- Gene ID
- Ot01g02250
- Locus
- Ot01g02250
- Functional Description
- actin-related protein 3 (ISS)
- Gene Type
- protein-coding gene
- Contig
- chrom01
- Last Modified On
- 08 March 2010 19h29
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- actin-related protein 3 (ISS)
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
protein binding
- Biological Process
-
n/a
Protein Domains
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
CAL50136.1 |
TPA: actin-related protein 3; AtARP3 (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1016 Identities = 641/641 (100%), Positives = 641/641 (100%), Gaps = 0/641 (0%) |
NCBI |
Show Blast
|
XP_001415475.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 660 Identities = 357/410 (87%), Positives = 381/410 (92%), Gaps = 3/410 (0%) |
NCBI |
Show Blast
|
ABR16368.1 |
unknown [Picea sitchensis]
Evalue: 1e-136 | Bitscore: 491 Identities = 264/427 (61%), Positives = 317/427 (74%), Gaps = 25/427 (5%) |
NCBI |
Show Blast
|
XP_002312654.1 |
predicted protein [Populus trichocarpa]
Evalue: 2e-133 | Bitscore: 480 Identities = 247/428 (57%), Positives = 311/428 (72%), Gaps = 26/428 (6%) |
NCBI |
Show Blast
|
XP_002315648.1 |
predicted protein [Populus trichocarpa]
Evalue: 3e-133 | Bitscore: 480 Identities = 248/428 (57%), Positives = 313/428 (73%), Gaps = 26/428 (6%) |
NCBI |
Show Blast
|
XP_002515041.1 |
protein binding protein, putative [Ricinus communis]
Evalue: 7e-133 | Bitscore: 478 Identities = 250/427 (58%), Positives = 312/427 (73%), Gaps = 25/427 (5%) |
NCBI |
Show Blast
|
CAM97883.1 |
actin-related protein 3 [Nicotiana tabacum]
Evalue: 6e-132 | Bitscore: 475 Identities = 246/426 (57%), Positives = 317/426 (74%), Gaps = 25/426 (5%) |
NCBI |
Show Blast
|
XP_002285370.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 3e-131 | Bitscore: 473 Identities = 250/428 (58%), Positives = 312/428 (72%), Gaps = 25/428 (5%) |
NCBI |
Show Blast
|
XP_001766600.1 |
actin related protein Arp3 subunit [Physcomitrella patens subsp. patens]
Evalue: 4e-131 | Bitscore: 473 Identities = 249/424 (58%), Positives = 309/424 (72%), Gaps = 22/424 (5%) |
NCBI |
Show Blast
|
CAL22910.1 |
actin-related protein ARP3 [Physcomitrella patens]
Evalue: 5e-131 | Bitscore: 472 Identities = 248/424 (58%), Positives = 308/424 (72%), Gaps = 22/424 (5%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
EAK11583.1 |
unknown [environmental sequence]
Evalue: 1e-52 | Bitscore: 207 Identities = 130/418 (31%), Positives = 195/418 (46%), Gaps = 55/418 (13%) |
GOS |
Show Blast
|
EAB74616.1 |
unknown [environmental sequence]
Evalue: 2e-20 | Bitscore: 100 Identities = 64/221 (28%), Positives = 106/221 (47%), Gaps = 23/221 (10%) |
GOS |
Show Blast
|
EAE32562.1 |
unknown [environmental sequence]
Evalue: 6e-12 | Bitscore: 72 Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 11/116 (9%) |
GOS |
Show Blast
|
EAF55222.1 |
unknown [environmental sequence]
Evalue: 4e-05 | Bitscore: 50 Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 18/131 (13%) |
GOS |
Show Blast
|
EAC22014.1 |
unknown [environmental sequence]
Evalue: 0.0004 | Bitscore: 46 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 5/95 (5%) |
GOS |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
CAL50136.1 |
TPA: actin-related protein 3; AtARP3 (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1016 Identities = 641/641 (100%), Positives = 641/641 (100%), Gaps = 0/641 (0%) |
NCBI |
Show Blast
|
XP_001415475.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 660 Identities = 357/410 (87%), Positives = 381/410 (92%), Gaps = 3/410 (0%) |
