- Gene ID
- Ot05g03710
- Locus
- Ot05g03710
- Functional Description
- Membrin, Qb-SNARE protein
- Gene Type
- protein-coding gene
- Contig
- chrom05
- Last Modified On
- 24 October 2011 15h48
- History
-
Annotator
- Name
- Pierre Rouzé
- Email
- pierre.rouze@psb.ugent.be
- Lab
- VIB U.Gent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- MEMB1
- Alternative Names
- n/a
- Definition
- Membrin, Qb-SNARE protein
- Additional Functional Description
- n/a
- Pubmed ID
- 17369437
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| XP_001418061.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 2e-120 | Bitscore: 348
Identities = 181/231 (78%), Positives = 199/231 (86%), Gaps = 7/231 (3%) |
NCBI |
Show Blast
|
| XP_002502190.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 5e-67 | Bitscore: 213
Identities = 111/230 (48%), Positives = 153/230 (67%), Gaps = 6/230 (3%) |
NCBI |
Show Blast
|
| XP_003059561.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 1e-62 | Bitscore: 201
Identities = 103/227 (45%), Positives = 151/227 (67%), Gaps = 6/227 (3%) |
NCBI |
Show Blast
|
| Ol05g03650 |
-
Evalue: 7e-47 | Bitscore: 181
Identities = 108/133 (81%), Positives = 117/133 (87%) |
O.luci |
Show Blast
|
| XP_001694155.1 |
Qb-SNARE protein, Bos1/Membrin family [Chlamydomonas reinhardtii]
Evalue: 1e-32 | Bitscore: 124
Identities = 68/186 (37%), Positives = 107/186 (58%), Gaps = 6/186 (3%) |
NCBI |
Show Blast
|
| XP_002881481.1 |
MEMB11 [Arabidopsis lyrata subsp. lyrata]
Evalue: 2e-32 | Bitscore: 124
Identities = 73/227 (32%), Positives = 125/227 (55%), Gaps = 15/227 (7%) |
NCBI |
Show Blast
|
| NP_001050802.1 |
Os03g0655200 [Oryza sativa Japonica Group]
Evalue: 2e-32 | Bitscore: 124
Identities = 77/233 (33%), Positives = 133/233 (57%), Gaps = 13/233 (6%) |
NCBI |
Show Blast
|
| XP_002464137.1 |
hypothetical protein SORBIDRAFT_01g013020 [Sorghum bicolor]
Evalue: 3e-32 | Bitscore: 124
Identities = 74/232 (32%), Positives = 133/232 (57%), Gaps = 12/232 (5%) |
NCBI |
Show Blast
|
| NP_181227.1 |
golgi SNAP receptor complex member 2 [Arabidopsis thaliana] sp|Q9SJL6.1|MEM11_ARATH RecName: Full=Membrin-11; Short=AtMEMB11; AltName: Full=27 kDa
Evalue: 4e-32 | Bitscore: 123
Identities = 72/227 (32%), Positives = 126/227 (56%), Gaps = 15/227 (7%) |
NCBI |
Show Blast
|
| NP_001150251.1 |
LOC100283881 [Zea mays]
Evalue: 4e-32 | Bitscore: 123
Identities = 76/231 (33%), Positives = 131/231 (57%), Gaps = 11/231 (5%) |
NCBI |
Show Blast
|
| No hits found against database GOS with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| XP_001418061.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 2e-120 | Bitscore: 348
Identities = 181/231 (78%), Positives = 199/231 (86%), Gaps = 7/231 (3%) |
NCBI |
Show Blast
|
| XP_002502190.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 5e-67 | Bitscore: 213
Identities = 111/230 (48%), Positives = 153/230 (67%), Gaps = 6/230 (3%) |
NCBI |
Show Blast
|
| XP_003059561.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 1e-62 | Bitscore: 201
Identities = 103/227 (45%), Positives = 151/227 (67%), Gaps = 6/227 (3%) |
NCBI |
Show Blast
|
| XP_001694155.1 |
Qb-SNARE protein, Bos1/Membrin family [Chlamydomonas reinhardtii]
Evalue: 1e-32 | Bitscore: 124
Identities = 68/186 (37%), Positives = 107/186 (58%), Gaps = 6/186 (3%) |
NCBI |
Show Blast
|
| XP_002881481.1 |
MEMB11 [Arabidopsis lyrata subsp. lyrata]
Evalue: 2e-32 | Bitscore: 124
Identities = 73/227 (32%), Positives = 125/227 (55%), Gaps = 15/227 (7%) |
NCBI |
Show Blast
|
| NP_001050802.1 |
Os03g0655200 [Oryza sativa Japonica Group]
Evalue: 2e-32 | Bitscore: 124
Identities = 77/233 (33%), Positives = 133/233 (57%), Gaps = 13/233 (6%) |
NCBI |
Show Blast
|
| XP_002464137.1 |
hypothetical protein SORBIDRAFT_01g013020 [Sorghum bicolor]
Evalue: 3e-32 | Bitscore: 124
Identities = 74/232 (32%), Positives = 133/232 (57%), Gaps = 12/232 (5%) |
NCBI |
