- Gene ID
- Bathy11g03840
- Locus
- Bathy11g03840
- Functional Description
- predicted protein
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_11
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- predicted protein
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
n/a
- Biological Process
-
1.
cell redox homeostasis
Protein Domains
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| XP_003055126.1 |
hypothetical protein MICPUCDRAFT_24412 [Micromonas pusilla CCMP1545]
Evalue: 2e-37 | Bitscore: 158
Identities = 72/127 (57%), Positives = 99/127 (78%), Gaps = 3/127 (2%) |
NCBI |
Show Blast
|
| XP_002503826.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 2e-32 | Bitscore: 142
Identities = 64/137 (47%), Positives = 94/137 (69%), Gaps = 4/137 (3%) |
NCBI |
Show Blast
|
| XP_001420219.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 3e-32 | Bitscore: 141
Identities = 68/123 (55%), Positives = 89/123 (72%), Gaps = 1/123 (1%) |
NCBI |
Show Blast
|
| ABK22271.1 |
unknown [Picea sitchensis]
Evalue: 7e-32 | Bitscore: 140
Identities = 61/119 (51%), Positives = 84/119 (71%), Gaps = 1/119 (1%) |
NCBI |
Show Blast
|
| ACN40500.1 |
unknown [Picea sitchensis]
Evalue: 7e-32 | Bitscore: 140
Identities = 61/119 (51%), Positives = 84/119 (71%), Gaps = 1/119 (1%) |
NCBI |
Show Blast
|
| XP_001697443.1 |
thioredoxin-like protein [Chlamydomonas reinhardtii]
Evalue: 9e-32 | Bitscore: 140
Identities = 60/122 (49%), Positives = 89/122 (73%), Gaps = 1/122 (1%) |
NCBI |
Show Blast
|
| Q8LEK4 |
Thioredoxin-like 2-1, chloroplastic OS=Arabidopsis thaliana GN=At4g26160 PE=2 SV=2
Evalue: 2e-32 | Bitscore: 138
Identities = 59/115 (51%), Positives = 81/115 (70%), Gaps = 1/115 (0%) |
SwissP |
Show Blast
|
| XP_002514101.1 |
Thioredoxin, putative [Ricinus communis]
Evalue: 3e-31 | Bitscore: 138
Identities = 59/128 (46%), Positives = 87/128 (68%), Gaps = 1/128 (1%) |
NCBI |
Show Blast
|
| XP_002309223.1 |
predicted protein [Populus trichocarpa]
Evalue: 3e-31 | Bitscore: 138
Identities = 57/119 (48%), Positives = 85/119 (71%), Gaps = 1/119 (1%) |
NCBI |
Show Blast
|
| Q5TKD8 |
Thioredoxin-like 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0200100 PE=2 SV=1
Evalue: 5e-32 | Bitscore: 137
Identities = 59/119 (49%), Positives = 86/119 (72%), Gaps = 1/119 (0%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| XP_003055126.1 |
hypothetical protein MICPUCDRAFT_24412 [Micromonas pusilla CCMP1545]
Evalue: 2e-37 | Bitscore: 158
Identities = 72/127 (57%), Positives = 99/127 (78%), Gaps = 3/127 (2%) |
NCBI |
Show Blast
|
| XP_002503826.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 2e-32 | Bitscore: 142
Identities = 64/137 (47%), Positives = 94/137 (69%), Gaps = 4/137 (3%) |
NCBI |
Show Blast
|
| XP_001420219.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 3e-32 | Bitscore: 141
Identities = 68/123 (55%), Positives = 89/123 (72%), Gaps = 1/123 (1%) |
NCBI |
Show Blast
|
| ABK22271.1 |
unknown [Picea sitchensis]
Evalue: 7e-32 | Bitscore: 140
Identities = 61/119 (51%), Positives = 84/119 (71%), Gaps = 1/119 (1%) |
NCBI |
Show Blast
|
| ACN40500.1 |
unknown [Picea sitchensis]
Evalue: 7e-32 | Bitscore: 140
Identities = 61/119 (51%), Positives = 84/119 (71%), Gaps = 1/119 (1%) |
NCBI |
Show Blast
|
| XP_001697443.1 |
thioredoxin-like protein [Chlamydomonas reinhardtii]
