- Gene ID
- Ot02g01210
- Locus
- Ot02g01210
- Functional Description
- Animal-type fatty acid synthase and related proteins (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom02
- Last Modified On
- 08 March 2010 20h54
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- Animal-type fatty acid synthase and related proteins (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
oxidoreductase activity
- Biological Process
-
1.
metabolic process
Protein Domains
| Domain ID | Description | Database |
|---|
|
IPR006163 |
Phosphopantetheine-binding |
InterPro |
|
G3DSA:1.10.1200.10 |
no description |
Gene3D |
|
IPR016038 |
Thiolase-like, subgroup |
InterPro |
|
IPR011032 |
GroES-like |
InterPro |
|
IPR001333 |
Peptidase M32, carboxypeptidase Taq metallopeptidase |
InterPro |
|
SSF52540 |
P-loop containing nucleoside triphosphate hydrolases |
superfamily |
|
SSF55486 |
Metalloproteases ("zincins"), catalytic domain |
superfamily |
|
IPR013968 |
Polyketide synthase, KR |
InterPro |
|
SSF56801 |
Acetyl-CoA synthetase-like |
superfamily |
|
IPR000794 |
Beta-ketoacyl synthase |
InterPro |
|
IPR014031 |
Beta-ketoacyl synthase, C-terminal |
InterPro |
|
IPR014030 |
Beta-ketoacyl synthase, N-terminal |
InterPro |
|
IPR006162 |
Phosphopantetheine attachment site |
InterPro |
|
G3DSA:3.90.180.10 |
no description |
Gene3D |
|
IPR018201 |
Beta-ketoacyl synthase, active site |
InterPro |
|
SSF52777 |
CoA-dependent acyltransferases |
superfamily |
|
IPR016039 |
Thiolase-like |
InterPro |
|
IPR016040 |
NAD(P)-binding domain |
InterPro |
|
IPR009081 |
Acyl carrier protein-like |
InterPro |
|
IPR008985 |
Concanavalin A-like lectin/glucanase |
InterPro |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot02g01230 |
chrom02.0001 [192036..206291] incomplete
Evalue: 0.0 | Bitscore: 9258
Identities = 4631/4745 (97%), Positives = 4631/4745 (97%) |
Self |
Show Blast
|
| Ot19g00290 |
chrom19.0001 [41145..43778]
Evalue: 1e-153 | Bitscore: 540
Identities = 269/301 (89%), Positives = 275/301 (91%), Gaps = 8/301 (2%) |
Self |
Show Blast
|
| Ot02g00370 |
chrom02.0001 [70861..70973,71008..71135,71169..71179,71222..73765,
Evalue: 1e-140 | Bitscore: 499
Identities = 249/295 (84%), Positives = 260/295 (88%), Gaps = 8/295 (2%) |
Self |
Show Blast
|
| Ot02g00980 |
chrom02.0001 [157588..160518,160577..171758,171799..171857] incomplete
Evalue: 4e-99 | Bitscore: 361
Identities = 293/927 (31%), Positives = 448/927 (48%), Gaps = 87/927 (9%) |
Self |
Show Blast
|
| Ot02g07060 |
chrom02.0001 [936749..938063,938095..943785,943862..951132] incomplete
Evalue: 1e-93 | Bitscore: 343
Identities = 440/1673 (26%), Positives = 712/1673 (42%), Gaps = 237/1673 (14%) |
Self |
Show Blast
|
| Ot02g00220 |
chrom02.0001 [30511..30777,30821..33922,33963..45102,45159..45175]
Evalue: 8e-91 | Bitscore: 333
Identities = 299/971 (30%), Positives = 432/971 (44%), Gaps = 129/971 (13%) |
Self |
Show Blast
|
| Ot02g06640 |
chrom02.0001 [849570..849583,849672..868326] incomplete
Evalue: 7e-84 | Bitscore: 310
Identities = 247/792 (31%), Positives = 376/792 (47%), Gaps = 80/792 (10%) |
Self |
Show Blast
|
| Ot02g00240 |
chrom02.0001 [45740..45752,45790..46751,46787..46900,46974..47360, 47404..50102,50135..50432,50489..52933] inframe stop
Evalue: 1e-78 | Bitscore: 293
Identities = 250/805 (31%), Positives = 379/805 (47%), Gaps = 96/805 (11%) |
Self |
Show Blast
|
| EAJ13287.1 |
unknown [environmental sequence]
Evalue: 2e-74 | Bitscore: 284
Identities = 261/870 (30%), Positives = 403/870 (46%), Gaps = 104/870 (11%) |
GOS |
Show Blast
|
| Ot02g01420 |
chrom02.0001 [214175..214212,214249..214518,214597..214693, 214751..214756] incomplete
Evalue: 3e-67 | Bitscore: 255
Identities = 134/173 (77%), Positives = 134/173 (77%), Gaps = 38/173 (21%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EAJ13287.1 |
