- Gene ID
- Ot03g02840
- Locus
- Ot03g02840
- Functional Description
- putative Alanine aminotransferase (IC)
- Gene Type
- protein-coding gene
- Contig
- chrom03
- Last Modified On
- 08 March 2010 23h07
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- putative Alanine aminotransferase (IC)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
catalytic activity
2.
pyridoxal phosphate binding
- Biological Process
-
n/a
Protein Domains
| Domain ID | Description | Database |
|---|
|
IPR004839 |
Aminotransferase, class I/II |
InterPro |
|
IPR015424 |
Pyridoxal phosphate-dependent transferase, major domain |
InterPro |
|
IPR001176 |
1-aminocyclopropane-1-carboxylate synthase |
InterPro |
|
IPR000408 |
Regulator of chromosome condensation, RCC1 |
InterPro |
|
PTHR11751 |
SUBGROUP I AMINOTRANSFERASE RELATED |
HMMPanther |
|
IPR015421 |
Pyridoxal phosphate-dependent transferase, major region, subdomain 1 |
InterPro |
|
IPR015422 |
Pyridoxal phosphate-dependent transferase, major region, subdomain 2 |
InterPro |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL52935.1 |
putative Alanine aminotransferase (IC) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 944
Identities = 472/472 (100%), Positives = 472/472 (100%), Gaps = 0/472 (0%) |
NCBI |
Show Blast
|
| XP_001416955.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 722
Identities = 349/465 (75%), Positives = 407/465 (87%), Gaps = 0/465 (0%) |
NCBI |
Show Blast
|
| XP_002499950.1 |
alanine aminotransferase [Micromonas sp. RCC299]
Evalue: 2e-153 | Bitscore: 546
Identities = 290/465 (62%), Positives = 346/465 (74%), Gaps = 12/465 (2%) |
NCBI |
Show Blast
|
| EEH60460.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 5e-147 | Bitscore: 525
Identities = 270/479 (56%), Positives = 340/479 (70%), Gaps = 10/479 (2%) |
NCBI |
Show Blast
|
| XP_002463187.1 |
hypothetical protein SORBIDRAFT_02g039340 [Sorghum bicolor]
Evalue: 4e-140 | Bitscore: 502
Identities = 261/477 (54%), Positives = 333/477 (69%), Gaps = 10/477 (2%) |
NCBI |
Show Blast
|
| EEE67593.1 |
hypothetical protein OsJ_25140 [Oryza sativa Japonica Group]
Evalue: 4e-139 | Bitscore: 499
Identities = 256/477 (53%), Positives = 334/477 (70%), Gaps = 10/477 (2%) |
NCBI |
Show Blast
|
| EEC82447.1 |
hypothetical protein OsI_26881 [Oryza sativa Indica Group]
Evalue: 4e-139 | Bitscore: 499
Identities = 256/477 (53%), Positives = 334/477 (70%), Gaps = 10/477 (2%) |
NCBI |
Show Blast
|
| XP_001769989.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 4e-138 | Bitscore: 495
Identities = 262/477 (54%), Positives = 332/477 (69%), Gaps = 10/477 (2%) |
NCBI |
Show Blast
|
| BAC79866.1 |
putative alanine aminotransferase [Oryza sativa Japonica Group]
Evalue: 2e-137 | Bitscore: 493
Identities = 254/475 (53%), Positives = 332/475 (69%), Gaps = 8/475 (1%) |
NCBI |
Show Blast
|
| AAV64237.1 |
putative alanine aminotransferase [Zea mays]
Evalue: 3e-136 | Bitscore: 489
Identities = 253/473 (53%), Positives = 330/473 (69%), Gaps = 10/473 (2%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAE34799.1 |
unknown [environmental sequence]
Evalue: 8e-94 | Bitscore: 343
Identities = 165/236 (69%), Positives = 186/236 (78%), Gaps = 1/236 (0%) |