NCBI |
Show Blast
|
ABR16368.1 |
unknown [Picea sitchensis]
Evalue: 1e-136 | Bitscore: 491 Identities = 264/427 (61%), Positives = 317/427 (74%), Gaps = 25/427 (5%) |
NCBI |
Show Blast
|
XP_002312654.1 |
predicted protein [Populus trichocarpa]
Evalue: 2e-133 | Bitscore: 480 Identities = 247/428 (57%), Positives = 311/428 (72%), Gaps = 26/428 (6%) |
NCBI |
Show Blast
|
XP_002315648.1 |
predicted protein [Populus trichocarpa]
Evalue: 3e-133 | Bitscore: 480 Identities = 248/428 (57%), Positives = 313/428 (73%), Gaps = 26/428 (6%) |
NCBI |
Show Blast
|
XP_002515041.1 |
protein binding protein, putative [Ricinus communis]
Evalue: 7e-133 | Bitscore: 478 Identities = 250/427 (58%), Positives = 312/427 (73%), Gaps = 25/427 (5%) |
NCBI |
Show Blast
|
CAM97883.1 |
actin-related protein 3 [Nicotiana tabacum]
Evalue: 6e-132 | Bitscore: 475 Identities = 246/426 (57%), Positives = 317/426 (74%), Gaps = 25/426 (5%) |
NCBI |
Show Blast
|
XP_002285370.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 3e-131 | Bitscore: 473 Identities = 250/428 (58%), Positives = 312/428 (72%), Gaps = 25/428 (5%) |
NCBI |
Show Blast
|
XP_001766600.1 |
actin related protein Arp3 subunit [Physcomitrella patens subsp. patens]
Evalue: 4e-131 | Bitscore: 473 Identities = 249/424 (58%), Positives = 309/424 (72%), Gaps = 22/424 (5%) |
NCBI |
Show Blast
|
CAL22910.1 |
actin-related protein ARP3 [Physcomitrella patens]
Evalue: 5e-131 | Bitscore: 472 Identities = 248/424 (58%), Positives = 308/424 (72%), Gaps = 22/424 (5%) |
NCBI |
Show Blast
|
No hits found against database O.RCC809 with an e-value better than 1e-3. |
No hits found against database O.luci with an e-value better than 1e-3. |
ProteinID | Description / BlastScore | Database | Actions |
Ot16g00370 |
chrom16.0001 [46940..47431,47596..48594] inframe stop codon
Evalue: 3e-48 | Bitscore: 188 Identities = 112/368 (30%), Positives = 171/368 (46%), Gaps = 53/368 (14%) |
Self |
Show Blast
|
Ot14g03380 |
chrom14.0001 [487878..489098]
Evalue: 4e-43 | Bitscore: 171 Identities = 129/401 (32%), Positives = 186/401 (46%), Gaps = 39/401 (9%) |
Self |
Show Blast
|
Ot04g02770 |
chrom04.0001 [420073..421347]
Evalue: 4e-29 | Bitscore: 124 Identities = 114/441 (25%), Positives = 183/441 (41%), Gaps = 67/441 (15%) |
Self |
Show Blast
|
Ot14g02140 |
chrom14.0001 [311572..311973]
Evalue: 2e-12 | Bitscore: 69 Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 11/130 (8%) |
Self |
Show Blast
|
Ot08g01330 |
chrom08.0001 [228810..229388]
Evalue: 0.0001 | Bitscore: 43 Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 3/74 (4%) |
Self |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
Q9SAF1 |
Actin-related protein 3 OS=Arabidopsis thaliana GN=ARP3 PE=1 SV=1
Evalue: 1e-132 | Bitscore: 471 Identities = 229/427 (53%), Positives = 296/427 (69%), Gaps = 25/427 (5%) |
SwissP |
Show Blast
|
A2X6S3 |
Actin-related protein 3 OS=Oryza sativa subsp. indica GN=ARP3 PE=2 SV=2
Evalue: 1e-129 | Bitscore: 462 Identities = 224/428 (52%), Positives = 291/428 (67%), Gaps = 26/428 (6%) |
SwissP |
Show Blast
|
Q6K908 |
Actin-related protein 3 OS=Oryza sativa subsp. japonica GN=ARP3 PE=2 SV=1
Evalue: 1e-129 | Bitscore: 462 Identities = 224/428 (52%), Positives = 291/428 (67%), Gaps = 26/428 (6%) |
SwissP |
Show Blast
|
P53490 |
Actin-related protein 3 OS=Acanthamoeba castellanii GN=ARP3 PE=2 SV=1
Evalue: 1e-122 | Bitscore: 440 Identities = 219/418 (52%), Positives = 277/418 (66%), Gaps = 18/418 (4%) |
SwissP |
Show Blast
|
P42528 |
Actin-related protein 3 OS=Dictyostelium discoideum GN=arpC PE=1 SV=1