unknown [environmental sequence]
Evalue: 2e-74 | Bitscore: 284
Identities = 261/870 (30%), Positives = 403/870 (46%), Gaps = 104/870 (11%) |
GOS |
Show Blast
|
| EAI17918.1 |
unknown [environmental sequence]
Evalue: 6e-58 | Bitscore: 229
Identities = 147/357 (41%), Positives = 195/357 (54%), Gaps = 17/357 (4%) |
GOS |
Show Blast
|
| EAJ13285.1 |
unknown [environmental sequence]
Evalue: 4e-57 | Bitscore: 226
Identities = 179/520 (34%), Positives = 244/520 (46%), Gaps = 51/520 (9%) |
GOS |
Show Blast
|
| EAK44774.1 |
unknown [environmental sequence]
Evalue: 7e-47 | Bitscore: 192
Identities = 129/331 (38%), Positives = 179/331 (54%), Gaps = 32/331 (9%) |
GOS |
Show Blast
|
| EAI16915.1 |
unknown [environmental sequence]
Evalue: 6e-45 | Bitscore: 186
Identities = 112/298 (37%), Positives = 162/298 (54%), Gaps = 27/298 (9%) |
GOS |
Show Blast
|
| EAD76899.1 |
unknown [environmental sequence]
Evalue: 1e-42 | Bitscore: 178
Identities = 108/237 (45%), Positives = 140/237 (59%), Gaps = 8/237 (3%) |
GOS |
Show Blast
|
| EAK32372.1 |
unknown [environmental sequence]
Evalue: 2e-42 | Bitscore: 177
Identities = 136/406 (33%), Positives = 193/406 (47%), Gaps = 33/406 (8%) |
GOS |
Show Blast
|
| EAB69043.1 |
unknown [environmental sequence]
Evalue: 5e-41 | Bitscore: 172
Identities = 118/296 (39%), Positives = 159/296 (53%), Gaps = 23/296 (7%) |
GOS |
Show Blast
|
| EAG56899.1 |
unknown [environmental sequence]
Evalue: 6e-40 | Bitscore: 169
Identities = 112/272 (41%), Positives = 152/272 (55%), Gaps = 14/272 (5%) |
GOS |
Show Blast
|
| EAB42805.1 |
unknown [environmental sequence]
Evalue: 7e-37 | Bitscore: 159
Identities = 108/286 (37%), Positives = 154/286 (53%), Gaps = 19/286 (6%) |
GOS |
Show Blast
|
| No hits found against database NCBI with an e-value better than 1e-3. |
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Ot02g01230 |
chrom02.0001 [192036..206291] incomplete
Evalue: 0.0 | Bitscore: 9258
Identities = 4631/4745 (97%), Positives = 4631/4745 (97%) |
Self |
Show Blast
|
| Ot19g00290 |
chrom19.0001 [41145..43778]
Evalue: 1e-153 | Bitscore: 540
Identities = 269/301 (89%), Positives = 275/301 (91%), Gaps = 8/301 (2%) |
Self |
Show Blast
|
| Ot02g00370 |
chrom02.0001 [70861..70973,71008..71135,71169..71179,71222..73765,
Evalue: 1e-140 | Bitscore: 499
Identities = 249/295 (84%), Positives = 260/295 (88%), Gaps = 8/295 (2%) |
Self |
Show Blast
|
| Ot02g00980 |
chrom02.0001 [157588..160518,160577..171758,171799..171857] incomplete
Evalue: 4e-99 | Bitscore: 361
Identities = 293/927 (31%), Positives = 448/927 (48%), Gaps = 87/927 (9%) |
Self |
Show Blast
|
| Ot02g07060 |
chrom02.0001 [936749..938063,938095..943785,943862..951132] incomplete
Evalue: 1e-93 | Bitscore: 343
Identities = 440/1673 (26%), Positives = 712/1673 (42%), Gaps = 237/1673 (14%) |
Self |
Show Blast
|
| Ot02g00220 |
chrom02.0001 [30511..30777,30821..33922,33963..45102,45159..45175]
Evalue: 8e-91 | Bitscore: 333
Identities = 299/971 (30%), Positives = 432/971 (44%), Gaps = 129/971 (13%) |
Self |
Show Blast
|
| Ot02g06640 |
chrom02.0001 [849570..849583,849672..868326] incomplete
Evalue: 7e-84 | Bitscore: 310
Identities = 247/792 (31%), Positives = 376/792 (47%), Gaps = 80/792 (10%) |
Self |
Show Blast
|
| Ot02g00240 |
chrom02.0001 [45740..45752,45790..46751,46787..46900,46974..47360, 47404..50102,50135..50432,50489..52933] inframe stop
Evalue: 1e-78 | Bitscore: 293
Identities = 250/805 (31%), Positives = 379/805 (47%), Gaps = 96/805 (11%) |
Self |
Show Blast
|
| Ot02g01420 |
chrom02.0001 [214175..214212,214249..214518,214597..214693, 214751..214756] incomplete
Evalue: 3e-67 | Bitscore: 255
Identities = 134/173 (77%), Positives = 134/173 (77%), Gaps = 38/173 (21%) |
Self |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q03132 |
