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Ostreococcus tauri


Gene ID
Ot05g00520
Locus
Ot05g00520
Functional Description
unnamed product
Gene Type
protein-coding gene
Contig
chrom05
Last Modified On
09 March 2010 1h35
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
unnamed product
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

n/a
 

Protein Domains 


Domain IDDescriptionDatabase
IPR018552 Protein of unknown function DUF2008 InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
CAL53807.1 unnamed protein product [Ostreococcus tauri]
Evalue: 2e-42 | Bitscore: 174
Identities = 90/90 (100%), Positives = 90/90 (100%), Gaps = 0/90 (0%)		 NCBI
Show Blast
ABK25363.1 unknown [Picea sitchensis]
Evalue: 2e-06 | Bitscore: 55
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 11/94 (11%)		 NCBI
Show Blast
CBI14906.1 unnamed protein product [Vitis vinifera]
Evalue: 3e-06 | Bitscore: 54
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 28/103 (27%)		 NCBI
Show Blast
XP_002276097.1 PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 3e-06 | Bitscore: 54
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 28/103 (27%)		 NCBI
Show Blast
XP_002318691.1 predicted protein [Populus trichocarpa]
Evalue: 3e-06 | Bitscore: 54
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 12/94 (12%)		 NCBI
Show Blast
NP_178000.2 unknown protein [Arabidopsis thaliana]
Evalue: 0.0001 | Bitscore: 49
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 0/54 (0%)		 NCBI
Show Blast
XP_002499946.1 DUF2008-containing protein [Micromonas sp. RCC299]
Evalue: 0.0001 | Bitscore: 49
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)		 NCBI
Show Blast
NP_501398.1 hypothetical protein F35H10.5 [Caenorhabditis elegans]
Evalue: 0.0001 | Bitscore: 49
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 3/65 (4%)		 NCBI
Show Blast
NP_001053111.1 Os04g0481500 [Oryza sativa (japonica cultivar-group)]
Evalue: 0.0002 | Bitscore: 48
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 0/58 (0%)		 NCBI
Show Blast
EEH60463.1 predicted protein [Micromonas pusilla CCMP1545]
Evalue: 0.0006 | Bitscore: 47
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 0/54 (0%)		 NCBI
Show Blast

Gene Structure 

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Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
+
Structure Quality
2

CDS  

Locus ID
OT05G00520
Redo Blast
CDS Length
273 nucleotides
CDS Sequence

Protein 

Locus ID
OT05G00520
Redo Blast
Protein Length
91 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a