- Gene ID
- Ot06g00230
- Locus
- Ot06g00230
- Functional Description
- alpha 2 subunit of 20S proteasome [Oryza sativa (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom06
- Last Modified On
- 09 March 2010 2h55
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- alpha 2 subunit of 20S proteasome [Oryza sativa (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
1.
proteasome core complex
- Molecular Function
-
1.
threonine-type endopeptidase activity
- Biological Process
-
1.
ubiquitin-dependent protein catabolic process
2.
proteolysis involved in cellular protein catabolic process
Protein Domains
| Domain ID | Description | Database |
|---|
|
G3DSA:3.60.20.10 |
no description |
Gene3D |
|
IPR000426 |
Proteasome, alpha-subunit, conserved site |
InterPro |
|
IPR001353 |
Proteasome, subunit alpha/beta |
InterPro |
|
PTHR11599 |
PROTEASOME SUBUNIT ALPHA/BETA |
HMMPanther |
|
SSF56235 |
N-terminal nucleophile aminohydrolases (Ntn hydrolases) |
superfamily |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL53282.1 |
alpha 2 subunit of 20S proteasome (ISS) [Ostreococcus tauri]
Evalue: 1e-145 | Bitscore: 519
Identities = 270/270 (100%), Positives = 270/270 (100%), Gaps = 0/270 (0%) |
NCBI |
Show Blast
|
| XP_001418135.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 9e-125 | Bitscore: 450
Identities = 217/235 (92%), Positives = 227/235 (96%), Gaps = 0/235 (0%) |
NCBI |
Show Blast
|
| EEH56498.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 3e-113 | Bitscore: 411
Identities = 193/235 (82%), Positives = 216/235 (91%), Gaps = 0/235 (0%) |
NCBI |
Show Blast
|
| XP_002500784.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 1e-110 | Bitscore: 402
Identities = 188/235 (80%), Positives = 216/235 (91%), Gaps = 0/235 (0%) |
NCBI |
Show Blast
|
| NP_001050259.1 |
Os03g0387100 [Oryza sativa (japonica cultivar-group)] sp|Q10KF0.1|PSA2_ORYSJ RecName: Full=Proteasome subunit alpha type-2; AltName: Full=20S
Evalue: 6e-104 | Bitscore: 380
Identities = 175/235 (74%), Positives = 212/235 (90%), Gaps = 0/235 (0%) |
NCBI |
Show Blast
|
| ACG33652.1 |
proteasome subunit alpha type 2 [Zea mays]
Evalue: 6e-104 | Bitscore: 380
Identities = 176/235 (74%), Positives = 210/235 (89%), Gaps = 0/235 (0%) |
NCBI |
Show Blast
|
| XP_002513374.1 |
proteasome subunit alpha type, putative [Ricinus communis]
Evalue: 8e-104 | Bitscore: 380
Identities = 176/235 (74%), Positives = 208/235 (88%), Gaps = 0/235 (0%) |
NCBI |
Show Blast
|
| XP_001701305.1 |
20S proteasome alpha subunit B [Chlamydomonas reinhardtii]
Evalue: 1e-103 | Bitscore: 380
Identities = 173/235 (73%), Positives = 208/235 (88%), Gaps = 0/235 (0%) |
NCBI |
Show Blast
|
| NP_001132248.1 |
hypothetical protein LOC100193683 [Zea mays]
Evalue: 1e-103 | Bitscore: 379
Identities = 175/235 (74%), Positives = 210/235 (89%), Gaps = 0/235 (0%) |
NCBI |
Show Blast
|
| NP_001047516.1 |
Os02g0634900 [Oryza sativa (japonica cultivar-group)]
Evalue: 2e-103 | Bitscore: 379
Identities = 173/235 (73%), Positives = 212/235 (90%), Gaps = 0/235 (0%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAD84458.1 |
unknown [environmental sequence]