Erythronolide synthase, modules 3 and 4 OS=Saccharopolyspora erythraea GN=eryA PE=1 SV=3
Evalue: 1e-56 | Bitscore: 225
Identities = 203/695 (29%), Positives = 301/695 (43%), Gaps = 81/695 (11%) |
SwissP |
Show Blast
|
| O31782 |
Polyketide synthase pksN OS=Bacillus subtilis GN=pksN PE=1 SV=3
Evalue: 2e-54 | Bitscore: 218
Identities = 229/868 (26%), Positives = 370/868 (42%), Gaps = 130/868 (14%) |
SwissP |
Show Blast
|
| Q03131 |
Erythronolide synthase, modules 1 and 2 OS=Saccharopolyspora erythraea GN=eryA PE=1 SV=1
Evalue: 4e-53 | Bitscore: 214
Identities = 228/816 (27%), Positives = 347/816 (42%), Gaps = 100/816 (12%) |
SwissP |
Show Blast
|
| Q03133 |
Erythronolide synthase, modules 5 and 6 OS=Saccharopolyspora erythraea GN=eryA PE=1 SV=4
Evalue: 2e-52 | Bitscore: 211
Identities = 231/838 (27%), Positives = 354/838 (42%), Gaps = 106/838 (12%) |
SwissP |
Show Blast
|
| Q10977 |
Phenolpthiocerol synthesis polyketide synthase ppsA OS=Mycobacterium tuberculosis GN=ppsA PE=3 SV=2
Evalue: 7e-50 | Bitscore: 203
Identities = 158/509 (31%), Positives = 241/509 (47%), Gaps = 52/509 (10%) |
SwissP |
Show Blast
|
| Q05470 |
Polyketide synthase pksL OS=Bacillus subtilis GN=pksL PE=1 SV=3
Evalue: 3e-48 | Bitscore: 197
Identities = 204/813 (25%), Positives = 352/813 (43%), Gaps = 116/813 (14%) |
SwissP |
Show Blast
|
| Q07017 |
Oleandomycin polyketide synthase, modules 5 and 6 OS=Streptomyces antibioticus GN=orfB PE=3 SV=1
Evalue: 1e-46 | Bitscore: 192
Identities = 141/412 (34%), Positives = 201/412 (48%), Gaps = 37/412 (8%) |
SwissP |
Show Blast
|
| Q10978 |
Phenolpthiocerol synthesis polyketide synthase ppsB OS=Mycobacterium tuberculosis GN=ppsB PE=3 SV=2
Evalue: 1e-46 | Bitscore: 192
Identities = 146/405 (36%), Positives = 205/405 (50%), Gaps = 31/405 (7%) |
SwissP |
Show Blast
|
| O07798 |
Phthioceranic/hydroxyphthioceranic acid synthase OS=Mycobacterium tuberculosis GN=pks2 PE=1 SV=1
Evalue: 1e-45 | Bitscore: 189
Identities = 126/405 (31%), Positives = 194/405 (47%), Gaps = 30/405 (7%) |
SwissP |
Show Blast
|
| A1KQG0 |
Phthioceranic/hydroxyphthioceranic acid synthase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=pks2 PE=3 SV=1
Evalue: 1e-45 | Bitscore: 189
Identities = 126/405 (31%), Positives = 194/405 (47%), Gaps = 30/405 (7%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT5G46290.1 |
| Symbols: KAS I | KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I); fatty-acid synthase | chr5:18791666-18793856 REVERSE
Evalue: 5e-15 | Bitscore: 84
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 16/249 (6%) |
Tair |
Show Blast
|
| AT2G04540.1 |
| Symbols: | 3-oxoacyl-(acyl-carrier-protein) synthase II, putative | chr2:1581518-1584632 REVERSE
Evalue: 8e-09 | Bitscore: 63
Identities = 70/249 (28%), Positives = 107/249 (42%), Gaps = 27/249 (10%) |
Tair |
Show Blast
|
| AT1G74960.2 |
| Symbols: KAS2, FAB1 | FAB1 (FATTY ACID BIOSYNTHESIS 1); fatty-acid synthase | chr1:28156225-28159609 REVERSE
Evalue: 4e-07 | Bitscore: 58
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 24/215 (11%) |
Tair |
Show Blast
|
| AT1G74960.1 |
| Symbols: KAS2, FAB1 | FAB1 (FATTY ACID BIOSYNTHESIS 1); fatty-acid synthase | chr1:28156225-28159609 REVERSE
Evalue: 4e-07 | Bitscore: 58
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 24/215 (11%) |
Tair |
Show Blast
|
| AT5G46290.2 |
| Symbols: KAS I | KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I); fatty-acid synthase | chr5:18791666-18793856 REVERSE
Evalue: 9e-07 | Bitscore: 56
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 11/176 (6%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
| EST ID | CH1_PKS2 |
Support Model | Y |
More Info |
| Mapping Location | 189151..192018 |
Strand - |
| EST ID | OtEST00414 |
Support Model | Y |
More Info |
| Mapping Location | 216924..217408 |
Strand - |
|
