- Gene ID
- Ot03g03190
- Locus
- Ot03g03190
- Functional Description
- beta amylase 2 (IC)
- Gene Type
- protein-coding gene
- Contig
- chrom03
- Last Modified On
- 08 March 2010 23h10
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- beta amylase 2 (IC)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
catalytic activity
2.
beta-amylase activity
3.
cation binding
- Biological Process
-
1.
polysaccharide catabolic process
2.
carbohydrate metabolic process
Protein Domains
Domain ID | Description | Database |
IPR001554 |
Glycoside hydrolase, family 14 |
InterPro |
IPR017853 |
Glycoside hydrolase, catalytic core |
InterPro |
IPR013781 |
Glycoside hydrolase, subgroup, catalytic core |
InterPro |
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
CAL52970.1 |
beta amylase 2 (IC) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 743 Identities = 365/365 (100%), Positives = 365/365 (100%), Gaps = 0/365 (0%) |
NCBI |
Show Blast
|
XP_001416970.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 2e-146 | Bitscore: 523 Identities = 245/285 (85%), Positives = 262/285 (91%), Gaps = 3/285 (1%) |
NCBI |
Show Blast
|
XP_002501612.1 |
glycoside hydrolase family 14 protein [Micromonas sp. RCC299]
Evalue: 3e-104 | Bitscore: 382 Identities = 180/258 (69%), Positives = 206/258 (79%), Gaps = 3/258 (1%) |
NCBI |
Show Blast
|
EEH53366.1 |
glycoside hydrolase family 14 protein [Micromonas pusilla CCMP1545]
Evalue: 1e-101 | Bitscore: 374 Identities = 176/256 (68%), Positives = 200/256 (78%), Gaps = 2/256 (0%) |
NCBI |
Show Blast
|
EAD08640.1 |
unknown [environmental sequence]
Evalue: 1e-102 | Bitscore: 371 Identities = 169/205 (82%), Positives = 185/205 (90%), Gaps = 1/205 (0%) |
GOS |
Show Blast
|
EAD82603.1 |
unknown [environmental sequence]
Evalue: 7e-74 | Bitscore: 277 Identities = 128/173 (73%), Positives = 144/173 (83%), Gaps = 4/173 (2%) |
GOS |
Show Blast
|
AAY89374.1 |
beta-amylase 1 [Nicotiana langsdorffii x Nicotiana sanderae]
Evalue: 1e-64 | Bitscore: 251 Identities = 121/250 (48%), Positives = 160/250 (64%), Gaps = 12/250 (4%) |
NCBI |
Show Blast
|
XP_002314522.1 |
predicted protein [Populus trichocarpa]
Evalue: 1e-62 | Bitscore: 244 Identities = 121/254 (47%), Positives = 157/254 (61%), Gaps = 20/254 (7%) |
NCBI |
Show Blast
|
CAN71375.1 |
hypothetical protein [Vitis vinifera]
Evalue: 3e-62 | Bitscore: 243 Identities = 119/254 (46%), Positives = 158/254 (62%), Gaps = 22/254 (8%) |
NCBI |
Show Blast
|
XP_002285569.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 4e-62 | Bitscore: 243 Identities = 119/254 (46%), Positives = 158/254 (62%), Gaps = 22/254 (8%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
EAD08640.1 |
unknown [environmental sequence]
Evalue: 1e-102 | Bitscore: 371 Identities = 169/205 (82%), Positives = 185/205 (90%), Gaps = 1/205 (0%) |
GOS |
Show Blast
|
EAD82603.1 |
unknown [environmental sequence]
Evalue: 7e-74 | Bitscore: 277 Identities = 128/173 (73%), Positives = 144/173 (83%), Gaps = 4/173 (2%) |
GOS |
Show Blast
|
EAC75085.1 |
unknown [environmental sequence]
Evalue: 4e-40 | Bitscore: 165 Identities = 97/245 (39%), Positives = 126/245 (51%), Gaps = 38/245 (15%) |
GOS |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
CAL52970.1 |
beta amylase 2 (IC) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 743 Identities = 365/365 (100%), Positives = 365/365 (100%), Gaps = 0/365 (0%) |
