- Gene ID
- Bathy13g01090
- Locus
- Bathy13g01090
- Functional Description
- predicted protein
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_13
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- predicted protein
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
| Domain ID | Description | Database |
|---|
|
PTHR24089 |
FAMILY NOT NAMED |
HMMPanther |
|
IPR018249 |
EF-HAND 2 |
InterPro |
|
IPR011992 |
EF-hand-like domain |
InterPro |
|
IPR023395 |
Mitochondrial carrier domain |
InterPro |
|
SSF47473 |
EF-hand |
superfamily |
|
IPR018108 |
Mitochondrial substrate/solute carrier |
InterPro |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| XP_003082063.1 |
putative mitochondrial carrier protein (ISS) [Ostreococcus tauri]
Evalue: 2e-157 | Bitscore: 561
Identities = 288/518 (56%), Positives = 391/518 (75%), Gaps = 18/518 (3%) |
NCBI |
Show Blast
|
| XP_003061528.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 1e-156 | Bitscore: 558
Identities = 290/527 (55%), Positives = 382/527 (72%), Gaps = 15/527 (3%) |
NCBI |
Show Blast
|
| XP_002509228.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 1e-141 | Bitscore: 508
Identities = 279/459 (61%), Positives = 354/459 (77%), Gaps = 6/459 (1%) |
NCBI |
Show Blast
|
| NP_850252.1 |
mitochondrial substrate carrier family protein [Arabidopsis thaliana]
Evalue: 2e-106 | Bitscore: 391
Identities = 225/465 (48%), Positives = 310/465 (67%), Gaps = 24/465 (5%) |
NCBI |
Show Blast
|
| NP_001143151.1 |
hypothetical protein LOC100275632 [Zea mays]
Evalue: 3e-106 | Bitscore: 390
Identities = 215/463 (46%), Positives = 313/463 (68%), Gaps = 16/463 (3%) |
NCBI |
Show Blast
|
| XP_002442640.1 |
hypothetical protein SORBIDRAFT_08g000350 [Sorghum bicolor]
Evalue: 7e-106 | Bitscore: 389
Identities = 216/463 (47%), Positives = 311/463 (67%), Gaps = 16/463 (3%) |
NCBI |
Show Blast
|
| XP_002879576.1 |
mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata]
Evalue: 1e-105 | Bitscore: 389
Identities = 224/465 (48%), Positives = 309/465 (66%), Gaps = 24/465 (5%) |
NCBI |
Show Blast
|
| NP_001065524.1 |
Os11g0103700 [Oryza sativa Japonica Group]
Evalue: 1e-104 | Bitscore: 385
Identities = 214/463 (46%), Positives = 309/463 (67%), Gaps = 16/463 (3%) |
NCBI |
Show Blast
|
| NP_001065240.1 |
Os12g0103000 [Oryza sativa Japonica Group]
Evalue: 1e-104 | Bitscore: 385
Identities = 214/463 (46%), Positives = 309/463 (67%), Gaps = 16/463 (3%) |
NCBI |
Show Blast
|
| XP_001763497.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 2e-103 | Bitscore: 381
Identities = 214/460 (47%), Positives = 306/460 (67%), Gaps = 14/460 (3%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| XP_003082063.1 |
putative mitochondrial carrier protein (ISS) [Ostreococcus tauri]
Evalue: 2e-157 | Bitscore: 561
Identities = 288/518 (56%), Positives = 391/518 (75%), Gaps = 18/518 (3%) |
NCBI |
Show Blast
|
| XP_003061528.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 1e-156 | Bitscore: 558
Identities = 290/527 (55%), Positives = 382/527 (72%), Gaps = 15/527 (3%) |
NCBI |
Show Blast
|
| XP_002509228.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 1e-141 | Bitscore: 508
Identities = 279/459 (61%), Positives = 354/459 (77%), Gaps = 6/459 (1%) |
NCBI |
Show Blast
|
| NP_850252.1 |
mitochondrial substrate carrier family protein [Arabidopsis thaliana]
Evalue: 2e-106 | Bitscore: 391
Identities = 225/465 (48%), Positives = 310/465 (67%), Gaps = 24/465 (5%) |
NCBI |
Show Blast
|
| NP_001143151.1 |
hypothetical protein LOC100275632 [Zea mays]
Evalue: 3e-106 | Bitscore: 390
