- Gene ID
- Ot02g00980
- Locus
- Ot02g00980
- Functional Description
- type I fatty acid synthase (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom02
- Last Modified On
- 08 March 2010 20h51
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- type I fatty acid synthase (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
XP_001416378.1 |
polyketide synthase [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 1209 Identities = 775/1819 (42%), Positives = 1070/1819 (58%), Gaps = 93/1819 (5%) |
NCBI |
Show Blast
|
CAL52081.1 |
unnamed protein product [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 650 Identities = 298/313 (95%), Positives = 304/313 (97%), Gaps = 3/313 (0%) |
NCBI |
Show Blast
|
XP_002507643.1 |
modular polyketide synthase type I [Micromonas sp. RCC299]
Evalue: 7e-97 | Bitscore: 362 Identities = 297/838 (35%), Positives = 412/838 (49%), Gaps = 96/838 (11%) |
NCBI |
Show Blast
|
Ot02g01230 |
chrom02.0001 [192036..206291] incomplete
Evalue: 3e-97 | Bitscore: 354 Identities = 287/910 (31%), Positives = 435/910 (47%), Gaps = 86/910 (9%) |
Self |
Show Blast
|
CAL52581.1 |
type I fatty acid synthase (ISS) [Ostreococcus tauri]
Evalue: 2e-94 | Bitscore: 354 Identities = 272/821 (33%), Positives = 401/821 (48%), Gaps = 102/821 (12%) |
NCBI |
Show Blast
|
CAL52090.2 |
COG3321: Polyketide synthase modules and related proteins (ISS) [Ostreococcus tauri]
Evalue: 2e-94 | Bitscore: 354 Identities = 288/910 (31%), Positives = 440/910 (48%), Gaps = 86/910 (9%) |
NCBI |
Show Blast
|
Ot02g07060 |
chrom02.0001 [936749..938063,938095..943785,943862..951132] incomplete
Evalue: 1e-95 | Bitscore: 348 Identities = 268/817 (32%), Positives = 406/817 (49%), Gaps = 77/817 (9%) |
Self |
Show Blast
|
XP_001416048.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 1e-86 | Bitscore: 328 Identities = 287/932 (30%), Positives = 435/932 (46%), Gaps = 82/932 (8%) |
NCBI |
Show Blast
|
XP_626786.1 |
type I fatty acid synthase [Cryptosporidium parvum Iowa II]
Evalue: 2e-86 | Bitscore: 328 Identities = 233/703 (33%), Positives = 349/703 (49%), Gaps = 66/703 (9%) |
NCBI |
Show Blast
|
AAC99407.1 |
type I fatty acid synthase [Cryptosporidium parvum]
Evalue: 9e-86 | Bitscore: 325 Identities = 231/703 (32%), Positives = 347/703 (49%), Gaps = 66/703 (9%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
EAJ13285.1 |
unknown [environmental sequence]
Evalue: 2e-70 | Bitscore: 269 Identities = 200/575 (34%), Positives = 281/575 (48%), Gaps = 50/575 (8%) |
GOS |
Show Blast
|
EAJ13287.1 |
unknown [environmental sequence]
Evalue: 1e-66 | Bitscore: 256 Identities = 224/758 (29%), Positives = 349/758 (46%), Gaps = 92/758 (12%) |
GOS |
Show Blast
|
EAI17918.1 |
unknown [environmental sequence]
Evalue: 1e-53 | Bitscore: 214 Identities = 135/316 (42%), Positives = 177/316 (56%), Gaps = 16/316 (5%) |
GOS |
Show Blast
|
EAK32372.1 |
unknown [environmental sequence]
Evalue: 9e-53 | Bitscore: 211 Identities = 133/372 (35%), Positives = 195/372 (52%), Gaps = 27/372 (7%) |
