- Gene ID
- Ot03g05700
- Locus
- Ot03g05700
- Functional Description
- Amino acid transporters (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom03
- Last Modified On
- 08 March 2010 23h51
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
| Sorry, only history comparison allowed for non logged in users!! |
Compare this version with :
Go! |
Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- Amino acid transporters (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
1.
membrane
- Molecular Function
-
n/a
- Biological Process
-
1.
amino acid transport
- Comment
-
Unknown GO IDs: GO:0005279
Protein Domains
| Domain ID | Description | Database |
|---|
|
IPR013057 |
Amino acid transporter, transmembrane |
InterPro |
|
PTHR22950 |
AMINO ACID TRANSPORTER |
HMMPanther |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL53221.1 |
Amino acid transporters (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 920
Identities = 518/518 (100%), Positives = 518/518 (100%), Gaps = 0/518 (0%) |
NCBI |
Show Blast
|
| XP_001417102.1 |
AAAP family transporter: amino acid [Ostreococcus lucimarinus CCE9901]
Evalue: 6e-150 | Bitscore: 535
Identities = 338/515 (65%), Positives = 388/515 (75%), Gaps = 15/515 (2%) |
NCBI |
Show Blast
|
| EAH52260.1 |
unknown [environmental sequence]
Evalue: 3e-59 | Bitscore: 229
Identities = 134/211 (63%), Positives = 151/211 (71%) |
GOS |
Show Blast
|
| XP_001775304.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 2e-40 | Bitscore: 171
Identities = 148/504 (29%), Positives = 233/504 (46%), Gaps = 102/504 (20%) |
NCBI |
Show Blast
|
| XP_001758729.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 9e-36 | Bitscore: 155
Identities = 122/388 (31%), Positives = 202/388 (52%), Gaps = 17/388 (4%) |
NCBI |
Show Blast
|
| XP_002507419.1 |
amino Acid/Auxin permease family [Micromonas sp. RCC299]
Evalue: 7e-30 | Bitscore: 136
Identities = 96/257 (37%), Positives = 143/257 (55%), Gaps = 43/257 (16%) |
NCBI |
Show Blast
|
| XP_001696286.1 |
AAAP aminoacid transporter 5 [Chlamydomonas reinhardtii]
Evalue: 2e-28 | Bitscore: 131
Identities = 131/427 (30%), Positives = 209/427 (48%), Gaps = 39/427 (9%) |
NCBI |
Show Blast
|
| XP_786610.2 |
PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Evalue: 4e-23 | Bitscore: 114
Identities = 105/396 (26%), Positives = 189/396 (47%), Gaps = 32/396 (8%) |
NCBI |
Show Blast
|
| Q6DEL1 |
Putative sodium-coupled neutral amino acid transporter 7 OS=Danio rerio GN=slc38a7 PE=2 SV=1
Evalue: 9e-24 | Bitscore: 112
Identities = 90/396 (22%), Positives = 167/396 (42%), Gaps = 34/396 (8%) |
SwissP |
Show Blast
|
| Q6DFE7 |
Putative sodium-coupled neutral amino acid transporter 7 OS=Xenopus laevis GN=slc38a7 PE=2 SV=1
Evalue: 4e-23 | Bitscore: 109
Identities = 90/385 (23%), Positives = 167/385 (43%), Gaps = 32/385 (8%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAH52260.1 |
unknown [environmental sequence]
Evalue: 3e-59 | Bitscore: 229
Identities = 134/211 (63%), Positives = 151/211 (71%) |
GOS |
Show Blast
|
| EAA85779.1 |
unknown [environmental sequence]
Evalue: 2e-05 | Bitscore: 50
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 8/109 (7%) |
GOS |
Show Blast
|
| EAK00009.1 |
unknown [environmental sequence]
Evalue: 0.0001 | Bitscore: 47
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 1/93 (1%) |
GOS |
Show Blast
|
| EAG56616.1 |
unknown [environmental sequence]
Evalue: 0.0002 | Bitscore: 47
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 1/93 (1%) |
GOS |
Show Blast
|
| EAJ06227.1 |
unknown [environmental sequence]
Evalue: 0.0004 | Bitscore: 45
