- Gene ID
- Ot01g02310
- Locus
- Ot01g02310
- Functional Description
- Amino acid transporter protein (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom01
- Last Modified On
- 08 March 2010 19h29
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- Amino acid transporter protein (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
1.
membrane
- Molecular Function
-
n/a
- Biological Process
-
1.
amino acid transport
- Comment
-
Unknown GO IDs: GO:0005279
Protein Domains
| Domain ID | Description | Database |
|---|
|
IPR013057 |
Amino acid transporter, transmembrane |
InterPro |
|
PTHR22950 |
AMINO ACID TRANSPORTER |
HMMPanther |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL50142.1 |
Amino acid transporter protein (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1344
Identities = 820/820 (100%), Positives = 820/820 (100%), Gaps = 0/820 (0%) |
NCBI |
Show Blast
|
| XP_001415816.1 |
AAAP family transporter: amino acid [Ostreococcus lucimarinus CCE9901]
Evalue: 9e-154 | Bitscore: 548
Identities = 360/771 (46%), Positives = 492/771 (63%), Gaps = 62/771 (8%) |
NCBI |
Show Blast
|
| EEH53628.1 |
amino Acid/Auxin permease family [Micromonas pusilla CCMP1545]
Evalue: 5e-15 | Bitscore: 87
Identities = 86/318 (27%), Positives = 124/318 (38%), Gaps = 66/318 (20%) |
NCBI |
Show Blast
|
| XP_001699884.1 |
amino acid transporter [Chlamydomonas reinhardtii]
Evalue: 7e-12 | Bitscore: 77
Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 5/111 (4%) |
NCBI |
Show Blast
|
| NP_001087075.1 |
solute carrier family 38, member 2 [Xenopus laevis]
Evalue: 2e-09 | Bitscore: 69
Identities = 44/171 (25%), Positives = 90/171 (52%), Gaps = 11/171 (6%) |
NCBI |
Show Blast
|
| Q9H2H9 |
Sodium-coupled neutral amino acid transporter 1 OS=Homo sapiens GN=SLC38A1 PE=1 SV=1
Evalue: 1e-10 | Bitscore: 68
Identities = 58/257 (22%), Positives = 113/257 (43%), Gaps = 28/257 (10%) |
SwissP |
Show Blast
|
| Q5XH90 |
Sodium-coupled neutral amino acid transporter 2 OS=Xenopus tropicalis GN=slc38a2 PE=2 SV=1
Evalue: 2e-10 | Bitscore: 68
Identities = 42/180 (23%), Positives = 92/180 (51%), Gaps = 17/180 (9%) |
SwissP |
Show Blast
|
| Q5R443 |
Sodium-coupled neutral amino acid transporter 1 OS=Pongo abelii GN=SLC38A1 PE=2 SV=1
Evalue: 2e-10 | Bitscore: 68
Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 28/257 (10%) |
SwissP |
Show Blast
|
| XP_001344749.1 |
PREDICTED: similar to solute carrier family 38, member 3 [Danio rerio]
Evalue: 5e-09 | Bitscore: 68
Identities = 50/175 (28%), Positives = 93/175 (53%), Gaps = 16/175 (9%) |
NCBI |
Show Blast
|
| A1YG32 |
Sodium-coupled neutral amino acid transporter 2 OS=Pan paniscus GN=SLC38A2 PE=3 SV=1
Evalue: 6e-10 | Bitscore: 67
Identities = 40/167 (23%), Positives = 84/167 (50%), Gaps = 3/167 (1%) |
SwissP |
Show Blast
|
| No hits found against database GOS with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| CAL50142.1 |
Amino acid transporter protein (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1344
Identities = 820/820 (100%), Positives = 820/820 (100%), Gaps = 0/820 (0%) |
NCBI |
Show Blast
|
| XP_001415816.1 |
AAAP family transporter: amino acid [Ostreococcus lucimarinus CCE9901]