Evalue: 1e-90 | Bitscore: 332
Identities = 168/207 (81%), Positives = 191/207 (92%) |
GOS |
Show Blast
|
| EAB85670.1 |
unknown [environmental sequence]
Evalue: 1e-74 | Bitscore: 278
Identities = 131/186 (70%), Positives = 159/186 (85%) |
GOS |
Show Blast
|
| EAD89001.1 |
unknown [environmental sequence]
Evalue: 2e-38 | Bitscore: 158
Identities = 83/230 (36%), Positives = 128/230 (55%) |
GOS |
Show Blast
|
| EAI79624.1 |
unknown [environmental sequence]
Evalue: 6e-36 | Bitscore: 150
Identities = 77/208 (37%), Positives = 123/208 (59%) |
GOS |
Show Blast
|
| EAD44366.1 |
unknown [environmental sequence]
Evalue: 2e-30 | Bitscore: 132
Identities = 76/200 (38%), Positives = 119/200 (59%), Gaps = 4/200 (2%) |
GOS |
Show Blast
|
| EAK40981.1 |
unknown [environmental sequence]
Evalue: 2e-29 | Bitscore: 129
Identities = 79/226 (34%), Positives = 123/226 (54%), Gaps = 2/226 (0%) |
GOS |
Show Blast
|
| EAI84421.1 |
unknown [environmental sequence]
Evalue: 3e-29 | Bitscore: 128
Identities = 77/233 (33%), Positives = 129/233 (55%), Gaps = 2/233 (0%) |
GOS |
Show Blast
|
| EAI99257.1 |
unknown [environmental sequence]
Evalue: 1e-26 | Bitscore: 119
Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 1/202 (0%) |
GOS |
Show Blast
|
| EAE92748.1 |
unknown [environmental sequence]
Evalue: 2e-24 | Bitscore: 112
Identities = 64/162 (39%), Positives = 100/162 (61%), Gaps = 1/162 (0%) |
GOS |
Show Blast
|
| EAJ44238.1 |
unknown [environmental sequence]
Evalue: 5e-24 | Bitscore: 110
Identities = 60/158 (37%), Positives = 94/158 (59%), Gaps = 1/158 (0%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL53282.1 |
alpha 2 subunit of 20S proteasome (ISS) [Ostreococcus tauri]
Evalue: 1e-145 | Bitscore: 519
Identities = 270/270 (100%), Positives = 270/270 (100%), Gaps = 0/270 (0%) |
NCBI |
Show Blast
|
| XP_001418135.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 9e-125 | Bitscore: 450
Identities = 217/235 (92%), Positives = 227/235 (96%), Gaps = 0/235 (0%) |
NCBI |
Show Blast
|
| EEH56498.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 3e-113 | Bitscore: 411
Identities = 193/235 (82%), Positives = 216/235 (91%), Gaps = 0/235 (0%) |
NCBI |
Show Blast
|
| XP_002500784.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 1e-110 | Bitscore: 402
Identities = 188/235 (80%), Positives = 216/235 (91%), Gaps = 0/235 (0%) |
NCBI |
Show Blast
|
| NP_001050259.1 |
Os03g0387100 [Oryza sativa (japonica cultivar-group)] sp|Q10KF0.1|PSA2_ORYSJ RecName: Full=Proteasome subunit alpha type-2; AltName: Full=20S
Evalue: 6e-104 | Bitscore: 380
Identities = 175/235 (74%), Positives = 212/235 (90%), Gaps = 0/235 (0%) |
NCBI |
Show Blast
|
| ACG33652.1 |
proteasome subunit alpha type 2 [Zea mays]
Evalue: 6e-104 | Bitscore: 380
Identities = 176/235 (74%), Positives = 210/235 (89%), Gaps = 0/235 (0%) |
NCBI |
Show Blast
|
| XP_002513374.1 |
proteasome subunit alpha type, putative [Ricinus communis]
Evalue: 8e-104 | Bitscore: 380
Identities = 176/235 (74%), Positives = 208/235 (88%), Gaps = 0/235 (0%) |
NCBI |
Show Blast
|
| XP_001701305.1 |
20S proteasome alpha subunit B [Chlamydomonas reinhardtii]