Evalue: 9e-32 | Bitscore: 140
Identities = 60/122 (49%), Positives = 89/122 (73%), Gaps = 1/122 (1%) |
NCBI |
Show Blast
|
| XP_002514101.1 |
Thioredoxin, putative [Ricinus communis]
Evalue: 3e-31 | Bitscore: 138
Identities = 59/128 (46%), Positives = 87/128 (68%), Gaps = 1/128 (1%) |
NCBI |
Show Blast
|
| XP_002309223.1 |
predicted protein [Populus trichocarpa]
Evalue: 3e-31 | Bitscore: 138
Identities = 57/119 (48%), Positives = 85/119 (71%), Gaps = 1/119 (1%) |
NCBI |
Show Blast
|
| XP_001771086.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 5e-31 | Bitscore: 137
Identities = 60/120 (50%), Positives = 87/120 (73%), Gaps = 1/120 (1%) |
NCBI |
Show Blast
|
| NP_194346.1 |
ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor [Arabidopsis
Evalue: 1e-30 | Bitscore: 136
Identities = 59/117 (50%), Positives = 82/117 (70%), Gaps = 1/117 (1%) |
NCBI |
Show Blast
|
| No hits found against database Self with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q8LEK4 |
Thioredoxin-like 2-1, chloroplastic OS=Arabidopsis thaliana GN=At4g26160 PE=2 SV=2
Evalue: 2e-32 | Bitscore: 138
Identities = 59/115 (51%), Positives = 81/115 (70%), Gaps = 1/115 (0%) |
SwissP |
Show Blast
|
| Q5TKD8 |
Thioredoxin-like 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0200100 PE=2 SV=1
Evalue: 5e-32 | Bitscore: 137
Identities = 59/119 (49%), Positives = 86/119 (72%), Gaps = 1/119 (0%) |
SwissP |
Show Blast
|
| Q8LCT3 |
Thioredoxin-like 2-2, chloroplastic OS=Arabidopsis thaliana GN=At4g29670 PE=2 SV=2
Evalue: 1e-28 | Bitscore: 125
Identities = 55/108 (50%), Positives = 77/108 (71%), Gaps = 2/108 (1%) |
SwissP |
Show Blast
|
| O64654 |
Thioredoxin-like 1-1, chloroplastic OS=Arabidopsis thaliana GN=At1g08570 PE=2 SV=1
Evalue: 2e-24 | Bitscore: 112
Identities = 52/126 (41%), Positives = 80/126 (63%), Gaps = 1/126 (0%) |
SwissP |
Show Blast
|
| Q10M18 |
Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0326500 PE=2 SV=1
Evalue: 2e-23 | Bitscore: 108
Identities = 50/130 (38%), Positives = 81/130 (62%), Gaps = 2/130 (1%) |
SwissP |
Show Blast
|
| O22779 |
Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana GN=At2g33270 PE=2 SV=1
Evalue: 1e-22 | Bitscore: 105
Identities = 48/140 (34%), Positives = 86/140 (61%), Gaps = 10/140 (7%) |
SwissP |
Show Blast
|
| Q6Z4N3 |
Thioredoxin-like 1-1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0684100 PE=2 SV=1
Evalue: 2e-22 | Bitscore: 105
Identities = 53/134 (39%), Positives = 83/134 (61%), Gaps = 4/134 (2%) |
SwissP |
Show Blast
|
| Q9XFI1 |
Thioredoxin-like 1-2, chloroplastic OS=Arabidopsis thaliana GN=At5g61440 PE=2 SV=1
Evalue: 8e-21 | Bitscore: 99
Identities = 44/119 (36%), Positives = 76/119 (63%), Gaps = 1/119 (0%) |
SwissP |
Show Blast
|
| Q8IFW4 |
Thioredoxin-T OS=Drosophila melanogaster GN=TrxT PE=1 SV=1
Evalue: 4e-11 | Bitscore: 67
Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 5/105 (4%) |
SwissP |
Show Blast
|
| Q9CM49 |
Thioredoxin OS=Pasteurella multocida GN=trxA PE=3 SV=1
Evalue: 4e-10 | Bitscore: 63
Identities = 26/69 (37%), Positives = 44/69 (63%) |
SwissP |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
| EST ID | SuperContig_9.clus580.Contig1 |
Support Model | Y |
More Info |
| Comment | EST is non-spliced and has no reliable strand information |
| Mapping Location | 719117..719562 |
Strand - |
|