Evalue: 9e-154 | Bitscore: 548
Identities = 360/771 (46%), Positives = 492/771 (63%), Gaps = 62/771 (8%) |
NCBI |
Show Blast
|
| EEH53628.1 |
amino Acid/Auxin permease family [Micromonas pusilla CCMP1545]
Evalue: 5e-15 | Bitscore: 87
Identities = 86/318 (27%), Positives = 124/318 (38%), Gaps = 66/318 (20%) |
NCBI |
Show Blast
|
| XP_001699884.1 |
amino acid transporter [Chlamydomonas reinhardtii]
Evalue: 7e-12 | Bitscore: 77
Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 5/111 (4%) |
NCBI |
Show Blast
|
| NP_001087075.1 |
solute carrier family 38, member 2 [Xenopus laevis]
Evalue: 2e-09 | Bitscore: 69
Identities = 44/171 (25%), Positives = 90/171 (52%), Gaps = 11/171 (6%) |
NCBI |
Show Blast
|
| XP_001344749.1 |
PREDICTED: similar to solute carrier family 38, member 3 [Danio rerio]
Evalue: 5e-09 | Bitscore: 68
Identities = 50/175 (28%), Positives = 93/175 (53%), Gaps = 16/175 (9%) |
NCBI |
Show Blast
|
| XP_416048.2 |
PREDICTED: similar to amino acid transporter system A1 [Gallus gallus]
Evalue: 1e-08 | Bitscore: 66
Identities = 44/167 (26%), Positives = 87/167 (52%), Gaps = 6/167 (3%) |
NCBI |
Show Blast
|
| CAX14309.1 |
novel protein similar to H.sapiens SLC38A3, solute carrier family 38, member 3 (SLC38A3) [Danio rerio]
Evalue: 2e-08 | Bitscore: 66
Identities = 50/175 (28%), Positives = 93/175 (53%), Gaps = 16/175 (9%) |
NCBI |
Show Blast
|
| XP_001926778.1 |
PREDICTED: solute carrier family 38, member 1 [Sus scrofa]
Evalue: 2e-08 | Bitscore: 65
Identities = 63/252 (25%), Positives = 120/252 (47%), Gaps = 21/252 (8%) |
NCBI |
Show Blast
|
| NP_001011051.1 |
solute carrier family 38, member 3 [Xenopus (Silurana) tropicalis]
Evalue: 3e-08 | Bitscore: 65
Identities = 46/177 (25%), Positives = 91/177 (51%), Gaps = 15/177 (8%) |
NCBI |
Show Blast
|
| No hits found against database O.RCC809 with an e-value better than 1e-3. |
| No hits found against database O.luci with an e-value better than 1e-3. |
| No hits found against database Self with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q9H2H9 |
Sodium-coupled neutral amino acid transporter 1 OS=Homo sapiens GN=SLC38A1 PE=1 SV=1
Evalue: 1e-10 | Bitscore: 68
Identities = 58/257 (22%), Positives = 113/257 (43%), Gaps = 28/257 (10%) |
SwissP |
Show Blast
|
| Q5XH90 |
Sodium-coupled neutral amino acid transporter 2 OS=Xenopus tropicalis GN=slc38a2 PE=2 SV=1
Evalue: 2e-10 | Bitscore: 68
Identities = 42/180 (23%), Positives = 92/180 (51%), Gaps = 17/180 (9%) |
SwissP |
Show Blast
|
| Q5R443 |
Sodium-coupled neutral amino acid transporter 1 OS=Pongo abelii GN=SLC38A1 PE=2 SV=1
Evalue: 2e-10 | Bitscore: 68
Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 28/257 (10%) |
SwissP |
Show Blast
|
| A1YG32 |
Sodium-coupled neutral amino acid transporter 2 OS=Pan paniscus GN=SLC38A2 PE=3 SV=1
Evalue: 6e-10 | Bitscore: 67
Identities = 40/167 (23%), Positives = 84/167 (50%), Gaps = 3/167 (1%) |
SwissP |
Show Blast
|
| Q96QD8 |
Sodium-coupled neutral amino acid transporter 2 OS=Homo sapiens GN=SLC38A2 PE=1 SV=2
Evalue: 6e-10 | Bitscore: 66
Identities = 40/167 (23%), Positives = 84/167 (50%), Gaps = 3/167 (1%) |
SwissP |