Show Blast
|
| NP_181227.1 |
golgi SNAP receptor complex member 2 [Arabidopsis thaliana] sp|Q9SJL6.1|MEM11_ARATH RecName: Full=Membrin-11; Short=AtMEMB11; AltName: Full=27 kDa
Evalue: 4e-32 | Bitscore: 123
Identities = 72/227 (32%), Positives = 126/227 (56%), Gaps = 15/227 (7%) |
NCBI |
Show Blast
|
| NP_001150251.1 |
LOC100283881 [Zea mays]
Evalue: 4e-32 | Bitscore: 123
Identities = 76/231 (33%), Positives = 131/231 (57%), Gaps = 11/231 (5%) |
NCBI |
Show Blast
|
| XP_001753838.1 |
Qb-SNARE, MEMB1-family [Physcomitrella patens subsp. patens]
Evalue: 2e-31 | Bitscore: 122
Identities = 74/240 (31%), Positives = 130/240 (54%), Gaps = 18/240 (8%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ol05g03650 |
-
Evalue: 7e-47 | Bitscore: 181
Identities = 108/133 (81%), Positives = 117/133 (87%) |
O.luci |
Show Blast
|
| Ol05g03660 |
-
Evalue: 7e-20 | Bitscore: 92
Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 7/84 (8%) |
O.luci |
Show Blast
|
| No hits found against database Self with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q9SJL6 |
Membrin-11 OS=Arabidopsis thaliana GN=MEMB11 PE=1 SV=1
Evalue: 9e-24 | Bitscore: 110
Identities = 72/227 (31%), Positives = 126/227 (55%), Gaps = 15/227 (6%) |
SwissP |
Show Blast
|
| Q9FK28 |
Membrin-12 OS=Arabidopsis thaliana GN=MEMB12 PE=2 SV=1
Evalue: 7e-21 | Bitscore: 100
Identities = 66/228 (28%), Positives = 124/228 (54%), Gaps = 18/228 (7%) |
SwissP |
Show Blast
|
| O35166 |
Golgi SNAP receptor complex member 2 OS=Mus musculus GN=Gosr2 PE=2 SV=2
Evalue: 2e-08 | Bitscore: 58
Identities = 42/177 (23%), Positives = 90/177 (50%), Gaps = 14/177 (7%) |
SwissP |
Show Blast
|
| O35165 |
Golgi SNAP receptor complex member 2 OS=Rattus norvegicus GN=Gosr2 PE=1 SV=2
Evalue: 4e-08 | Bitscore: 58
Identities = 39/171 (22%), Positives = 85/171 (49%), Gaps = 2/171 (1%) |
SwissP |
Show Blast
|
| P41941 |
Probable Golgi SNAP receptor complex member 2 OS=Caenorhabditis elegans GN=gosr-2.1 PE=1 SV=1
Evalue: 7e-08 | Bitscore: 57
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 2/140 (1%) |
SwissP |
Show Blast
|
| A8XP14 |
Probable Golgi SNAP receptor complex member 2 OS=Caenorhabditis briggsae GN=gosr-2.1 PE=3 SV=1
Evalue: 7e-08 | Bitscore: 57
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 7/148 (4%) |
SwissP |
Show Blast
|
| Q9P7G5 |
Protein transport protein bos1 OS=Schizosaccharomyces pombe (strain ATCC 38366 / 972) GN=bos1 PE=2 SV=1
Evalue: 2e-07 | Bitscore: 55
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 1/80 (1%) |
SwissP |
Show Blast
|
| Q6BZQ6 |
Protein transport protein BOS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=BOS1 PE=3 SV=1
Evalue: 8e-07 | Bitscore: 53
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 4/109 (3%) |
SwissP |
Show Blast
|
| O14653 |
Golgi SNAP receptor complex member 2 OS=Homo sapiens GN=GOSR2 PE=1 SV=2
Evalue: 2e-06 | Bitscore: 52
Identities = 41/171 (23%), Positives = 87/171 (50%), Gaps = 2/171 (1%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT2G36900.1 |
| Symbols: MEMB11, ATMEMB11 | membrin 11 | chr2:15491615-15492587 REVERSE LENGTH=678 226
Evalue: 9e-25 | Bitscore: 110
Identities = 72/227 (31%), Positives = 126/227 (55%), Gaps = 15/227 (6%) |
Tair |
Show Blast
|
| AT5G50440.1 |
| Symbols: MEMB12, ATMEMB12 | membrin 12 | chr5:20537644-20538452 REVERSE LENGTH=660 220
Evalue: 7e-22 | Bitscore: 100
Identities = 66/228 (28%), Positives = 124/228 (54%), Gaps = 18/228 (7%) |
Tair |
Show Blast
|
| AT2G36900.2 |
| Symbols: MEMB11, ATMEMB11 | membrin 11 | chr2:15491049-15492587 REVERSE LENGTH=678 226
Evalue: 8e-22 | Bitscore: 100
Identities = 65/212 (30%), Positives = 117/212 (55%), Gaps = 13/212 (6%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 3
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
| EST ID | OtEST00567 |
Support Model | Y |
More Info |
| Mapping Location | 584603..584761,584867..585171 |
Strand - |
|