Evalue: 1e-103 | Bitscore: 380
Identities = 173/235 (73%), Positives = 208/235 (88%), Gaps = 0/235 (0%) |
NCBI |
Show Blast
|
| NP_001132248.1 |
hypothetical protein LOC100193683 [Zea mays]
Evalue: 1e-103 | Bitscore: 379
Identities = 175/235 (74%), Positives = 210/235 (89%), Gaps = 0/235 (0%) |
NCBI |
Show Blast
|
| NP_001047516.1 |
Os02g0634900 [Oryza sativa (japonica cultivar-group)]
Evalue: 2e-103 | Bitscore: 379
Identities = 173/235 (73%), Positives = 212/235 (90%), Gaps = 0/235 (0%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot01g04880 |
chrom01.0001 [794474..796247,796318..796321,796368..797005, 797389..798741,799005..799141,799241..799962,
Evalue: 2e-33 | Bitscore: 137
Identities = 80/231 (34%), Positives = 126/231 (54%), Gaps = 26/231 (11%) |
Self |
Show Blast
|
| Ot10g01180 |
chrom10.0001 [189990..190030,190065..190704]
Evalue: 2e-28 | Bitscore: 120
Identities = 74/210 (35%), Positives = 115/210 (54%), Gaps = 4/210 (1%) |
Self |
Show Blast
|
| Ot02g00180 |
chrom02.0001 [23031..23041,23097..23166,23200..23310,23343..23452,
Evalue: 9e-27 | Bitscore: 115
Identities = 77/220 (35%), Positives = 120/220 (54%), Gaps = 17/220 (7%) |
Self |
Show Blast
|
| Ot10g03220 |
chrom10.0001 [502775..503498,503552..503613] incomplete
Evalue: 8e-25 | Bitscore: 108
Identities = 69/203 (33%), Positives = 99/203 (48%), Gaps = 1/203 (0%) |
Self |
Show Blast
|
| Ot06g00420 |
chrom06.0001 [57639..57672,57797..58284]
Evalue: 2e-16 | Bitscore: 81
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 4/157 (2%) |
Self |
Show Blast
|
| Ot15g00420 |
chrom15.0001 [65872..65948,66072..66132,66281..67027]
Evalue: 0.0001 | Bitscore: 42
Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 5/157 (3%) |
Self |
Show Blast
|
| Ot02g04420 |
chrom02.0001 [477008..477251,477300..477811] inframe stop codon incomplete
Evalue: 0.0002 | Bitscore: 41
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 9/207 (4%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| A2YVR7 |
Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica GN=PAB1 PE=2 SV=2
Evalue: 5e-97 | Bitscore: 353
Identities = 175/235 (74%), Positives = 212/235 (90%) |
SwissP |
Show Blast
|
| Q10KF0 |
Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1
Evalue: 5e-97 | Bitscore: 353
Identities = 175/235 (74%), Positives = 212/235 (90%) |
SwissP |
Show Blast
|
| O23708 |
Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1 PE=1 SV=1
Evalue: 2e-94 | Bitscore: 345
Identities = 173/235 (73%), Positives = 206/235 (87%) |
SwissP |
Show Blast
|
| Q8L4A7 |
Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1
Evalue: 2e-93 | Bitscore: 342
Identities = 172/235 (73%), Positives = 204/235 (86%) |
SwissP |
Show Blast
|
| Q54DM7 |
Proteasome subunit alpha type-2 OS=Dictyostelium discoideum GN=psmA2 PE=3 SV=1
Evalue: 8e-84 | Bitscore: 310
Identities = 152/229 (66%), Positives = 198/229 (86%), Gaps = 1/229 (0%) |
SwissP |
Show Blast
|
| P40301 |
Proteasome subunit alpha type-2 OS=Drosophila melanogaster GN=Pros25 PE=2 SV=1
Evalue: 7e-80 | Bitscore: 296
Identities = 147/234 (62%), Positives = 186/234 (79%), Gaps = 1/234 (0%) |
SwissP |
Show Blast