GOS |
Show Blast
|
| EAJ40200.1 |
unknown [environmental sequence]
Evalue: 3e-82 | Bitscore: 305
Identities = 179/489 (36%), Positives = 256/489 (52%), Gaps = 53/489 (10%) |
GOS |
Show Blast
|
| EAD78252.1 |
unknown [environmental sequence]
Evalue: 6e-53 | Bitscore: 207
Identities = 100/171 (58%), Positives = 122/171 (71%), Gaps = 1/171 (0%) |
GOS |
Show Blast
|
| EAC72750.1 |
unknown [environmental sequence]
Evalue: 4e-42 | Bitscore: 172
Identities = 100/284 (35%), Positives = 147/284 (51%), Gaps = 20/284 (7%) |
GOS |
Show Blast
|
| EAF79849.1 |
unknown [environmental sequence]
Evalue: 3e-37 | Bitscore: 155
Identities = 84/171 (49%), Positives = 111/171 (64%), Gaps = 3/171 (1%) |
GOS |
Show Blast
|
| EAK28260.1 |
unknown [environmental sequence]
Evalue: 6e-36 | Bitscore: 151
Identities = 136/467 (29%), Positives = 224/467 (47%), Gaps = 84/467 (17%) |
GOS |
Show Blast
|
| EAI69790.1 |
unknown [environmental sequence]
Evalue: 2e-33 | Bitscore: 143
Identities = 121/456 (26%), Positives = 202/456 (44%), Gaps = 74/456 (16%) |
GOS |
Show Blast
|
| EAK69404.1 |
unknown [environmental sequence]
Evalue: 3e-32 | Bitscore: 139
Identities = 119/456 (26%), Positives = 199/456 (43%), Gaps = 74/456 (16%) |
GOS |
Show Blast
|
| EAJ24349.1 |
unknown [environmental sequence]
Evalue: 5e-31 | Bitscore: 135
Identities = 110/370 (29%), Positives = 178/370 (48%), Gaps = 38/370 (10%) |
GOS |
Show Blast
|
| EAI35910.1 |
unknown [environmental sequence]
Evalue: 7e-31 | Bitscore: 134
Identities = 122/467 (26%), Positives = 206/467 (44%), Gaps = 93/467 (19%) |
GOS |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL52935.1 |
putative Alanine aminotransferase (IC) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 944
Identities = 472/472 (100%), Positives = 472/472 (100%), Gaps = 0/472 (0%) |
NCBI |
Show Blast
|
| XP_001416955.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 722
Identities = 349/465 (75%), Positives = 407/465 (87%), Gaps = 0/465 (0%) |
NCBI |
Show Blast
|
| XP_002499950.1 |
alanine aminotransferase [Micromonas sp. RCC299]
Evalue: 2e-153 | Bitscore: 546
Identities = 290/465 (62%), Positives = 346/465 (74%), Gaps = 12/465 (2%) |
NCBI |
Show Blast
|
| EEH60460.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 5e-147 | Bitscore: 525
Identities = 270/479 (56%), Positives = 340/479 (70%), Gaps = 10/479 (2%) |
NCBI |
Show Blast
|
| XP_002463187.1 |
hypothetical protein SORBIDRAFT_02g039340 [Sorghum bicolor]
Evalue: 4e-140 | Bitscore: 502
Identities = 261/477 (54%), Positives = 333/477 (69%), Gaps = 10/477 (2%) |
NCBI |
Show Blast
|
| EEE67593.1 |
hypothetical protein OsJ_25140 [Oryza sativa Japonica Group]
Evalue: 4e-139 | Bitscore: 499
Identities = 256/477 (53%), Positives = 334/477 (70%), Gaps = 10/477 (2%) |
NCBI |
Show Blast
|
| EEC82447.1 |
hypothetical protein OsI_26881 [Oryza sativa Indica Group]
Evalue: 4e-139 | Bitscore: 499
Identities = 256/477 (53%), Positives = 334/477 (70%), Gaps = 10/477 (2%) |
NCBI |
Show Blast
|
| XP_001769989.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 4e-138 | Bitscore: 495
Identities = 262/477 (54%), Positives = 332/477 (69%), Gaps = 10/477 (2%) |
NCBI |
Show Blast
|
