- Gene ID
- Bathy18g01430
- Locus
- Bathy18g01430
- Functional Description
- predicted protein
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_18
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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pico-PLAZA - lookup this gene in the PLAZA resource |
Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- predicted protein
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
protein binding
- Biological Process
-
n/a
Protein Domains
Domain ID | Description | Database |
IPR013785 |
Aldolase-type TIM barrel |
InterPro |
IPR000644 |
Cystathionine beta-synthase, core |
InterPro |
SSF54631 |
CBS-domain |
superfamily |
PTHR11911 |
FAMILY NOT NAMED |
HMMPanther |
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
XP_003081808.1 |
unnamed protein product [Ostreococcus tauri]
Evalue: 4e-27 | Bitscore: 124 Identities = 74/152 (49%), Positives = 98/152 (64%), Gaps = 10/152 (7%) |
NCBI |
Show Blast
|
XP_002509118.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 7e-22 | Bitscore: 107 Identities = 67/151 (44%), Positives = 86/151 (57%), Gaps = 26/151 (17%) |
NCBI |
Show Blast
|
CBB36496.1 |
Arabidopsis protein targeted to mitochondria proteins At5g10860 [Saccharum hybrid cultivar R570]
Evalue: 2e-16 | Bitscore: 89 Identities = 51/109 (47%), Positives = 68/109 (62%), Gaps = 10/109 (9%) |
NCBI |
Show Blast
|
NP_001150216.1 |
CBS domain protein [Zea mays]
Evalue: 2e-16 | Bitscore: 89 Identities = 51/112 (46%), Positives = 70/112 (63%), Gaps = 10/112 (9%) |
NCBI |
Show Blast
|
CBB36473.1 |
Arabidopsis protein targeted to mitochondria proteins At5g10860 [Saccharum hybrid cultivar R570]
Evalue: 2e-16 | Bitscore: 89 Identities = 51/109 (47%), Positives = 68/109 (62%), Gaps = 10/109 (9%) |
NCBI |
Show Blast
|
XP_001420233.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 9e-16 | Bitscore: 86 Identities = 51/109 (47%), Positives = 69/109 (63%), Gaps = 10/109 (9%) |
NCBI |
Show Blast
|
ACJ84966.1 |
unknown [Medicago truncatula]
Evalue: 1e-15 | Bitscore: 86 Identities = 49/109 (45%), Positives = 67/109 (61%), Gaps = 10/109 (9%) |
NCBI |
Show Blast
|
XP_002526389.1 |
conserved hypothetical protein [Ricinus communis]
Evalue: 2e-15 | Bitscore: 85 Identities = 49/109 (45%), Positives = 68/109 (62%), Gaps = 10/109 (9%) |
NCBI |
Show Blast
|
CBI15781.3 |
unnamed protein product [Vitis vinifera]
Evalue: 2e-15 | Bitscore: 85 Identities = 49/109 (45%), Positives = 67/109 (61%), Gaps = 10/109 (9%) |
NCBI |
Show Blast
|
XP_002262902.1 |
PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]
Evalue: 3e-15 | Bitscore: 85 Identities = 49/109 (45%), Positives = 67/109 (61%), Gaps = 10/109 (9%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
XP_003081808.1 |
unnamed protein product [Ostreococcus tauri]
Evalue: 4e-27 | Bitscore: 124 Identities = 74/152 (49%), Positives = 98/152 (64%), Gaps = 10/152 (7%) |
NCBI |
Show Blast
|
XP_002509118.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 7e-22 | Bitscore: 107 Identities = 67/151 (44%), Positives = 86/151 (57%), Gaps = 26/151 (17%) |
NCBI |
Show Blast
|
CBB36496.1 |
Arabidopsis protein targeted to mitochondria proteins At5g10860 [Saccharum hybrid cultivar R570]
Evalue: 2e-16 | Bitscore: 89 Identities = 51/109 (47%), Positives = 68/109 (62%), Gaps = 10/109 (9%) |
NCBI |
Show Blast
|
NP_001150216.1 |
CBS domain protein [Zea mays]
Evalue: 2e-16 | Bitscore: 89 Identities = 51/112 (46%), Positives = 70/112 (63%), Gaps = 10/112 (9%) |
NCBI |
Show Blast
|
CBB36473.1 |
Arabidopsis protein targeted to mitochondria proteins At5g10860 [Saccharum hybrid cultivar R570]
Evalue: 2e-16 | Bitscore: 89 Identities = 51/109 (47%), Positives = 68/109 (62%), Gaps = 10/109 (9%) |
NCBI |
Show Blast
|
XP_001420233.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 9e-16 | Bitscore: 86 Identities = 51/109 (47%), Positives = 69/109 (63%), Gaps = 10/109 (9%) |
NCBI |
Show Blast
|
ACJ84966.1 |
unknown [Medicago truncatula]
Evalue: 1e-15 | Bitscore: 86 Identities = 49/109 (45%), Positives = 67/109 (61%), Gaps = 10/109 (9%) |
NCBI |
Show Blast
|
XP_002526389.1 |
conserved hypothetical protein [Ricinus communis]
Evalue: 2e-15 | Bitscore: 85 Identities = 49/109 (45%), Positives = 68/109 (62%), Gaps = 10/109 (9%) |
NCBI |
Show Blast
|
CBI15781.3 |
unnamed protein product [Vitis vinifera]
Evalue: 2e-15 | Bitscore: 85 Identities = 49/109 (45%), Positives = 67/109 (61%), Gaps = 10/109 (9%) |
NCBI |
Show Blast
|
XP_002262902.1 |
PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]
Evalue: 3e-15 | Bitscore: 85 Identities = 49/109 (45%), Positives = 67/109 (61%), Gaps = 10/109 (9%) |
NCBI |
Show Blast
|
No hits found against database Self with an e-value better than 1e-3. |
ProteinID | Description / BlastScore | Database | Actions |
Q9LEV3 |
Uncharacterized protein At5g10860, mitochondrial OS=Arabidopsis thaliana GN=At5g10860 PE=1 SV=1
Evalue: 2e-14 | Bitscore: 77 Identities = 48/112 (42%), Positives = 67/112 (59%), Gaps = 10/112 (8%) |
SwissP |
Show Blast
|
P32987 |
Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus ambivalens PE=4 SV=1
Evalue: 0.0004 | Bitscore: 43 Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 12/106 (11%) |
SwissP |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
- n/a
-
|