- Gene ID
- Bathy16g00270
- Locus
- Bathy16g00270
- Functional Description
- peroxiredoxin family protein/glutaredoxin
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_16
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- peroxiredoxin family protein/glutaredoxin
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
oxidoreductase activity
- Biological Process
-
n/a
Protein Domains
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| XP_003060416.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 8e-50 | Bitscore: 201
Identities = 96/162 (59%), Positives = 121/162 (75%), Gaps = 2/162 (1%) |
NCBI |
Show Blast
|
| XP_001751486.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 3e-48 | Bitscore: 196
Identities = 92/164 (56%), Positives = 125/164 (76%), Gaps = 4/164 (2%) |
NCBI |
Show Blast
|
| EFN59443.1 |
hypothetical protein CHLNCDRAFT_29579 [Chlorella variabilis]
Evalue: 5e-48 | Bitscore: 195
Identities = 97/162 (60%), Positives = 120/162 (74%), Gaps = 3/162 (2%) |
NCBI |
Show Blast
|
| ABK92641.1 |
unknown [Populus trichocarpa]
Evalue: 3e-47 | Bitscore: 192
Identities = 92/163 (56%), Positives = 121/163 (74%), Gaps = 5/163 (3%) |
NCBI |
Show Blast
|
| XP_001762117.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 4e-47 | Bitscore: 192
Identities = 91/162 (56%), Positives = 122/162 (75%), Gaps = 4/162 (2%) |
NCBI |
Show Blast
|
| XP_002327377.1 |
predicted protein [Populus trichocarpa]
Evalue: 1e-46 | Bitscore: 191
Identities = 92/163 (56%), Positives = 121/163 (74%), Gaps = 5/163 (3%) |
NCBI |
Show Blast
|
| XP_001689455.1 |
peroxiredoxin, type II [Chlamydomonas reinhardtii]
Evalue: 1e-46 | Bitscore: 191
Identities = 93/160 (58%), Positives = 118/160 (74%), Gaps = 2/160 (1%) |
NCBI |
Show Blast
|
| XP_002956367.1 |
peroxiredoxin, type II [Volvox carteri f. nagariensis]
Evalue: 3e-46 | Bitscore: 190
Identities = 92/160 (58%), Positives = 117/160 (73%), Gaps = 2/160 (1%) |
NCBI |
Show Blast
|
| XP_002528579.1 |
peroxiredoxin, putative [Ricinus communis]
Evalue: 6e-46 | Bitscore: 189
Identities = 89/162 (55%), Positives = 123/162 (76%), Gaps = 4/162 (2%) |
NCBI |
Show Blast
|
| XP_002964605.1 |
hypothetical protein SELMODRAFT_28066 [Selaginella moellendorffii]
Evalue: 6e-46 | Bitscore: 189
Identities = 92/162 (57%), Positives = 120/162 (74%), Gaps = 4/162 (2%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| XP_003060416.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 8e-50 | Bitscore: 201
Identities = 96/162 (59%), Positives = 121/162 (75%), Gaps = 2/162 (1%) |
NCBI |
Show Blast
|
| XP_001751486.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 3e-48 | Bitscore: 196
Identities = 92/164 (56%), Positives = 125/164 (76%), Gaps = 4/164 (2%) |
NCBI |
Show Blast
|
| EFN59443.1 |
hypothetical protein CHLNCDRAFT_29579 [Chlorella variabilis]
Evalue: 5e-48 | Bitscore: 195
Identities = 97/162 (60%), Positives = 120/162 (74%), Gaps = 3/162 (2%) |
NCBI |
Show Blast
|
| ABK92641.1 |
unknown [Populus trichocarpa]
Evalue: 3e-47 | Bitscore: 192
Identities = 92/163 (56%), Positives = 121/163 (74%), Gaps = 5/163 (3%) |
NCBI |
Show Blast
|
| XP_001762117.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 4e-47 | Bitscore: 192
Identities = 91/162 (56%), Positives = 122/162 (75%), Gaps = 4/162 (2%) |
NCBI |
Show Blast
|
| XP_002327377.1 |
