- Gene ID
- Ot02g06580
- Locus
- Ot02g06580
- Functional Description
- putative pyruvate-formatelyase activating enzyme (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom02
- Last Modified On
- 08 March 2010 22h00
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- putative pyruvate-formatelyase activating enzyme (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
iron ion binding
2.
oxidoreductase activity
3.
4 iron, 4 sulfur cluster binding
- Biological Process
-
1.
obsolete oxygen and reactive oxygen species metabolic process
2.
obsolete oxidation-reduction process
Protein Domains
Domain ID | Description | Database |
SSF102114 |
Radical SAM enzymes |
superfamily |
IPR007197 |
Radical SAM |
InterPro |
IPR001989 |
Radical-activating enzyme, conserved site |
InterPro |
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
CAL52533.1 |
putative pyruvate-formatelyase activating enzyme (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 672 Identities = 382/382 (100%), Positives = 382/382 (100%), Gaps = 0/382 (0%) |
NCBI |
Show Blast
|
XP_001416074.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 9e-81 | Bitscore: 305 Identities = 163/265 (61%), Positives = 202/265 (76%), Gaps = 6/265 (2%) |
NCBI |
Show Blast
|
XP_002500323.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 6e-51 | Bitscore: 205 Identities = 134/274 (48%), Positives = 171/274 (62%), Gaps = 27/274 (9%) |
NCBI |
Show Blast
|
EEH51095.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 2e-48 | Bitscore: 197 Identities = 132/261 (50%), Positives = 164/261 (62%), Gaps = 15/261 (5%) |
NCBI |
Show Blast
|
EAC70877.1 |
unknown [environmental sequence]
Evalue: 2e-41 | Bitscore: 169 Identities = 88/206 (42%), Positives = 118/206 (57%), Gaps = 3/206 (1%) |
GOS |
Show Blast
|
EAD67716.1 |
unknown [environmental sequence]
Evalue: 2e-34 | Bitscore: 145 Identities = 85/194 (43%), Positives = 106/194 (54%), Gaps = 23/194 (11%) |
GOS |
Show Blast
|
ZP_05030991.1 |
pyruvate formate-lyase 1-activating enzyme [Microcoleus chthonoplastes PCC 7420]
Evalue: 3e-31 | Bitscore: 140 Identities = 88/252 (34%), Positives = 142/252 (56%), Gaps = 14/252 (5%) |
NCBI |
Show Blast
|
YP_473956.1 |
pyruvate formate-lyase activating enzyme [Synechococcus sp. JA-3-3Ab]
Evalue: 9e-31 | Bitscore: 138 Identities = 94/258 (36%), Positives = 137/258 (53%), Gaps = 21/258 (8%) |
NCBI |
Show Blast
|
YP_001514811.1 |
pyruvate formate-lyase activating enzyme [Acaryochloris marina MBIC11017]
Evalue: 2e-30 | Bitscore: 137 Identities = 90/258 (34%), Positives = 146/258 (56%), Gaps = 20/258 (7%) |
NCBI |
Show Blast
|
ZP_02033230.1 |
hypothetical protein PARMER_03254 [Parabacteroides merdae ATCC 43184]
Evalue: 4e-30 | Bitscore: 136 Identities = 91/257 (35%), Positives = 139/257 (54%), Gaps = 20/257 (7%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
EAC70877.1 |
unknown [environmental sequence]
Evalue: 2e-41 | Bitscore: 169 Identities = 88/206 (42%), Positives = 118/206 (57%), Gaps = 3/206 (1%) |
GOS |
Show Blast
|
EAD67716.1 |
unknown [environmental sequence]