Identities = 215/463 (46%), Positives = 313/463 (68%), Gaps = 16/463 (3%) |
NCBI |
Show Blast
|
| XP_002442640.1 |
hypothetical protein SORBIDRAFT_08g000350 [Sorghum bicolor]
Evalue: 7e-106 | Bitscore: 389
Identities = 216/463 (47%), Positives = 311/463 (67%), Gaps = 16/463 (3%) |
NCBI |
Show Blast
|
| XP_002879576.1 |
mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata]
Evalue: 1e-105 | Bitscore: 389
Identities = 224/465 (48%), Positives = 309/465 (66%), Gaps = 24/465 (5%) |
NCBI |
Show Blast
|
| NP_001065524.1 |
Os11g0103700 [Oryza sativa Japonica Group]
Evalue: 1e-104 | Bitscore: 385
Identities = 214/463 (46%), Positives = 309/463 (67%), Gaps = 16/463 (3%) |
NCBI |
Show Blast
|
| NP_001065240.1 |
Os12g0103000 [Oryza sativa Japonica Group]
Evalue: 1e-104 | Bitscore: 385
Identities = 214/463 (46%), Positives = 309/463 (67%), Gaps = 16/463 (3%) |
NCBI |
Show Blast
|
| XP_001763497.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 2e-103 | Bitscore: 381
Identities = 214/460 (47%), Positives = 306/460 (67%), Gaps = 14/460 (3%) |
NCBI |
Show Blast
|
| No hits found against database Self with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q10442 |
Uncharacterized mitochondrial carrier C12B10.09 OS=Schizosaccharomyces pombe GN=SPAC12B10.09 PE=2 SV=1
Evalue: 2e-24 | Bitscore: 114
Identities = 95/281 (33%), Positives = 141/281 (50%), Gaps = 31/281 (11%) |
SwissP |
Show Blast
|
| Q86AV5 |
Mitochondrial substrate carrier family protein X OS=Dictyostelium discoideum GN=mcfX PE=3 SV=1
Evalue: 8e-22 | Bitscore: 105
Identities = 81/274 (29%), Positives = 132/274 (48%), Gaps = 15/274 (5%) |
SwissP |
Show Blast
|
| Q54RB9 |
Calcium-binding mitochondrial carrier protein OS=Dictyostelium discoideum GN=mcfO PE=3 SV=1
Evalue: 1e-19 | Bitscore: 99
Identities = 84/302 (27%), Positives = 134/302 (44%), Gaps = 19/302 (6%) |
SwissP |
Show Blast
|
| Q6GLA2 |
S-adenosylmethionine mitochondrial carrier protein OS=Xenopus tropicalis GN=slc25a26 PE=2 SV=1
Evalue: 3e-19 | Bitscore: 97
Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 19/270 (7%) |
SwissP |
Show Blast
|
| Q4V9P0 |
S-adenosylmethionine mitochondrial carrier protein OS=Danio rerio GN=slc25a26 PE=2 SV=1
Evalue: 4e-19 | Bitscore: 97
Identities = 74/270 (27%), Positives = 119/270 (44%), Gaps = 18/270 (6%) |
SwissP |
Show Blast
|
| Q03829 |
Uncharacterized mitochondrial carrier YMR166C OS=Saccharomyces cerevisiae GN=YMR166C PE=1 SV=1
Evalue: 5e-19 | Bitscore: 96
Identities = 82/308 (26%), Positives = 133/308 (43%), Gaps = 46/308 (14%) |
SwissP |
Show Blast
|
| O60029 |
Putative mitochondrial carrier protein PET8 OS=Ashbya gossypii GN=PET8 PE=3 SV=1
Evalue: 2e-18 | Bitscore: 95
Identities = 85/273 (31%), Positives = 125/273 (45%), Gaps = 25/273 (9%) |
SwissP |
Show Blast
|
| Q55E45 |
Mitochondrial substrate carrier family protein E OS=Dictyostelium discoideum GN=mcfE PE=3 SV=1
Evalue: 4e-18 | Bitscore: 93
Identities = 85/286 (29%), Positives = 123/286 (43%), Gaps = 25/286 (8%) |
SwissP |
Show Blast
|
| Q5U680 |
S-adenosylmethionine mitochondrial carrier protein OS=Mus musculus GN=Slc25a26 PE=2 SV=2
Evalue: 3e-17 | Bitscore: 90
Identities = 72/267 (26%), Positives = 117/267 (43%), Gaps = 18/267 (6%) |
SwissP |
Show Blast
|
| A6QR09 |
S-adenosylmethionine mitochondrial carrier protein OS=Bos taurus GN=SLC25A26 PE=2 SV=1
Evalue: 4e-17 | Bitscore: 90
Identities = 75/267 (28%), Positives = 113/267 (42%), Gaps = 29/267 (10%) |
SwissP |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
| EST ID | SuperContig_10.clus306.Contig1 |
Support Model | Y |
More Info |
| Mapping Location | 276595..277246 |
Strand + |
|