| BAC79866.1 |
putative alanine aminotransferase [Oryza sativa Japonica Group]
Evalue: 2e-137 | Bitscore: 493
Identities = 254/475 (53%), Positives = 332/475 (69%), Gaps = 8/475 (1%) |
NCBI |
Show Blast
|
| AAV64237.1 |
putative alanine aminotransferase [Zea mays]
Evalue: 3e-136 | Bitscore: 489
Identities = 253/473 (53%), Positives = 330/473 (69%), Gaps = 10/473 (2%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot11g01840 |
chrom11.0001 [315312..318296] incomplete
Evalue: 8e-23 | Bitscore: 103
Identities = 98/378 (25%), Positives = 153/378 (40%), Gaps = 36/378 (9%) |
Self |
Show Blast
|
| Ot16g00690 |
chrom16.0001 [98028..99374]
Evalue: 1e-15 | Bitscore: 79
Identities = 100/382 (26%), Positives = 151/382 (39%), Gaps = 58/382 (15%) |
Self |
Show Blast
|
| Ot01g04390 |
chrom01.0001 [717614..719108,719295..719299]
Evalue: 2e-12 | Bitscore: 68
Identities = 87/356 (24%), Positives = 143/356 (40%), Gaps = 25/356 (7%) |
Self |
Show Blast
|
| Ot08g02620 |
chrom08.0001 [439726..439797,439832..441094]
Evalue: 2e-11 | Bitscore: 65
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 12/163 (7%) |
Self |
Show Blast
|
| Ot06g02820 |
chrom06.0001 [428002..429135] incomplete
Evalue: 0.0001 | Bitscore: 42
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 5/106 (4%) |
Self |
Show Blast
|
| Ot18g01870 |
chrom18.0001 [286659..287456] incomplete
Evalue: 0.0005 | Bitscore: 40
Identities = 39/143 (27%), Positives = 58/143 (40%), Gaps = 13/143 (9%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| P52894 |
Alanine aminotransferase 2 OS=Hordeum vulgare PE=2 SV=1
Evalue: 1e-135 | Bitscore: 480
Identities = 242/478 (50%), Positives = 321/478 (67%), Gaps = 11/478 (2%) |
SwissP |
Show Blast
|
| P34106 |
Alanine aminotransferase 2 OS=Panicum miliaceum PE=1 SV=1
Evalue: 1e-128 | Bitscore: 459
Identities = 242/474 (51%), Positives = 320/474 (67%), Gaps = 10/474 (2%) |
SwissP |
Show Blast
|
| Q54MJ7 |
Probable alanine aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=gpt PE=3 SV=1
Evalue: 1e-123 | Bitscore: 443
Identities = 232/473 (49%), Positives = 310/473 (65%), Gaps = 14/473 (2%) |
SwissP |
Show Blast
|
| Q6NYL5 |
Alanine aminotransferase 2-like OS=Danio rerio GN=gpt2l PE=2 SV=2
Evalue: 1e-101 | Bitscore: 370
Identities = 201/474 (42%), Positives = 284/474 (59%), Gaps = 11/474 (2%) |
SwissP |
Show Blast
|
| Q6GM82 |
Alanine aminotransferase 2 OS=Xenopus laevis GN=gpt2 PE=2 SV=1
Evalue: 3e-99 | Bitscore: 362
Identities = 200/474 (42%), Positives = 278/474 (58%), Gaps = 11/474 (2%) |
SwissP |
Show Blast
|
| Q28DB5 |
Alanine aminotransferase 2 OS=Xenopus tropicalis GN=gpt2 PE=2 SV=1
Evalue: 9e-98 | Bitscore: 357
Identities = 194/473 (41%), Positives = 275/473 (58%), Gaps = 11/473 (2%) |
SwissP |
Show Blast
|
| Q8BGT5 |
Alanine aminotransferase 2 OS=Mus musculus GN=Gpt2 PE=2 SV=1
Evalue: 2e-97 | Bitscore: 357
Identities = 192/472 (40%), Positives = 276/472 (58%), Gaps = 10/472 (2%) |
SwissP |
Show Blast
|
| Q8TD30 |
Alanine aminotransferase 2 OS=Homo sapiens GN=GPT2 PE=1 SV=1
Evalue: 2e-96 | Bitscore: 353
Identities = 194/473 (41%), Positives = 275/473 (58%), Gaps = 11/473 (2%) |
SwissP |
Show Blast
|
| P52893 |