Evalue: 2e-34 | Bitscore: 145 Identities = 85/194 (43%), Positives = 106/194 (54%), Gaps = 23/194 (11%) |
GOS |
Show Blast
|
EAK68529.1 |
unknown [environmental sequence]
Evalue: 2e-28 | Bitscore: 126 Identities = 84/268 (31%), Positives = 129/268 (48%), Gaps = 34/268 (12%) |
GOS |
Show Blast
|
EAJ33077.1 |
unknown [environmental sequence]
Evalue: 2e-27 | Bitscore: 123 Identities = 82/268 (30%), Positives = 128/268 (47%), Gaps = 34/268 (12%) |
GOS |
Show Blast
|
EAG39612.1 |
unknown [environmental sequence]
Evalue: 8e-27 | Bitscore: 120 Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 34/263 (12%) |
GOS |
Show Blast
|
EAI61610.1 |
unknown [environmental sequence]
Evalue: 3e-24 | Bitscore: 112 Identities = 78/255 (30%), Positives = 122/255 (47%), Gaps = 24/255 (9%) |
GOS |
Show Blast
|
EAG35923.1 |
unknown [environmental sequence]
Evalue: 7e-24 | Bitscore: 111 Identities = 75/245 (30%), Positives = 117/245 (47%), Gaps = 28/245 (11%) |
GOS |
Show Blast
|
EAG55768.1 |
unknown [environmental sequence]
Evalue: 4e-23 | Bitscore: 108 Identities = 77/254 (30%), Positives = 118/254 (46%), Gaps = 34/254 (13%) |
GOS |
Show Blast
|
EAG52024.1 |
unknown [environmental sequence]
Evalue: 0.0002 | Bitscore: 46 Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 17/94 (18%) |
GOS |
Show Blast
|
EAH13416.1 |
unknown [environmental sequence]
Evalue: 0.0005 | Bitscore: 45 Identities = 16/43 (37%), Positives = 26/43 (60%) |
GOS |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
CAL52533.1 |
putative pyruvate-formatelyase activating enzyme (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 672 Identities = 382/382 (100%), Positives = 382/382 (100%), Gaps = 0/382 (0%) |
NCBI |
Show Blast
|
XP_001416074.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 9e-81 | Bitscore: 305 Identities = 163/265 (61%), Positives = 202/265 (76%), Gaps = 6/265 (2%) |
NCBI |
Show Blast
|
XP_002500323.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 6e-51 | Bitscore: 205 Identities = 134/274 (48%), Positives = 171/274 (62%), Gaps = 27/274 (9%) |
NCBI |
Show Blast
|
EEH51095.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 2e-48 | Bitscore: 197 Identities = 132/261 (50%), Positives = 164/261 (62%), Gaps = 15/261 (5%) |
NCBI |
Show Blast
|
ZP_05030991.1 |
pyruvate formate-lyase 1-activating enzyme [Microcoleus chthonoplastes PCC 7420]
Evalue: 3e-31 | Bitscore: 140 Identities = 88/252 (34%), Positives = 142/252 (56%), Gaps = 14/252 (5%) |
NCBI |
Show Blast
|
YP_473956.1 |
pyruvate formate-lyase activating enzyme [Synechococcus sp. JA-3-3Ab]
Evalue: 9e-31 | Bitscore: 138 Identities = 94/258 (36%), Positives = 137/258 (53%), Gaps = 21/258 (8%) |
NCBI |
Show Blast
|
YP_001514811.1 |
pyruvate formate-lyase activating enzyme [Acaryochloris marina MBIC11017]
Evalue: 2e-30 | Bitscore: 137 Identities = 90/258 (34%), Positives = 146/258 (56%), Gaps = 20/258 (7%) |
NCBI |
Show Blast
|
ZP_02033230.1 |
hypothetical protein PARMER_03254 [Parabacteroides merdae ATCC 43184]
Evalue: 4e-30 | Bitscore: 136 Identities = 91/257 (35%), Positives = 139/257 (54%), Gaps = 20/257 (7%) |
NCBI |
Show Blast
|
YP_003013948.1 |