GOS |
Show Blast
|
EAI16915.1 |
unknown [environmental sequence]
Evalue: 4e-50 | Bitscore: 202 Identities = 121/312 (38%), Positives = 169/312 (54%), Gaps = 24/312 (7%) |
GOS |
Show Blast
|
EAG56899.1 |
unknown [environmental sequence]
Evalue: 3e-49 | Bitscore: 199 Identities = 112/270 (41%), Positives = 157/270 (58%), Gaps = 17/270 (6%) |
GOS |
Show Blast
|
EAD53399.1 |
unknown [environmental sequence]
Evalue: 2e-45 | Bitscore: 186 Identities = 118/274 (43%), Positives = 159/274 (58%), Gaps = 20/274 (7%) |
GOS |
Show Blast
|
EAB69043.1 |
unknown [environmental sequence]
Evalue: 2e-42 | Bitscore: 177 Identities = 115/292 (39%), Positives = 164/292 (56%), Gaps = 27/292 (9%) |
GOS |
Show Blast
|
EAF25669.1 |
unknown [environmental sequence]
Evalue: 2e-42 | Bitscore: 176 Identities = 107/250 (42%), Positives = 146/250 (58%), Gaps = 13/250 (5%) |
GOS |
Show Blast
|
EAD76899.1 |
unknown [environmental sequence]
Evalue: 8e-40 | Bitscore: 168 Identities = 107/244 (43%), Positives = 139/244 (56%), Gaps = 24/244 (9%) |
GOS |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
XP_001416378.1 |
polyketide synthase [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 1209 Identities = 775/1819 (42%), Positives = 1070/1819 (58%), Gaps = 93/1819 (5%) |
NCBI |
Show Blast
|
CAL52081.1 |
unnamed protein product [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 650 Identities = 298/313 (95%), Positives = 304/313 (97%), Gaps = 3/313 (0%) |
NCBI |
Show Blast
|
XP_002507643.1 |
modular polyketide synthase type I [Micromonas sp. RCC299]
Evalue: 7e-97 | Bitscore: 362 Identities = 297/838 (35%), Positives = 412/838 (49%), Gaps = 96/838 (11%) |
NCBI |
Show Blast
|
CAL52581.1 |
type I fatty acid synthase (ISS) [Ostreococcus tauri]
Evalue: 2e-94 | Bitscore: 354 Identities = 272/821 (33%), Positives = 401/821 (48%), Gaps = 102/821 (12%) |
NCBI |
Show Blast
|
CAL52090.2 |
COG3321: Polyketide synthase modules and related proteins (ISS) [Ostreococcus tauri]
Evalue: 2e-94 | Bitscore: 354 Identities = 288/910 (31%), Positives = 440/910 (48%), Gaps = 86/910 (9%) |
NCBI |
Show Blast
|
XP_001416048.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 1e-86 | Bitscore: 328 Identities = 287/932 (30%), Positives = 435/932 (46%), Gaps = 82/932 (8%) |
NCBI |
Show Blast
|
XP_626786.1 |
type I fatty acid synthase [Cryptosporidium parvum Iowa II]
Evalue: 2e-86 | Bitscore: 328 Identities = 233/703 (33%), Positives = 349/703 (49%), Gaps = 66/703 (9%) |
NCBI |
Show Blast
|
AAC99407.1 |
type I fatty acid synthase [Cryptosporidium parvum]
Evalue: 9e-86 | Bitscore: 325 Identities = 231/703 (32%), Positives = 347/703 (49%), Gaps = 66/703 (9%) |
NCBI |
Show Blast
|
XP_667412.1 |
hypothetical protein [Cryptosporidium hominis TU502]
Evalue: 2e-84 | Bitscore: 321 Identities = 227/692 (32%), Positives = 342/692 (49%), Gaps = 62/692 (8%) |
NCBI |
Show Blast
|
CAL52077.1 |
type I fatty acid synthase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1 Identities = 5846/5846 (100%), Positives = 5846/5846 (100%), Gaps = 0/5846 (0%) |