NCBI |
Show Blast
|
XP_001416970.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 2e-146 | Bitscore: 523 Identities = 245/285 (85%), Positives = 262/285 (91%), Gaps = 3/285 (1%) |
NCBI |
Show Blast
|
XP_002501612.1 |
glycoside hydrolase family 14 protein [Micromonas sp. RCC299]
Evalue: 3e-104 | Bitscore: 382 Identities = 180/258 (69%), Positives = 206/258 (79%), Gaps = 3/258 (1%) |
NCBI |
Show Blast
|
EEH53366.1 |
glycoside hydrolase family 14 protein [Micromonas pusilla CCMP1545]
Evalue: 1e-101 | Bitscore: 374 Identities = 176/256 (68%), Positives = 200/256 (78%), Gaps = 2/256 (0%) |
NCBI |
Show Blast
|
AAY89374.1 |
beta-amylase 1 [Nicotiana langsdorffii x Nicotiana sanderae]
Evalue: 1e-64 | Bitscore: 251 Identities = 121/250 (48%), Positives = 160/250 (64%), Gaps = 12/250 (4%) |
NCBI |
Show Blast
|
XP_002314522.1 |
predicted protein [Populus trichocarpa]
Evalue: 1e-62 | Bitscore: 244 Identities = 121/254 (47%), Positives = 157/254 (61%), Gaps = 20/254 (7%) |
NCBI |
Show Blast
|
CAN71375.1 |
hypothetical protein [Vitis vinifera]
Evalue: 3e-62 | Bitscore: 243 Identities = 119/254 (46%), Positives = 158/254 (62%), Gaps = 22/254 (8%) |
NCBI |
Show Blast
|
XP_002285569.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 4e-62 | Bitscore: 243 Identities = 119/254 (46%), Positives = 158/254 (62%), Gaps = 22/254 (8%) |
NCBI |
Show Blast
|
XP_002518196.1 |
Beta-amylase, putative [Ricinus communis]
Evalue: 8e-62 | Bitscore: 241 Identities = 119/250 (47%), Positives = 156/250 (62%), Gaps = 12/250 (4%) |
NCBI |
Show Blast
|
NP_189034.1 |
BAM1 (BETA-AMYLASE 1); beta-amylase [Arabidopsis thaliana]
Evalue: 9e-62 | Bitscore: 241 Identities = 121/250 (48%), Positives = 157/250 (62%), Gaps = 14/250 (5%) |
NCBI |
Show Blast
|
No hits found against database O.RCC809 with an e-value better than 1e-3. |
No hits found against database O.luci with an e-value better than 1e-3. |
ProteinID | Description / BlastScore | Database | Actions |
Ot02g06980 |
chrom02.0001 [922179..922613,922679..922764,922799..923660] inframe stop codon incomplete
Evalue: 7e-24 | Bitscore: 106 Identities = 86/292 (29%), Positives = 116/292 (39%), Gaps = 55/292 (18%) |
Self |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
P10538 |
Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3
Evalue: 2e-51 | Bitscore: 202 Identities = 106/251 (42%), Positives = 147/251 (58%), Gaps = 19/251 (7%) |
SwissP |
Show Blast
|
O22585 |
Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1
Evalue: 3e-50 | Bitscore: 199 Identities = 104/251 (41%), Positives = 150/251 (59%), Gaps = 19/251 (7%) |
SwissP |
Show Blast
|
P55005 |
Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1
Evalue: 5e-49 | Bitscore: 195 Identities = 109/268 (40%), Positives = 150/268 (55%), Gaps = 16/268 (5%) |
SwissP |
Show Blast
|
O64407 |
Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1
Evalue: 1e-48 | Bitscore: 194 Identities = 104/248 (41%), Positives = 147/248 (59%), Gaps = 13/248 (5%) |
SwissP |
Show Blast
|
O65015 |
Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1
Evalue: 2e-47 | Bitscore: 189 Identities = 104/259 (40%), Positives = 150/259 (57%), Gaps = 19/259 (7%) |
SwissP |
Show Blast
|
P10537 |
Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4
Evalue: 3e-47 | Bitscore: 189 Identities = 102/248 (41%), Positives = 147/248 (59%), Gaps = 12/248 (4%) |
SwissP |
Show Blast