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 1/93 (1%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL53221.1 |
Amino acid transporters (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 920
Identities = 518/518 (100%), Positives = 518/518 (100%), Gaps = 0/518 (0%) |
NCBI |
Show Blast
|
| XP_001417102.1 |
AAAP family transporter: amino acid [Ostreococcus lucimarinus CCE9901]
Evalue: 6e-150 | Bitscore: 535
Identities = 338/515 (65%), Positives = 388/515 (75%), Gaps = 15/515 (2%) |
NCBI |
Show Blast
|
| XP_001775304.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 2e-40 | Bitscore: 171
Identities = 148/504 (29%), Positives = 233/504 (46%), Gaps = 102/504 (20%) |
NCBI |
Show Blast
|
| XP_001758729.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 9e-36 | Bitscore: 155
Identities = 122/388 (31%), Positives = 202/388 (52%), Gaps = 17/388 (4%) |
NCBI |
Show Blast
|
| XP_002507419.1 |
amino Acid/Auxin permease family [Micromonas sp. RCC299]
Evalue: 7e-30 | Bitscore: 136
Identities = 96/257 (37%), Positives = 143/257 (55%), Gaps = 43/257 (16%) |
NCBI |
Show Blast
|
| XP_001696286.1 |
AAAP aminoacid transporter 5 [Chlamydomonas reinhardtii]
Evalue: 2e-28 | Bitscore: 131
Identities = 131/427 (30%), Positives = 209/427 (48%), Gaps = 39/427 (9%) |
NCBI |
Show Blast
|
| XP_786610.2 |
PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Evalue: 4e-23 | Bitscore: 114
Identities = 105/396 (26%), Positives = 189/396 (47%), Gaps = 32/396 (8%) |
NCBI |
Show Blast
|
| AAI00118.1 |
Solute carrier family 38, member 7 [Danio rerio]
Evalue: 7e-22 | Bitscore: 109
Identities = 100/396 (25%), Positives = 184/396 (46%), Gaps = 34/396 (8%) |
NCBI |
Show Blast
|
| NP_001003648.1 |
solute carrier family 38, member 7 [Danio rerio] sp|Q6DEL1.1|S38A7_DANRE RecName: Full=Putative sodium-coupled neutral amino acid transporter
Evalue: 1e-21 | Bitscore: 108
Identities = 99/396 (25%), Positives = 184/396 (46%), Gaps = 34/396 (8%) |
NCBI |
Show Blast
|
| EEH60574.1 |
amino Acid/Auxin permease family [Micromonas pusilla CCMP1545]
Evalue: 2e-21 | Bitscore: 108
Identities = 85/221 (38%), Positives = 124/221 (56%), Gaps = 17/221 (7%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot01g04510 |
chrom01.0001 [731606..731647,731757..732170,732248..732550,
Evalue: 3e-05 | Bitscore: 45
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 5/139 (3%) |
Self |
Show Blast
|
| Ot16g03020 |
chrom16.0001 [456333..457610]
Evalue: 0.0007 | Bitscore: 40
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 9/96 (9%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q6DEL1 |
Putative sodium-coupled neutral amino acid transporter 7 OS=Danio rerio GN=slc38a7 PE=2 SV=1
Evalue: 9e-24 | Bitscore: 112
Identities = 90/396 (22%), Positives = 167/396 (42%), Gaps = 34/396 (8%) |
SwissP |
Show Blast
|
| Q6DFE7 |
Putative sodium-coupled neutral amino acid transporter 7 OS=Xenopus laevis GN=slc38a7 PE=2 SV=1
Evalue: 4e-23 | Bitscore: 109
Identities = 90/385 (23%), Positives = 167/385 (43%), Gaps = 32/385 (8%) |
SwissP |
Show Blast
|
| Q5R9F5 |
Putative sodium-coupled neutral amino acid transporter 7 OS=Pongo abelii GN=SLC38A7 PE=2 SV=1
Evalue: 2e-21 | Bitscore: 104
Identities = 92/414 (22%), Positives = 169/414 (40%), Gaps = 26/414 (6%) |
SwissP |
Show Blast
|
| Q9NVC3 |
Putative sodium-coupled neutral amino acid transporter 7 OS=Homo sapiens GN=SLC38A7 PE=2 SV=1
Evalue: 2e-21 | Bitscore: 103
Identities = 92/414 (22%), Positives = 169/414 (40%), Gaps = 26/414 (6%) |
SwissP |
Show Blast
|
| A7E3U5 |
Putative sodium-coupled neutral amino acid transporter 7 OS=Bos taurus GN=SLC38A7 PE=2 SV=1
Evalue: 5e-21 | Bitscore: 102
