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Ostreococcus tauri


Gene ID
Ot02g06580
Locus
Ot02g06580
Functional Description
putative pyruvate-formatelyase activating enzyme (ISS)
Gene Type
protein-coding gene
Contig
chrom02
Last Modified On
08 March 2010 22h00
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
putative pyruvate-formatelyase activating enzyme (ISS)
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
1.
iron ion binding

2.
oxidoreductase activity

3.
4 iron, 4 sulfur cluster binding

Biological Process
1.
obsolete oxygen and reactive oxygen species metabolic process

2.
obsolete oxidation-reduction process

Protein Domains 


Domain IDDescriptionDatabase
SSF102114 Radical SAM enzymes superfamily
IPR007197 Radical SAM InterPro
IPR001989 Radical-activating enzyme, conserved site InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
CAL52533.1 putative pyruvate-formatelyase activating enzyme (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 672
Identities = 382/382 (100%), Positives = 382/382 (100%), Gaps = 0/382 (0%)
NCBI
Show Blast
XP_001416074.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 9e-81 | Bitscore: 305
Identities = 163/265 (61%), Positives = 202/265 (76%), Gaps = 6/265 (2%)
NCBI
Show Blast
XP_002500323.1 predicted protein [Micromonas sp. RCC299]
Evalue: 6e-51 | Bitscore: 205
Identities = 134/274 (48%), Positives = 171/274 (62%), Gaps = 27/274 (9%)
NCBI
Show Blast
EEH51095.1 predicted protein [Micromonas pusilla CCMP1545]
Evalue: 2e-48 | Bitscore: 197
Identities = 132/261 (50%), Positives = 164/261 (62%), Gaps = 15/261 (5%)
NCBI
Show Blast
EAC70877.1 unknown [environmental sequence]
Evalue: 2e-41 | Bitscore: 169
Identities = 88/206 (42%), Positives = 118/206 (57%), Gaps = 3/206 (1%)
GOS
Show Blast
EAD67716.1 unknown [environmental sequence]
Evalue: 2e-34 | Bitscore: 145
Identities = 85/194 (43%), Positives = 106/194 (54%), Gaps = 23/194 (11%)
GOS
Show Blast
ZP_05030991.1 pyruvate formate-lyase 1-activating enzyme [Microcoleus chthonoplastes PCC 7420]
Evalue: 3e-31 | Bitscore: 140
Identities = 88/252 (34%), Positives = 142/252 (56%), Gaps = 14/252 (5%)
NCBI
Show Blast
YP_473956.1 pyruvate formate-lyase activating enzyme [Synechococcus sp. JA-3-3Ab]
Evalue: 9e-31 | Bitscore: 138
Identities = 94/258 (36%), Positives = 137/258 (53%), Gaps = 21/258 (8%)
NCBI
Show Blast
YP_001514811.1 pyruvate formate-lyase activating enzyme [Acaryochloris marina MBIC11017]
Evalue: 2e-30 | Bitscore: 137
Identities = 90/258 (34%), Positives = 146/258 (56%), Gaps = 20/258 (7%)
NCBI
Show Blast
ZP_02033230.1 hypothetical protein PARMER_03254 [Parabacteroides merdae ATCC 43184]
Evalue: 4e-30 | Bitscore: 136
Identities = 91/257 (35%), Positives = 139/257 (54%), Gaps = 20/257 (7%)
NCBI
Show Blast

Gene Structure 

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Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

CDS  

Locus ID
OT02G06580
Redo Blast
CDS Length
1149 nucleotides
CDS Sequence

Protein 

Locus ID
OT02G06580
Redo Blast
Protein Length
296 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a