Probable alanine aminotransferase, mitochondrial OS=Saccharomyces cerevisiae GN=ALT1 PE=1 SV=1
Evalue: 3e-95 | Bitscore: 349
Identities = 203/485 (41%), Positives = 274/485 (56%), Gaps = 30/485 (6%) |
SwissP |
Show Blast
|
| Q8QZR5 |
Alanine aminotransferase 1 OS=Mus musculus GN=Gpt PE=2 SV=3
Evalue: 9e-94 | Bitscore: 344
Identities = 195/474 (41%), Positives = 267/474 (56%), Gaps = 11/474 (2%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT1G17290.1 |
| Symbols: ALAAT1 | ALAAT1 (ALANINE AMINOTRANSFERAS); alanine transaminase | chr1:5922764-5926086 FORWARD
Evalue: 1e-137 | Bitscore: 486
Identities = 243/475 (51%), Positives = 316/475 (66%), Gaps = 10/475 (2%) |
Tair |
Show Blast
|
| AT1G72330.1 |
| Symbols: ALAAT2 | ALAAT2 (ALANINE AMINOTRANSFERASE 2); alanine transaminase | chr1:27237299-27240233 FORWARD
Evalue: 1e-136 | Bitscore: 481
Identities = 238/475 (50%), Positives = 317/475 (66%), Gaps = 10/475 (2%) |
Tair |
Show Blast
|
| AT1G70580.1 |
| Symbols: GGT2, AOAT2 | AOAT2 (GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE 2); alanine transaminase |
Evalue: 1e-113 | Bitscore: 405
Identities = 205/472 (43%), Positives = 295/472 (62%), Gaps = 17/472 (3%) |
Tair |
Show Blast
|
| AT1G70580.3 |
| Symbols: GGT2, AOAT2 | AOAT2 (GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE 2); alanine transaminase |
Evalue: 1e-113 | Bitscore: 405
Identities = 205/472 (43%), Positives = 295/472 (62%), Gaps = 17/472 (3%) |
Tair |
Show Blast
|
| AT1G70580.2 |
| Symbols: GGT2, AOAT2 | AOAT2 (GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE 2); alanine transaminase |
Evalue: 1e-113 | Bitscore: 405
Identities = 205/472 (43%), Positives = 295/472 (62%), Gaps = 17/472 (3%) |
Tair |
Show Blast
|
| AT1G70580.4 |
| Symbols: GGT2, AOAT2 | AOAT2 (GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE 2); alanine transaminase |
Evalue: 1e-113 | Bitscore: 405
Identities = 205/472 (43%), Positives = 295/472 (62%), Gaps = 17/472 (3%) |
Tair |
Show Blast
|
| AT1G23310.1 |
| Symbols: AOAT1, GGT1 | GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1) | chr1:8268709-8271318 REVERSE
Evalue: 1e-112 | Bitscore: 400
Identities = 202/473 (42%), Positives = 296/473 (62%), Gaps = 17/473 (3%) |
Tair |
Show Blast
|
| AT1G23310.2 |
| Symbols: AOAT1, GGT1 | GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1) | chr1:8268797-8271318 REVERSE
Evalue: 1e-104 | Bitscore: 374
Identities = 191/440 (43%), Positives = 277/440 (62%), Gaps = 17/440 (3%) |
Tair |
Show Blast
|
| AT1G72330.2 |
| Symbols: ALAAT2 | ALAAT2 (ALANINE AMINOTRANSFERASE 2) | chr1:27237299-27239853 FORWARD
Evalue: 2e-92 | Bitscore: 336
Identities = 170/346 (49%), Positives = 227/346 (65%), Gaps = 10/346 (2%) |
Tair |
Show Blast
|
| AT2G24850.1 |
| Symbols: TAT, TAT3 | TAT3 (TYROSINE AMINOTRANSFERASE 3); transaminase | chr2:10590149-10592231 REVERSE
Evalue: 5e-19 | Bitscore: 92
Identities = 62/192 (32%), Positives = 93/192 (48%), Gaps = 13/192 (6%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
| EST ID | OtEST02736 |
Support Model | Y |
More Info |
| Mapping Location | 446903..447970 |
Strand - |
| EST ID | OtEST03222 |
Support Model | Y |
More Info |
| Mapping Location | 447033..448451 |
Strand - |
|