Show Blast
|
| Q9JM15 |
Sodium-coupled neutral amino acid transporter 1 OS=Rattus norvegicus GN=Slc38a1 PE=1 SV=1
Evalue: 7e-10 | Bitscore: 66
Identities = 58/254 (22%), Positives = 114/254 (44%), Gaps = 24/254 (9%) |
SwissP |
Show Blast
|
| A2VE31 |
Sodium-coupled neutral amino acid transporter 2 OS=Bos taurus GN=SLC38A2 PE=2 SV=1
Evalue: 9e-10 | Bitscore: 66
Identities = 37/167 (22%), Positives = 84/167 (50%), Gaps = 3/167 (1%) |
SwissP |
Show Blast
|
| Q8K2P7 |
Sodium-coupled neutral amino acid transporter 1 OS=Mus musculus GN=Slc38a1 PE=1 SV=1
Evalue: 1e-09 | Bitscore: 65
Identities = 58/254 (22%), Positives = 114/254 (44%), Gaps = 24/254 (9%) |
SwissP |
Show Blast
|
| Q969I6 |
Sodium-coupled neutral amino acid transporter 4 OS=Homo sapiens GN=SLC38A4 PE=1 SV=1
Evalue: 2e-09 | Bitscore: 64
Identities = 41/170 (24%), Positives = 89/170 (52%), Gaps = 9/170 (5%) |
SwissP |
Show Blast
|
| Q28HE5 |
Probable sodium-coupled neutral amino acid transporter 6 OS=Xenopus tropicalis GN=slc38a6 PE=2 SV=1
Evalue: 3e-09 | Bitscore: 64
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 11/172 (6%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| AT1G80510.1 |
| Symbols: | amino acid transporter family protein | chr1:30277992-30279461 FORWARD
Evalue: 8e-09 | Bitscore: 59
Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 5/190 (2%) |
Tair |
Show Blast
|
| AT2G40420.1 |
| Symbols: | amino acid transporter family protein | chr2:16884378-16886060 FORWARD
Evalue: 9e-09 | Bitscore: 59
Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 13/174 (7%) |
Tair |
Show Blast
|
| AT3G56200.1 |
| Symbols: | amino acid transporter family protein | chr3:20861066-20862758 FORWARD
Evalue: 2e-07 | Bitscore: 55
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 7/171 (4%) |
Tair |
Show Blast
|
| AT4G38250.1 |
| Symbols: | amino acid transporter family protein | chr4:17935527-17936837 FORWARD
Evalue: 8e-07 | Bitscore: 53
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 14/173 (8%) |
Tair |
Show Blast
|
| AT2G42005.1 |
| Symbols: | amino acid transporter family protein | chr2:17538401-17539642 REVERSE
Evalue: 1e-06 | Bitscore: 52
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 17/178 (9%) |
Tair |
Show Blast
|
| AT3G30390.2 |
| Symbols: | amino acid transporter family protein | chr3:11979591-11981306 REVERSE
Evalue: 6e-06 | Bitscore: 50
Identities = 58/260 (22%), Positives = 104/260 (40%), Gaps = 21/260 (8%) |
Tair |
Show Blast
|
| AT3G30390.1 |
| Symbols: | amino acid transporter family protein | chr3:11979591-11981306 REVERSE
Evalue: 6e-06 | Bitscore: 50
Identities = 58/260 (22%), Positives = 104/260 (40%), Gaps = 21/260 (8%) |
Tair |
Show Blast
|
| AT5G38820.1 |
| Symbols: | amino acid transporter family protein | chr5:15560711-15562412 FORWARD
Evalue: 6e-05 | Bitscore: 46
Identities = 60/260 (23%), Positives = 97/260 (37%), Gaps = 19/260 (7%) |
Tair |
Show Blast
|
| AT5G65990.1 |
| Symbols: | amino acid transporter family protein | chr5:26412181-26413547 FORWARD
Evalue: 0.001 | Bitscore: 42
Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 17/180 (9%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|