Evalue: 1e-120 | Bitscore: 431 Identities = 215/409 (52%), Positives = 280/409 (68%), Gaps = 11/409 (2%) |
SwissP |
Show Blast
|
Q4V7C7 |
Actin-related protein 3 OS=Rattus norvegicus GN=Actr3 PE=1 SV=1
Evalue: 1e-114 | Bitscore: 411 Identities = 205/412 (49%), Positives = 269/412 (65%), Gaps = 13/412 (3%) |
SwissP |
Show Blast
|
P61158 |
Actin-related protein 3 OS=Homo sapiens GN=ACTR3 PE=1 SV=3
Evalue: 1e-114 | Bitscore: 411 Identities = 205/412 (49%), Positives = 269/412 (65%), Gaps = 13/412 (3%) |
SwissP |
Show Blast
|
Q5R8R1 |
Actin-related protein 3 OS=Pongo abelii GN=ACTR3 PE=2 SV=3
Evalue: 1e-114 | Bitscore: 411 Identities = 205/412 (49%), Positives = 269/412 (65%), Gaps = 13/412 (3%) |
SwissP |
Show Blast
|
Q99JY9 |
Actin-related protein 3 OS=Mus musculus GN=Actr3 PE=1 SV=3
Evalue: 1e-114 | Bitscore: 411 Identities = 205/412 (49%), Positives = 269/412 (65%), Gaps = 13/412 (3%) |
SwissP |
Show Blast
|
P61157 |
Actin-related protein 3 OS=Bos taurus GN=ACTR3 PE=1 SV=3
Evalue: 1e-114 | Bitscore: 411 Identities = 205/412 (49%), Positives = 269/412 (65%), Gaps = 13/412 (3%) |
SwissP |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
AT1G13180.1 |
| Symbols: ARP3, ATARP3, DIS1 | DIS1 (DISTORTED TRICHOMES 1); structural constituent of cytoskeleton |
Evalue: 1e-133 | Bitscore: 471 Identities = 229/427 (53%), Positives = 296/427 (69%), Gaps = 25/427 (5%) |
Tair |
Show Blast
|
AT2G42100.1 |
| Symbols: | actin, putative | chr2:17567289-17569023 FORWARD
Evalue: 2e-56 | Bitscore: 217 Identities = 132/400 (33%), Positives = 191/400 (47%), Gaps = 37/400 (9%) |
Tair |
Show Blast
|
AT2G37620.2 |
| Symbols: AAC1, ACT1 | ACT1 (ACTIN 1); structural constituent of cytoskeleton | chr2:15786839-15788319 FORWARD
Evalue: 2e-54 | Bitscore: 210 Identities = 126/396 (31%), Positives = 188/396 (47%), Gaps = 31/396 (7%) |
Tair |
Show Blast
|
AT3G53750.1 |
| Symbols: ACT3 | ACT3 (ACTIN 3); structural constituent of cytoskeleton | chr3:19926902-19928349 FORWARD
Evalue: 2e-54 | Bitscore: 210 Identities = 126/396 (31%), Positives = 188/396 (47%), Gaps = 31/396 (7%) |
Tair |
Show Blast
|
AT2G37620.1 |
| Symbols: AAC1, ACT1 | ACT1 (ACTIN 1); structural constituent of cytoskeleton | chr2:15786839-15788319 FORWARD
Evalue: 2e-54 | Bitscore: 210 Identities = 126/396 (31%), Positives = 188/396 (47%), Gaps = 31/396 (7%) |
Tair |
Show Blast
|
AT3G12110.1 |
| Symbols: ACT11 | ACT11 (ACTIN-11); structural constituent of cytoskeleton | chr3:3858122-3859615 FORWARD
Evalue: 3e-54 | Bitscore: 209 Identities = 127/397 (31%), Positives = 189/397 (47%), Gaps = 33/397 (8%) |
Tair |
Show Blast
|
AT5G09810.1 |
| Symbols: ACT2/7, ACT7 | ACT7 (actin 7) | chr5:3052810-3054221 FORWARD
Evalue: 3e-54 | Bitscore: 209 Identities = 129/396 (32%), Positives = 188/396 (47%), Gaps = 31/396 (7%) |
Tair |
Show Blast
|
AT5G59370.1 |
| Symbols: ACT4 | ACT4 (ACTIN 4) | chr5:23967335-23968812 FORWARD
Evalue: 1e-53 | Bitscore: 207 Identities = 127/398 (31%), Positives = 189/398 (47%), Gaps = 35/398 (8%) |
Tair |
Show Blast
|
AT3G46520.1 |
| Symbols: ACT12 | ACT12 (ACTIN-12); structural constituent of cytoskeleton | chr3:17139552-17140966 FORWARD
Evalue: 1e-53 | Bitscore: 207 Identities = 127/398 (31%), Positives = 189/398 (47%), Gaps = 35/398 (8%) |
Tair |
Show Blast
|
AT5G59370.2 |
| Symbols: ACT4 | ACT4 (ACTIN 4) | chr5:23967335-23968812 FORWARD
Evalue: 1e-53 | Bitscore: 207 Identities = 127/398 (31%), Positives = 189/398 (47%), Gaps = 35/398 (8%) |
Tair |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Protein
Associated ESTs/cDNAs
- n/a
-
|