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Bathycoccus prasinos


Gene ID
Bathy11g03210
Locus
Bathy11g03210
Functional Description
predicted protein
Gene Type
protein-coding gene
Contig
bathy_chrom_11
Last Modified On
12 July 2011 21h39
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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pico-PLAZA - lookup this gene in the PLAZA resource

Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
predicted protein
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
n/a
Biological Process
1.
cell redox homeostasis

Protein Domains 


Domain IDDescriptionDatabase
IPR012335 Thioredoxin fold InterPro
PTHR22897 FAMILY NOT NAMED HMMPanther
IPR017905 ERV/ALR sulphydryl oxidase InterPro
IPR006863 Erv1/Alr InterPro
IPR017936 Thioredoxin-like InterPro
IPR013766 Thioredoxin domain InterPro
IPR017937 Thioredoxin, conserved site InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
XP_001602334.1 PREDICTED: similar to Quiescin-sulfhydryl oxidase4, putative [Nasonia vitripennis]
Evalue: 5e-26 | Bitscore: 124
Identities = 62/142 (44%), Positives = 85/142 (60%), Gaps = 5/142 (4%)		 NCBI
Show Blast
XP_002503790.1 predicted protein [Micromonas sp. RCC299]
Evalue: 5e-25 | Bitscore: 120
Identities = 66/169 (39%), Positives = 85/169 (50%), Gaps = 12/169 (7%)		 NCBI
Show Blast
EFZ17500.1 hypothetical protein SINV_08768 [Solenopsis invicta]
Evalue: 9e-24 | Bitscore: 117
Identities = 59/179 (33%), Positives = 92/179 (51%), Gaps = 20/179 (11%)		 NCBI
Show Blast
EFN69480.1 Sulfhydryl oxidase 2 [Camponotus floridanus]
Evalue: 1e-23 | Bitscore: 116
Identities = 59/175 (34%), Positives = 95/175 (54%), Gaps = 12/175 (7%)		 NCBI
Show Blast
XP_002001319.1 GI10722 [Drosophila mojavensis]
Evalue: 2e-23 | Bitscore: 116
Identities = 59/155 (38%), Positives = 88/155 (57%), Gaps = 9/155 (6%)		 NCBI
Show Blast
XP_002951917.1 hypothetical protein VOLCADRAFT_121037 [Volvox carteri f. nagariensis]
Evalue: 3e-23 | Bitscore: 114
Identities = 63/180 (35%), Positives = 94/180 (52%), Gaps = 9/180 (5%)		 NCBI
Show Blast
XP_002004713.1 GI19451 [Drosophila mojavensis]
Evalue: 5e-23 | Bitscore: 114
Identities = 59/161 (37%), Positives = 90/161 (56%), Gaps = 15/161 (9%)		 NCBI
Show Blast
XP_001961057.1 GF11199 [Drosophila ananassae]
Evalue: 1e-22 | Bitscore: 113
Identities = 59/146 (40%), Positives = 79/146 (54%), Gaps = 13/146 (9%)		 NCBI
Show Blast
Q6AX23 Sulfhydryl oxidase 2 OS=Xenopus laevis GN=qsox2 PE=2 SV=1
Evalue: 1e-23 | Bitscore: 112
Identities = 60/163 (36%), Positives = 85/163 (52%), Gaps = 32/163 (19%)		 SwissP
Show Blast
EFN87085.1 Sulfhydryl oxidase 1 [Harpegnathos saltator]
Evalue: 2e-22 | Bitscore: 112
Identities = 59/172 (34%), Positives = 91/172 (53%), Gaps = 13/172 (8%)		 NCBI
Show Blast

Gene Structure 

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Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

Alternative Models  

n/a
 

CDS  

Locus ID
Bathy11g03210
Redo Blast
CDS Length
1956 nucleotides
CDS Sequence

Protein 

Locus ID
Bathy11g03210
Redo Blast
Protein Length
652 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a