NCBI |
Show Blast
|
No hits found against database O.RCC809 with an e-value better than 1e-3. |
No hits found against database O.luci with an e-value better than 1e-3. |
ProteinID | Description / BlastScore | Database | Actions |
Ot02g01230 |
chrom02.0001 [192036..206291] incomplete
Evalue: 3e-97 | Bitscore: 354 Identities = 287/910 (31%), Positives = 435/910 (47%), Gaps = 86/910 (9%) |
Self |
Show Blast
|
Ot02g07060 |
chrom02.0001 [936749..938063,938095..943785,943862..951132] incomplete
Evalue: 1e-95 | Bitscore: 348 Identities = 268/817 (32%), Positives = 406/817 (49%), Gaps = 77/817 (9%) |
Self |
Show Blast
|
Ot02g01030 |
chrom02.0001 [174084..174183,174247..174337,174377..174424,
Evalue: 6e-83 | Bitscore: 306 Identities = 176/297 (59%), Positives = 177/297 (59%), Gaps = 119/297 (40%) |
Self |
Show Blast
|
Ot02g00220 |
chrom02.0001 [30511..30777,30821..33922,33963..45102,45159..45175]
Evalue: 1e-80 | Bitscore: 299 Identities = 282/945 (29%), Positives = 400/945 (42%), Gaps = 160/945 (16%) |
Self |
Show Blast
|
Ot02g06640 |
chrom02.0001 [849570..849583,849672..868326] incomplete
Evalue: 4e-80 | Bitscore: 297 Identities = 241/787 (30%), Positives = 358/787 (45%), Gaps = 71/787 (9%) |
Self |
Show Blast
|
Ot02g00990 |
chrom02.0001 [171918..171963,172042..172096,172151..172208, 172248..172337,172374..172481,172548..172593,
Evalue: 1e-78 | Bitscore: 292 Identities = 196/361 (54%), Positives = 199/361 (55%), Gaps = 149/361 (41%) |
Self |
Show Blast
|
Ot02g00240 |
chrom02.0001 [45740..45752,45790..46751,46787..46900,46974..47360, 47404..50102,50135..50432,50489..52933] inframe stop
Evalue: 4e-67 | Bitscore: 254 Identities = 221/728 (30%), Positives = 329/728 (45%), Gaps = 97/728 (13%) |
Self |
Show Blast
|
Ot10g02270 |
chrom10.0001 [369662..372116,372155..372217,372253..372971]
Evalue: 2e-42 | Bitscore: 172 Identities = 112/268 (41%), Positives = 148/268 (55%), Gaps = 37/268 (13%) |
Self |
Show Blast
|
Ot15g01850 |
chrom15.0001 [303592..304437] incomplete
Evalue: 2e-37 | Bitscore: 155 Identities = 108/269 (40%), Positives = 142/269 (52%), Gaps = 20/269 (7%) |
Self |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
Q03132 |
Erythronolide synthase, modules 3 and 4 OS=Saccharopolyspora erythraea GN=eryA PE=1 SV=3
Evalue: 2e-66 | Bitscore: 257 Identities = 227/777 (29%), Positives = 349/777 (44%), Gaps = 107/777 (13%) |
SwissP |
Show Blast
|
O31782 |
Polyketide synthase pksN OS=Bacillus subtilis GN=pksN PE=1 SV=3
Evalue: 7e-61 | Bitscore: 239 Identities = 206/784 (26%), Positives = 338/784 (43%), Gaps = 108/784 (13%) |
SwissP |
Show Blast
|
Q03131 |
Erythronolide synthase, modules 1 and 2 OS=Saccharopolyspora erythraea GN=eryA PE=1 SV=1
Evalue: 2e-58 | Bitscore: 231 Identities = 203/680 (29%), Positives = 316/680 (46%), Gaps = 61/680 (8%) |
SwissP |
Show Blast
|
Q10977 |
Phenolpthiocerol synthesis polyketide synthase ppsA OS=Mycobacterium tuberculosis GN=ppsA PE=3 SV=2