|
P82993 |
Beta-amylase OS=Hordeum spontaneum GN=BMY1 PE=1 SV=1
Evalue: 2e-46 | Bitscore: 186 Identities = 103/247 (41%), Positives = 142/247 (57%), Gaps = 13/247 (5%) |
SwissP |
Show Blast
|
P16098 |
Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1
Evalue: 6e-46 | Bitscore: 184 Identities = 103/247 (41%), Positives = 141/247 (57%), Gaps = 13/247 (5%) |
SwissP |
Show Blast
|
P93594 |
Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=1
Evalue: 8e-46 | Bitscore: 184 Identities = 102/252 (40%), Positives = 147/252 (58%), Gaps = 13/252 (5%) |
SwissP |
Show Blast
|
P25853 |
Beta-amylase OS=Arabidopsis thaliana GN=BMY1 PE=2 SV=1
Evalue: 2e-45 | Bitscore: 183 Identities = 100/248 (40%), Positives = 141/248 (56%), Gaps = 13/248 (5%) |
SwissP |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
AT3G23920.1 |
| Symbols: BMY7, TR-BAMY, BAM1 | BAM1/BMY7/TR-BAMY (BETA-AMYLASE 1); beta-amylase | chr3:8641729-8644206 FORWARD
Evalue: 3e-64 | Bitscore: 242 Identities = 121/250 (48%), Positives = 157/250 (62%), Gaps = 14/250 (5%) |
Tair |
Show Blast
|
AT4G17090.1 |
| Symbols: BMY8, BAM3, CT-BMY | CT-BMY (BETA-AMYLASE 3, BETA-AMYLASE 8); beta-amylase | chr4:9605282-9607266
Evalue: 7e-60 | Bitscore: 227 Identities = 114/251 (45%), Positives = 152/251 (60%), Gaps = 20/251 (7%) |
Tair |
Show Blast
|
AT4G00490.1 |
| Symbols: BMY9, BAM2 | BAM2/BMY9 (BETA-AMYLASE 2); beta-amylase | chr4:222422-224862 FORWARD
Evalue: 8e-51 | Bitscore: 197 Identities = 110/254 (43%), Positives = 149/254 (58%), Gaps = 21/254 (8%) |
Tair |
Show Blast
|
AT2G32290.1 |
| Symbols: BMY5, BAM6 | BAM6/BMY5 (BETA-AMYLASE 6); beta-amylase | chr2:13721720-13723983 REVERSE
Evalue: 1e-50 | Bitscore: 196 Identities = 99/248 (39%), Positives = 149/248 (60%), Gaps = 14/248 (5%) |
Tair |
Show Blast
|
AT4G15210.1 |
| Symbols: BMY1, BAM5, AT-BETA-AMY, RAM1, ATBETA-AMY | ATBETA-AMY (BETA-AMYLASE); beta-amylase | chr4:8666734-8669357
Evalue: 2e-46 | Bitscore: 183 Identities = 100/248 (40%), Positives = 141/248 (56%), Gaps = 13/248 (5%) |
Tair |
Show Blast
|
AT5G55700.1 |
| Symbols: BMY6, BAM4 | BAM4/BMY6 (BETA-AMYLASE 4); beta-amylase | chr5:22569099-22571928 FORWARD
Evalue: 1e-45 | Bitscore: 180 Identities = 95/254 (37%), Positives = 131/254 (51%), Gaps = 23/254 (9%) |
Tair |
Show Blast
|
AT4G15210.2 |
| Symbols: BMY1, BAM5, AT-BETA-AMY, RAM1, ATBETA-AMY | ATBETA-AMY (BETA-AMYLASE); beta-amylase | chr4:8666852-8669357
Evalue: 8e-43 | Bitscore: 171 Identities = 90/218 (41%), Positives = 127/218 (58%), Gaps = 11/218 (5%) |
Tair |
Show Blast
|
AT2G45880.1 |
| Symbols: BMY4, BAM7 | BAM7/BMY4 (BETA-AMYLASE 7); beta-amylase | chr2:18885748-18888898 REVERSE
Evalue: 9e-37 | Bitscore: 150 Identities = 94/254 (37%), Positives = 134/254 (52%), Gaps = 21/254 (8%) |
Tair |
Show Blast
|
AT5G45300.1 |
| Symbols: BMY2, BAM8 | BAM8/BMY2 (BETA-AMYLASE 8); beta-amylase | chr5:18370863-18373923 FORWARD
Evalue: 3e-28 | Bitscore: 122 Identities = 71/193 (36%), Positives = 104/193 (53%), Gaps = 13/193 (6%) |
Tair |
Show Blast
|
AT5G45300.2 |
| Symbols: BMY2, BAM8 | BAM8/BMY2 (BETA-AMYLASE 8); beta-amylase | chr5:18370863-18373923 FORWARD
Evalue: 4e-28 | Bitscore: 122 Identities = 71/193 (36%), Positives = 104/193 (53%), Gaps = 13/193 (6%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
EST ID | OtEST00399 |
Support Model | Y |
More Info |
Mapping Location | 509729..510187 |
Strand - |
|