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Bathycoccus prasinos


Gene ID
Bathy11g03870
Locus
Bathy11g03870
Functional Description
hypothetical protein CHLNCDRAFT_58754
Gene Type
protein-coding gene
Contig
bathy_chrom_11
Last Modified On
12 July 2011 21h39
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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pico-PLAZA - lookup this gene in the PLAZA resource

Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
hypothetical protein CHLNCDRAFT_58754
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

n/a
 

Protein Domains 


Domain IDDescriptionDatabase
PTHR12289 FAMILY NOT NAMED HMMPanther

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
XP_002503442.1 predicted protein [Micromonas sp. RCC299]
Evalue: 3e-19 | Bitscore: 100
Identities = 94/354 (27%), Positives = 165/354 (47%), Gaps = 45/354 (13%)		 NCBI
Show Blast
XP_003055686.1 predicted protein [Micromonas pusilla CCMP1545]
Evalue: 5e-14 | Bitscore: 83
Identities = 58/193 (30%), Positives = 90/193 (47%), Gaps = 16/193 (8%)		 NCBI
Show Blast
XP_001420036.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 1e-13 | Bitscore: 82
Identities = 66/258 (26%), Positives = 118/258 (46%), Gaps = 12/258 (5%)		 NCBI
Show Blast
XP_535974.1 PREDICTED: similar to Metaxin 2 [Canis familiaris]
Evalue: 4e-08 | Bitscore: 63
Identities = 48/174 (28%), Positives = 80/174 (46%), Gaps = 19/174 (11%)		 NCBI
Show Blast
XP_002812657.1 PREDICTED: metaxin-2-like isoform 1 [Pongo abelii]
Evalue: 4e-08 | Bitscore: 63
Identities = 48/174 (28%), Positives = 80/174 (46%), Gaps = 19/174 (11%)		 NCBI
Show Blast
XP_001095310.1 PREDICTED: metaxin-2 isoform 2 [Macaca mulatta]
Evalue: 4e-08 | Bitscore: 63
Identities = 48/174 (28%), Positives = 80/174 (46%), Gaps = 19/174 (11%)		 NCBI
Show Blast
XP_001153725.1 PREDICTED: metaxin 2 isoform 3 [Pan troglodytes]
Evalue: 4e-08 | Bitscore: 63
Identities = 48/174 (28%), Positives = 80/174 (46%), Gaps = 19/174 (11%)		 NCBI
Show Blast
BAH14289.1 unnamed protein product [Homo sapiens]
Evalue: 4e-08 | Bitscore: 63
Identities = 48/174 (28%), Positives = 80/174 (46%), Gaps = 19/174 (11%)		 NCBI
Show Blast
AAX93188.1 unknown [Homo sapiens]
Evalue: 4e-08 | Bitscore: 63
Identities = 48/174 (28%), Positives = 80/174 (46%), Gaps = 19/174 (11%)		 NCBI
Show Blast
XP_001153838.1 PREDICTED: metaxin 2 isoform 4 [Pan troglodytes]
Evalue: 4e-08 | Bitscore: 63
Identities = 48/174 (28%), Positives = 80/174 (46%), Gaps = 19/174 (11%)		 NCBI
Show Blast

Gene Structure 

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Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

Alternative Models  

n/a
 

CDS  

Locus ID
Bathy11g03870
Redo Blast
CDS Length
1059 nucleotides
CDS Sequence

Protein 

Locus ID
Bathy11g03870
Redo Blast
Protein Length
353 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

View in GenomeView|View in Artemini


EST IDSuperContig_9.clus361.Contig1 Support ModelN More Info
CommentEST is not matching the given gene model.