pyruvate formate-lyase activating enzyme [Paenibacillus sp. JDR-2]
Evalue: 2e-29 | Bitscore: 134 Identities = 93/251 (37%), Positives = 138/251 (54%), Gaps = 15/251 (5%) |
NCBI |
Show Blast
|
YP_476504.1 |
pyruvate formate-lyase activating enzyme [Synechococcus sp. JA-2-3B'a(2-13)]
Evalue: 4e-29 | Bitscore: 133 Identities = 87/258 (33%), Positives = 134/258 (51%), Gaps = 22/258 (8%) |
NCBI |
Show Blast
|
No hits found against database O.RCC809 with an e-value better than 1e-3. |
No hits found against database O.luci with an e-value better than 1e-3. |
No hits found against database Self with an e-value better than 1e-3. |
ProteinID | Description / BlastScore | Database | Actions |
Q46267 |
Pyruvate formate-lyase-activating enzyme OS=Clostridium pasteurianum GN=act PE=3 SV=1
Evalue: 2e-28 | Bitscore: 126 Identities = 80/232 (34%), Positives = 116/232 (50%), Gaps = 21/232 (9%) |
SwissP |
Show Blast
|
P0A9N6 |
Pyruvate formate-lyase 1-activating enzyme OS=Escherichia coli O157:H7 GN=pflA PE=3 SV=2
Evalue: 9e-26 | Bitscore: 118 Identities = 77/265 (29%), Positives = 128/265 (48%), Gaps = 28/265 (10%) |
SwissP |
Show Blast
|
P0A9N7 |
Pyruvate formate-lyase 1-activating enzyme OS=Shigella flexneri GN=pflA PE=3 SV=2
Evalue: 9e-26 | Bitscore: 118 Identities = 77/265 (29%), Positives = 128/265 (48%), Gaps = 28/265 (10%) |
SwissP |
Show Blast
|
P0A9N4 |
Pyruvate formate-lyase 1-activating enzyme OS=Escherichia coli (strain K12) GN=pflA PE=1 SV=2
Evalue: 9e-26 | Bitscore: 118 Identities = 77/265 (29%), Positives = 128/265 (48%), Gaps = 28/265 (10%) |
SwissP |
Show Blast
|
P0A9N5 |
Pyruvate formate-lyase 1-activating enzyme OS=Escherichia coli O6 GN=pflA PE=3 SV=2
Evalue: 9e-26 | Bitscore: 118 Identities = 77/265 (29%), Positives = 128/265 (48%), Gaps = 28/265 (10%) |
SwissP |
Show Blast
|
Q6GCP9 |
Pyruvate formate-lyase-activating enzyme OS=Staphylococcus aureus (strain MSSA476) GN=pflA PE=3 SV=1
Evalue: 4e-22 | Bitscore: 105 Identities = 78/258 (30%), Positives = 126/258 (48%), Gaps = 25/258 (9%) |
SwissP |
Show Blast
|
Q7A7X5 |
Pyruvate formate-lyase-activating enzyme OS=Staphylococcus aureus (strain N315) GN=pflA PE=1 SV=1
Evalue: 4e-22 | Bitscore: 105 Identities = 78/258 (30%), Positives = 126/258 (48%), Gaps = 25/258 (9%) |
SwissP |
Show Blast
|
Q6GK89 |
Pyruvate formate-lyase-activating enzyme OS=Staphylococcus aureus (strain MRSA252) GN=pflA PE=3 SV=1
Evalue: 4e-22 | Bitscore: 105 Identities = 78/258 (30%), Positives = 126/258 (48%), Gaps = 25/258 (9%) |
SwissP |
Show Blast
|
Q99WZ6 |
Pyruvate formate-lyase-activating enzyme OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pflA PE=3 SV=1
Evalue: 4e-22 | Bitscore: 105 Identities = 78/258 (30%), Positives = 126/258 (48%), Gaps = 25/258 (9%) |
SwissP |
Show Blast
|
Q7A1W8 |
Pyruvate formate-lyase-activating enzyme OS=Staphylococcus aureus (strain MW2) GN=pflA PE=3 SV=1
Evalue: 4e-22 | Bitscore: 105 Identities = 78/258 (30%), Positives = 126/258 (48%), Gaps = 25/258 (9%) |
SwissP |
Show Blast
|
No hits found against database Tair with an e-value better than 1e-3. |
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|