predicted protein [Populus trichocarpa]
Evalue: 1e-46 | Bitscore: 191
Identities = 92/163 (56%), Positives = 121/163 (74%), Gaps = 5/163 (3%) |
NCBI |
Show Blast
|
| XP_001689455.1 |
peroxiredoxin, type II [Chlamydomonas reinhardtii]
Evalue: 1e-46 | Bitscore: 191
Identities = 93/160 (58%), Positives = 118/160 (74%), Gaps = 2/160 (1%) |
NCBI |
Show Blast
|
| XP_002956367.1 |
peroxiredoxin, type II [Volvox carteri f. nagariensis]
Evalue: 3e-46 | Bitscore: 190
Identities = 92/160 (58%), Positives = 117/160 (73%), Gaps = 2/160 (1%) |
NCBI |
Show Blast
|
| XP_002528579.1 |
peroxiredoxin, putative [Ricinus communis]
Evalue: 6e-46 | Bitscore: 189
Identities = 89/162 (55%), Positives = 123/162 (76%), Gaps = 4/162 (2%) |
NCBI |
Show Blast
|
| XP_002964605.1 |
hypothetical protein SELMODRAFT_28066 [Selaginella moellendorffii]
Evalue: 6e-46 | Bitscore: 189
Identities = 92/162 (57%), Positives = 120/162 (74%), Gaps = 4/162 (2%) |
NCBI |
Show Blast
|
| No hits found against database Self with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q949U7 |
Peroxiredoxin-2E, chloroplastic OS=Arabidopsis thaliana GN=PRXIIE PE=1 SV=2
Evalue: 9e-42 | Bitscore: 170
Identities = 88/190 (46%), Positives = 125/190 (65%), Gaps = 5/190 (2%) |
SwissP |
Show Blast
|
| Q69TY4 |
Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-1 PE=2 SV=1
Evalue: 2e-40 | Bitscore: 166
Identities = 83/160 (51%), Positives = 117/160 (73%), Gaps = 5/160 (3%) |
SwissP |
Show Blast
|
| Q7F8S5 |
Peroxiredoxin-2E-2, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-2 PE=1 SV=1
Evalue: 3e-40 | Bitscore: 165
Identities = 86/164 (52%), Positives = 119/164 (72%), Gaps = 6/164 (3%) |
SwissP |
Show Blast
|
| Q9XEX2 |
Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB PE=1 SV=1
Evalue: 4e-36 | Bitscore: 152
Identities = 78/160 (48%), Positives = 102/160 (63%), Gaps = 2/160 (1%) |
SwissP |
Show Blast
|
| O22711 |
Peroxiredoxin-2D OS=Arabidopsis thaliana GN=PRXIID PE=1 SV=2
Evalue: 9e-36 | Bitscore: 150
Identities = 75/160 (46%), Positives = 101/160 (63%), Gaps = 2/160 (1%) |
SwissP |
Show Blast
|
| Q9SRZ4 |
Peroxiredoxin-2C OS=Arabidopsis thaliana GN=PRXIIC PE=1 SV=1
Evalue: 2e-35 | Bitscore: 149
Identities = 75/160 (46%), Positives = 101/160 (63%), Gaps = 2/160 (1%) |
SwissP |
Show Blast
|
| Q9FR35 |
Peroxiredoxin-2C OS=Oryza sativa subsp. japonica GN=PRXIIC PE=1 SV=1
Evalue: 4e-34 | Bitscore: 145
Identities = 75/157 (47%), Positives = 100/157 (63%), Gaps = 2/157 (1%) |
SwissP |
Show Blast
|
| P73728 |
Putative peroxiredoxin sll1621 OS=Synechocystis sp. (strain PCC 6803) GN=sll1621 PE=1 SV=1
Evalue: 1e-24 | Bitscore: 113
Identities = 57/122 (46%), Positives = 82/122 (67%), Gaps = 2/122 (1%) |
SwissP |
Show Blast
|
| Q53212 |
Putative peroxiredoxin y4vD OS=Rhizobium sp. (strain NGR234) GN=NGR_a01200 PE=3 SV=1
Evalue: 1e-24 | Bitscore: 113
Identities = 55/121 (45%), Positives = 79/121 (65%) |
SwissP |
Show Blast
|
| P14293 |
Putative peroxiredoxin-B OS=Candida boidinii GN=PMPB PE=1 SV=3
Evalue: 1e-23 | Bitscore: 110
Identities = 66/165 (40%), Positives = 92/165 (55%), Gaps = 7/165 (4%) |
SwissP |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
| EST ID | SuperContig_15.clus421.Contig1 |
Support Model | Y |
More Info |
| Comment | EST is non-spliced and has no reliable strand information |
| Mapping Location | 50358..50827 |
Strand - |
|