Evalue: 2e-57 | Bitscore: 227 Identities = 168/539 (31%), Positives = 257/539 (47%), Gaps = 55/539 (10%) |
SwissP |
Show Blast
|
Q03133 |
Erythronolide synthase, modules 5 and 6 OS=Saccharopolyspora erythraea GN=eryA PE=1 SV=4
Evalue: 5e-57 | Bitscore: 226 Identities = 221/753 (29%), Positives = 345/753 (45%), Gaps = 91/753 (12%) |
SwissP |
Show Blast
|
Q05470 |
Polyketide synthase pksL OS=Bacillus subtilis GN=pksL PE=1 SV=3
Evalue: 4e-53 | Bitscore: 213 Identities = 215/793 (27%), Positives = 321/793 (40%), Gaps = 109/793 (13%) |
SwissP |
Show Blast
|
Q07017 |
Oleandomycin polyketide synthase, modules 5 and 6 OS=Streptomyces antibioticus GN=orfB PE=3 SV=1
Evalue: 2e-50 | Bitscore: 204 Identities = 134/367 (36%), Positives = 184/367 (50%), Gaps = 23/367 (6%) |
SwissP |
Show Blast
|
P40806 |
Polyketide synthase pksJ OS=Bacillus subtilis GN=pksJ PE=1 SV=3
Evalue: 1e-48 | Bitscore: 198 Identities = 133/389 (34%), Positives = 192/389 (49%), Gaps = 36/389 (9%) |
SwissP |
Show Blast
|
Q02251 |
Mycocerosic acid synthase OS=Mycobacterium bovis GN=mas PE=1 SV=2
Evalue: 1e-47 | Bitscore: 195 Identities = 133/370 (35%), Positives = 180/370 (48%), Gaps = 18/370 (4%) |
SwissP |
Show Blast
|
P40872 |
Polyketide synthase pksM OS=Bacillus subtilis GN=pksM PE=1 SV=4
Evalue: 2e-46 | Bitscore: 191 Identities = 145/514 (28%), Positives = 238/514 (46%), Gaps = 41/514 (7%) |
SwissP |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
AT5G46290.1 |
| Symbols: KAS I | KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I); fatty-acid synthase | chr5:18791666-18793856 REVERSE
Evalue: 2e-11 | Bitscore: 70 Identities = 59/228 (25%), Positives = 94/228 (41%), Gaps = 14/228 (6%) |
Tair |
Show Blast
|
AT5G46290.2 |
| Symbols: KAS I | KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I); fatty-acid synthase | chr5:18791666-18793856 REVERSE
Evalue: 1e-05 | Bitscore: 52 Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 9/153 (5%) |
Tair |
Show Blast
|
AT1G74960.2 |
| Symbols: KAS2, FAB1 | FAB1 (FATTY ACID BIOSYNTHESIS 1); fatty-acid synthase | chr1:28156225-28159609 REVERSE
Evalue: 1e-05 | Bitscore: 52 Identities = 50/201 (24%), Positives = 80/201 (39%), Gaps = 11/201 (5%) |
Tair |
Show Blast
|
AT1G74960.1 |
| Symbols: KAS2, FAB1 | FAB1 (FATTY ACID BIOSYNTHESIS 1); fatty-acid synthase | chr1:28156225-28159609 REVERSE
Evalue: 1e-05 | Bitscore: 52 Identities = 50/201 (24%), Positives = 80/201 (39%), Gaps = 11/201 (5%) |
Tair |
Show Blast
|
AT2G04540.1 |
| Symbols: | 3-oxoacyl-(acyl-carrier-protein) synthase II, putative | chr2:1581518-1584632 REVERSE
Evalue: 3e-05 | Bitscore: 50 Identities = 66/286 (23%), Positives = 112/286 (39%), Gaps = 30/286 (10%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
EST ID | CH1_PKS |
Support Model | Y |
More Info |
Mapping Location | 160898..171663 |
Strand - |
EST ID | OtEST01264 |
Support Model | Y |
More Info |
Comment | EST is mapped on the opposite strand of the predicted model |
Mapping Location | 157348..158155 |
Strand + |
|