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Bathycoccus prasinos


Gene ID
Bathy13g00670
Locus
Bathy13g00670
Functional Description
cytosolic phosphoglucose isomerase
Gene Type
protein-coding gene
Contig
bathy_chrom_13
Last Modified On
12 July 2011 21h39
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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pico-PLAZA - lookup this gene in the PLAZA resource

Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
cytosolic phosphoglucose isomerase
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
1.
glucose-6-phosphate isomerase activity

Biological Process
1.
gluconeogenesis

2.
glycolytic process

Protein Domains 


Domain IDDescriptionDatabase
IPR018189 Phosphoglucose isomerase, conserved site InterPro
G3DSA:3.40.50.10490 no description Gene3D
IPR001672 Phosphoglucose isomerase (PGI) InterPro
IPR023096 Phosphoglucose isomerase, C-terminal InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
XP_003082100.1 cytosolic phosphoglucose isomerase (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1020
Identities = 472/581 (81%), Positives = 528/581 (91%), Gaps = 0/581 (0%)
NCBI
Show Blast
XP_001420367.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 1012
Identities = 473/589 (80%), Positives = 527/589 (89%), Gaps = 1/589 (0%)
NCBI
Show Blast
XP_002509192.1 phosphoglucose isomerase [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 1003
Identities = 469/582 (81%), Positives = 525/582 (90%), Gaps = 0/582 (0%)
NCBI
Show Blast
XP_003061563.1 predicted protein [Micromonas pusilla CCMP1545]
Evalue: 0.0 | Bitscore: 961
Identities = 466/607 (77%), Positives = 516/607 (85%), Gaps = 26/607 (4%)
NCBI
Show Blast
XP_002975871.1 hypothetical protein SELMODRAFT_104526 [Selaginella moellendorffii]
Evalue: 0.0 | Bitscore: 866
Identities = 405/550 (74%), Positives = 466/550 (85%), Gaps = 3/550 (1%)
NCBI
Show Blast
XP_002946940.1 hypothetical protein VOLCADRAFT_103185 [Volvox carteri f. nagariensis]
Evalue: 0.0 | Bitscore: 863
Identities = 402/578 (70%), Positives = 475/578 (82%), Gaps = 0/578 (0%)
NCBI
Show Blast
ACI29026.1 glucose-6-phosphate isomerase [Dunaliella salina]
Evalue: 0.0 | Bitscore: 860
Identities = 405/581 (70%), Positives = 476/581 (82%), Gaps = 0/581 (0%)
NCBI
Show Blast
XP_002968611.1 hypothetical protein SELMODRAFT_89539 [Selaginella moellendorffii]
Evalue: 0.0 | Bitscore: 859
Identities = 403/552 (73%), Positives = 467/552 (85%), Gaps = 5/552 (1%)
NCBI
Show Blast
ABK00065.1 cytosolic glucose-6-phosphate isomerase [Marchantia polymorpha]
Evalue: 0.0 | Bitscore: 852
Identities = 407/572 (71%), Positives = 467/572 (82%), Gaps = 3/572 (1%)
NCBI
Show Blast
ABK00059.1 cytosolic glucose-6-phosphate isomerase [Marchantia polymorpha]
Evalue: 0.0 | Bitscore: 851
Identities = 406/568 (71%), Positives = 466/568 (82%), Gaps = 3/568 (1%)
NCBI
Show Blast

Gene Structure 

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Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

Alternative Models  

n/a
 

CDS  

Locus ID
Bathy13g00670
Redo Blast
CDS Length
1908 nucleotides
CDS Sequence

Protein 

Locus ID
Bathy13g00670
Redo Blast
Protein Length
636 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

View in GenomeView|View in Artemini


EST IDSuperContig_10.clus215.Contig1 Support ModelY More Info