Identities = 89/381 (23%), Positives = 157/381 (41%), Gaps = 27/381 (7%) |
SwissP |
Show Blast
|
| Q8BWH0 |
Putative sodium-coupled neutral amino acid transporter 7 OS=Mus musculus GN=Slc38a7 PE=1 SV=1
Evalue: 2e-20 | Bitscore: 100
Identities = 92/401 (22%), Positives = 165/401 (41%), Gaps = 32/401 (7%) |
SwissP |
Show Blast
|
| Q3USY0 |
Putative sodium-coupled neutral amino acid transporter 11 OS=Mus musculus GN=Slc38a11 PE=2 SV=2
Evalue: 5e-20 | Bitscore: 99
Identities = 79/370 (21%), Positives = 159/370 (42%), Gaps = 35/370 (9%) |
SwissP |
Show Blast
|
| Q6JWR2 |
Putative sodium-coupled neutral amino acid transporter 7 OS=Rattus norvegicus GN=Slc38a7 PE=2 SV=1
Evalue: 9e-20 | Bitscore: 98
Identities = 89/401 (22%), Positives = 165/401 (41%), Gaps = 32/401 (7%) |
SwissP |
Show Blast
|
| Q5HZH7 |
Putative sodium-coupled neutral amino acid transporter 8 OS=Mus musculus GN=Slc38a8 PE=2 SV=1
Evalue: 3e-19 | Bitscore: 97
Identities = 91/392 (23%), Positives = 163/392 (41%), Gaps = 45/392 (11%) |
SwissP |
Show Blast
|
| Q5EA97 |
Putative sodium-coupled neutral amino acid transporter 11 OS=Bos taurus GN=SLC38A11 PE=2 SV=1
Evalue: 5e-19 | Bitscore: 96
Identities = 82/368 (22%), Positives = 158/368 (42%), Gaps = 31/368 (8%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT1G80510.1 |
| Symbols: | amino acid transporter family protein | chr1:30277992-30279461 FORWARD
Evalue: 7e-12 | Bitscore: 68
Identities = 86/392 (21%), Positives = 144/392 (36%), Gaps = 42/392 (10%) |
Tair |
Show Blast
|
| AT3G56200.1 |
| Symbols: | amino acid transporter family protein | chr3:20861066-20862758 FORWARD
Evalue: 9e-09 | Bitscore: 58
Identities = 85/405 (20%), Positives = 157/405 (38%), Gaps = 51/405 (12%) |
Tair |
Show Blast
|
| AT3G30390.2 |
| Symbols: | amino acid transporter family protein | chr3:11979591-11981306 REVERSE
Evalue: 2e-08 | Bitscore: 57
Identities = 96/413 (23%), Positives = 158/413 (38%), Gaps = 59/413 (14%) |
Tair |
Show Blast
|
| AT3G30390.1 |
| Symbols: | amino acid transporter family protein | chr3:11979591-11981306 REVERSE
Evalue: 2e-08 | Bitscore: 57
Identities = 96/413 (23%), Positives = 158/413 (38%), Gaps = 59/413 (14%) |
Tair |
Show Blast
|
| AT5G38820.1 |
| Symbols: | amino acid transporter family protein | chr5:15560711-15562412 FORWARD
Evalue: 3e-08 | Bitscore: 57
Identities = 93/412 (22%), Positives = 157/412 (38%), Gaps = 57/412 (13%) |
Tair |
Show Blast
|
| AT2G40420.1 |
| Symbols: | amino acid transporter family protein | chr2:16884378-16886060 FORWARD
Evalue: 7e-08 | Bitscore: 55
Identities = 36/104 (34%), Positives = 64/104 (61%) |
Tair |
Show Blast
|
| AT5G02180.1 |
| Symbols: | amino acid transporter family protein | chr5:431032-433542 FORWARD
Evalue: 4e-07 | Bitscore: 53
Identities = 83/377 (22%), Positives = 150/377 (39%), Gaps = 54/377 (14%) |
Tair |
Show Blast
|
| AT1G61270.1 |
| Symbols: | lysine and histidine specific transporter, putative | chr1:22603330-22605805 REVERSE
Evalue: 8e-07 | Bitscore: 52
Identities = 67/307 (21%), Positives = 123/307 (40%), Gaps = 43/307 (14%) |
Tair |
Show Blast
|
| AT1G10010.1 |
| Symbols: AAP8 | AAP8 (amino acid permease 8); amino acid transmembrane transporter | chr1:3265978-3268728 FORWARD
Evalue: 2e-06 | Bitscore: 50
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 6/125 (4%) |
Tair |
Show Blast
|
| AT5G09220.1 |
| Symbols: AAP2 | AAP2 (AMINO ACID PERMEASE 2); amino acid transmembrane transporter | chr5:2866868-2868864 FORWARD
Evalue: 4e-06 | Bitscore: 49
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 6/112 (5%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
