001154609.1 |
homogentisate farnesyltransferase/ homogentisate geranylgeranyltransferase/ homogentisate solanesyltransferase [Arabidopsis
Evalue: 2e-84 | Bitscore: 317
Identities = 180/292 (61%), Positives = 223/292 (76%), Gaps = 0/292 (0%) |
NCBI |
Show Blast
|
| EEE67463.1 |
hypothetical protein OsJ_24854 [Oryza sativa Japonica Group]
Evalue: 5e-84 | Bitscore: 315
Identities = 187/324 (57%), Positives = 236/324 (72%), Gaps = 0/324 (0%) |
NCBI |
Show Blast
|
| EEC82316.1 |
hypothetical protein OsI_26593 [Oryza sativa Indica Group]
Evalue: 6e-84 | Bitscore: 315
Identities = 187/324 (57%), Positives = 236/324 (72%), Gaps = 0/324 (0%) |
NCBI |
Show Blast
|
| XP_002501436.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 7e-84 | Bitscore: 315
Identities = 183/293 (62%), Positives = 225/293 (76%), Gaps = 0/293 (0%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot07g03410 |
chrom07.0001 [547770..548261,548299..548745]
Evalue: 1e-19 | Bitscore: 92
Identities = 77/244 (31%), Positives = 112/244 (45%), Gaps = 17/244 (6%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q5W6H5 |
Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLG PE=2 SV=1
Evalue: 1e-05 | Bitscore: 51
Identities = 53/197 (26%), Positives = 77/197 (39%), Gaps = 35/197 (17%) |
SwissP |
Show Blast
|
| Q9M3W5 |
Chlorophyll synthase, chloroplastic OS=Avena sativa GN=CHLG PE=1 SV=1
Evalue: 3e-05 | Bitscore: 50
Identities = 49/184 (26%), Positives = 72/184 (39%), Gaps = 29/184 (15%) |
SwissP |
Show Blast
|
| Q38833 |
Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana GN=CHLG PE=2 SV=1
Evalue: 0.0001 | Bitscore: 48
Identities = 45/184 (24%), Positives = 67/184 (36%), Gaps = 29/184 (15%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT3G11945.1 |
| Symbols: ATHST | ATHST; prenyltransferase | chr3:3780047-3782886 REVERSE
Evalue: 2e-84 | Bitscore: 309
Identities = 157/292 (53%), Positives = 197/292 (67%) |
Tair |
Show Blast
|
| AT2G18950.1 |
| Symbols: TPT1, ATHPT, HPT, VTE2, HPT1 | HPT1 (HOMOGENTISATE PHYTYLTRANSFERASE 1); prenyltransferase |
Evalue: 9e-32 | Bitscore: 134
Identities = 104/302 (34%), Positives = 146/302 (48%), Gaps = 20/302 (6%) |
Tair |
Show Blast
|
| AT3G51820.1 |
| Symbols: ATG4, G4, CHLG | ATG4/CHLG/G4 (CHLOROPHYLL SYNTHASE); chlorophyll synthetase | chr3:19227278-19229911 REVERSE
Evalue: 1e-05 | Bitscore: 48
Identities = 45/184 (24%), Positives = 67/184 (36%), Gaps = 29/184 (15%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
