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Ostreococcus tauri


Gene ID
Ot06g01180
Locus
Ot06g01180
Functional Description
unnamed product
Gene Type
protein-coding gene
Contig
chrom06
Last Modified On
09 March 2010 3h08
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
unnamed product
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

n/a
 

Protein Domains 

n/a
 

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
CAL53377.1 unnamed protein product [Ostreococcus tauri]
Evalue: 3e-95 | Bitscore: 350
Identities = 174/174 (100%), Positives = 174/174 (100%), Gaps = 0/174 (0%)		 NCBI
Show Blast
XP_001418170.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 9e-66 | Bitscore: 252
Identities = 123/168 (73%), Positives = 141/168 (83%), Gaps = 1/168 (0%)		 NCBI
Show Blast
EEH56607.1 predicted protein [Micromonas pusilla CCMP1545]
Evalue: 5e-37 | Bitscore: 157
Identities = 88/175 (50%), Positives = 108/175 (61%), Gaps = 11/175 (6%)		 NCBI
Show Blast
XP_002501452.1 predicted protein [Micromonas sp. RCC299]
Evalue: 2e-35 | Bitscore: 151
Identities = 84/172 (48%), Positives = 108/172 (62%), Gaps = 10/172 (5%)		 NCBI
Show Blast
XP_001698036.1 hypothetical protein CHLREDRAFT_193005 [Chlamydomonas reinhardtii]
Evalue: 1e-07 | Bitscore: 59
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 16/149 (10%)		 NCBI
Show Blast
XP_001072526.1 PREDICTED: similar to SRY-box containing gene 30 [Rattus norvegicus]
Evalue: 0.17 | Bitscore: 39
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 8/73 (10%)		 NCBI
Show Blast
XP_001485041.1 hypothetical protein PGUG_02770 [Pichia guilliermondii ATCC 6260]
Evalue: 0.26 | Bitscore: 38
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 11/85 (12%)		 NCBI
Show Blast
A5DHL9 RecName: Full=Eukaryotic translation initiation factor 3 subunit A; Short=eIF3a; AltName: Full=Eukaryotic translation initiation
Evalue: 0.26 | Bitscore: 38
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 11/85 (12%)		 NCBI
Show Blast
NP_775560.1 transcription factor SOX-30 [Mus musculus] sp|Q8CGW4.1|SOX30_MOUSE RecName: Full=Transcription factor SOX-30
Evalue: 0.28 | Bitscore: 38
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 8/73 (10%)		 NCBI
Show Blast
EDL33828.1 SRY-box containing gene 30 [Mus musculus]
Evalue: 0.28 | Bitscore: 38
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 8/73 (10%)		 NCBI
Show Blast

Gene Structure 

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Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
+
Structure Quality
2

CDS  

Locus ID
OT06G01180
Redo Blast
CDS Length
525 nucleotides
CDS Sequence

Protein 

Locus ID
OT06G01180
Redo Blast
Protein Length
175 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a