|
| P25787 |
Proteasome subunit alpha type-2 OS=Homo sapiens GN=PSMA2 PE=1 SV=2
Evalue: 1e-79 | Bitscore: 296
Identities = 147/234 (62%), Positives = 185/234 (79%), Gaps = 1/234 (0%) |
SwissP |
Show Blast
|
| P17220 |
Proteasome subunit alpha type-2 OS=Rattus norvegicus GN=Psma2 PE=1 SV=3
Evalue: 1e-79 | Bitscore: 296
Identities = 147/234 (62%), Positives = 185/234 (79%), Gaps = 1/234 (0%) |
SwissP |
Show Blast
|
| Q3T0Y5 |
Proteasome subunit alpha type-2 OS=Bos taurus GN=PSMA2 PE=1 SV=3
Evalue: 1e-79 | Bitscore: 296
Identities = 147/234 (62%), Positives = 185/234 (79%), Gaps = 1/234 (0%) |
SwissP |
Show Blast
|
| P49722 |
Proteasome subunit alpha type-2 OS=Mus musculus GN=Psma2 PE=1 SV=2
Evalue: 2e-79 | Bitscore: 295
Identities = 147/234 (62%), Positives = 184/234 (78%), Gaps = 1/234 (0%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT1G16470.2 |
| Symbols: PAB1 | PAB1 (PROTEASOME SUBUNIT PAB1); peptidase | chr1:5623116-5625433 FORWARD
Evalue: 1e-95 | Bitscore: 345
Identities = 173/235 (73%), Positives = 206/235 (87%) |
Tair |
Show Blast
|
| AT1G16470.1 |
| Symbols: PAB1 | PAB1 (PROTEASOME SUBUNIT PAB1); peptidase | chr1:5623116-5625433 FORWARD
Evalue: 1e-95 | Bitscore: 345
Identities = 173/235 (73%), Positives = 206/235 (87%) |
Tair |
Show Blast
|
| AT1G79210.2 |
| Symbols: | 20S proteasome alpha subunit B, putative | chr1:29801179-29803133 REVERSE
Evalue: 2e-94 | Bitscore: 342
Identities = 172/235 (73%), Positives = 204/235 (86%) |
Tair |
Show Blast
|
| AT1G79210.3 |
| Symbols: | 20S proteasome alpha subunit B, putative | chr1:29801179-29803133 REVERSE
Evalue: 2e-94 | Bitscore: 342
Identities = 172/235 (73%), Positives = 204/235 (86%) |
Tair |
Show Blast
|
| AT1G79210.1 |
| Symbols: | 20S proteasome alpha subunit B, putative | chr1:29801179-29803133 REVERSE
Evalue: 2e-94 | Bitscore: 342
Identities = 172/235 (73%), Positives = 204/235 (86%) |
Tair |
Show Blast
|
| AT1G53850.2 |
| Symbols: PAE1 | PAE1 (20S proteasome alpha subunit E1) | chr1:20107799-20109460 REVERSE
Evalue: 2e-37 | Bitscore: 152
Identities = 84/217 (38%), Positives = 136/217 (62%), Gaps = 3/217 (1%) |
Tair |
Show Blast
|
| AT1G53850.1 |
| Symbols: PAE1 | PAE1 (20S proteasome alpha subunit E1); peptidase | chr1:20107799-20109460 REVERSE
Evalue: 2e-37 | Bitscore: 152
Identities = 84/217 (38%), Positives = 136/217 (62%), Gaps = 3/217 (1%) |
Tair |
Show Blast
|
| AT3G14290.1 |
| Symbols: PAE2 | PAE2 (20S proteasome alpha subunit E2); peptidase | chr3:4764371-4766388 FORWARD
Evalue: 2e-37 | Bitscore: 152
Identities = 85/217 (39%), Positives = 136/217 (62%), Gaps = 3/217 (1%) |
Tair |
Show Blast
|
| AT5G66140.1 |
| Symbols: PAD2 | PAD2 (20S proteasome alpha subunit D2); peptidase | chr5:26454671-26455903 REVERSE
Evalue: 5e-37 | Bitscore: 151
Identities = 89/227 (39%), Positives = 134/227 (59%), Gaps = 6/227 (2%) |
Tair |
Show Blast
|
| AT3G51260.1 |
| Symbols: PAD1 | PAD1 (20S PROTEASOME ALPHA SUBUNIT PAD1); peptidase | chr3:19042065-19043725 FORWARD
Evalue: 1e-36 | Bitscore: 149
Identities = 85/226 (37%), Positives = 129/226 (57%), Gaps = 19/226 (8%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
