- Gene ID
- Bathy11g02200
- Locus
- Bathy11g02200
- Functional Description
- predicted protein
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_11
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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pico-PLAZA - lookup this gene in the PLAZA resource |
Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- predicted protein
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
Domain ID | Description | Database |
IPR006668 |
Magnesium transporter, MgtE intracellular domain |
InterPro |
G3DSA:1.25.60.10 |
no description |
Gene3D |
IPR001298 |
Filamin/ABP280 repeat |
InterPro |
IPR013783 |
Immunoglobulin-like fold |
InterPro |
IPR017868 |
Filamin/ABP280 repeat-like |
InterPro |
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
XP_003081643.1 |
filamin (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1945 Identities = 1088/2317 (47%), Positives = 1453/2317 (63%), Gaps = 163/2317 (7%) |
NCBI |
Show Blast
|
XP_002503840.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 1711 Identities = 972/2126 (46%), Positives = 1295/2126 (61%), Gaps = 162/2126 (8%) |
NCBI |
Show Blast
|
XP_001419978.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 2e-20 | Bitscore: 108 Identities = 80/176 (45%), Positives = 106/176 (60%), Gaps = 21/176 (12%) |
NCBI |
Show Blast
|
EGC39028.1 |
hypothetical protein DICPUDRAFT_91322 [Dictyostelium purpureum]
Evalue: 4e-20 | Bitscore: 108 Identities = 140/542 (26%), Positives = 218/542 (40%), Gaps = 55/542 (10%) |
NCBI |
Show Blast
|
XP_002677307.1 |
ras GTPase-activating-like protein IQGAP3 [Naegleria gruberi]
Evalue: 6e-17 | Bitscore: 97 Identities = 102/424 (24%), Positives = 172/424 (41%), Gaps = 47/424 (11%) |
NCBI |
Show Blast
|
XP_003055106.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 8e-15 | Bitscore: 90 Identities = 43/85 (51%), Positives = 57/85 (67%), Gaps = 0/85 (0%) |
NCBI |
Show Blast
|
CCA24582.1 |
conserved hypothetical protein [Albugo laibachii Nc14]
Evalue: 2e-13 | Bitscore: 86 Identities = 137/603 (23%), Positives = 234/603 (39%), Gaps = 88/603 (15%) |
NCBI |
Show Blast
|
P13466 |
Gelation factor OS=Dictyostelium discoideum GN=abpC PE=1 SV=1
Evalue: 2e-14 | Bitscore: 84 Identities = 148/615 (24%), Positives = 235/615 (38%), Gaps = 84/615 (13%) |
SwissP |
Show Blast
|
EFA84721.1 |
gelation factor [Polysphondylium pallidum PN500]
Evalue: 6e-13 | Bitscore: 84 Identities = 116/513 (23%), Positives = 186/513 (36%), Gaps = 57/513 (11%) |
NCBI |
Show Blast
|
XP_002905239.1 |
conserved hypothetical protein [Phytophthora infestans T30-4]
Evalue: 2e-10 | Bitscore: 75 Identities = 95/370 (26%), Positives = 155/370 (42%), Gaps = 41/370 (11%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
XP_003081643.1 |
filamin (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1945 Identities = 1088/2317 (47%), Positives = 1453/2317 (63%), Gaps = 163/2317 (7%) |
NCBI |
Show Blast
|
XP_002503840.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 1711 Identities = 972/2126 (46%), Positives = 1295/2126 (61%), Gaps = 162/2126 (8%) |
NCBI |
Show Blast
|
XP_001419978.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 2e-20 | Bitscore: 108 Identities = 80/176 (45%), Positives = 106/176 (60%), Gaps = 21/176 (12%) |
NCBI |
Show Blast
|
EGC39028.1 |
hypothetical protein DICPUDRAFT_91322 [Dictyostelium purpureum]
Evalue: 4e-20 | Bitscore: 108 Identities = 140/542 (26%), Positives = 218/542 (40%), Gaps = 55/542 (10%) |
NCBI |
Show Blast
|
XP_002677307.1 |
ras GTPase-activating-like protein IQGAP3 [Naegleria gruberi]
Evalue: 6e-17 | Bitscore: 97 Identities = 102/424 (24%), Positives = 172/424 (41%), Gaps = 47/424 (11%) |
NCBI |
Show Blast
|
XP_003055106.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 8e-15 | Bitscore: 90 Identities = 43/85 (51%), Positives = 57/85 (67%), Gaps = 0/85 (0%) |
NCBI |
Show Blast
|
CCA24582.1 |
conserved hypothetical protein [Albugo laibachii Nc14]
Evalue: 2e-13 | Bitscore: 86 Identities = 137/603 (23%), Positives = 234/603 (39%), Gaps = 88/603 (15%) |
NCBI |
Show Blast
|
EFA84721.1 |
gelation factor [Polysphondylium pallidum PN500]
Evalue: 6e-13 | Bitscore: 84 Identities = 116/513 (23%), Positives = 186/513 (36%), Gaps = 57/513 (11%) |
NCBI |
Show Blast
|
XP_002905239.1 |
conserved hypothetical protein [Phytophthora infestans T30-4]
Evalue: 2e-10 | Bitscore: 75 Identities = 95/370 (26%), Positives = 155/370 (42%), Gaps = 41/370 (11%) |
NCBI |
Show Blast
|
NP_989904.1 |
cgABP260 [Gallus gallus]
Evalue: 6e-10 | Bitscore: 73 Identities = 189/743 (25%), Positives = 261/743 (35%), Gaps = 158/743 (21%) |
NCBI |
Show Blast
|
No hits found against database Self with an e-value better than 1e-3. |
ProteinID | Description / BlastScore | Database | Actions |
P13466 |
Gelation factor OS=Dictyostelium discoideum GN=abpC PE=1 SV=1
Evalue: 2e-14 | Bitscore: 84 Identities = 148/615 (24%), Positives = 235/615 (38%), Gaps = 84/615 (13%) |
SwissP |
Show Blast
|
O75369 |
Filamin-B OS=Homo sapiens GN=FLNB PE=1 SV=2
Evalue: 2e-10 | Bitscore: 71 Identities = 128/554 (23%), Positives = 211/554 (38%), Gaps = 73/554 (13%) |
SwissP |
Show Blast
|
Q8VHX6 |
Filamin-C OS=Mus musculus GN=Flnc PE=1 SV=3
Evalue: 3e-08 | Bitscore: 63 Identities = 173/767 (22%), Positives = 269/767 (35%), Gaps = 152/767 (19%) |
SwissP |
Show Blast
|
P21333 |
Filamin-A OS=Homo sapiens GN=FLNA PE=1 SV=4
Evalue: 4e-08 | Bitscore: 63 Identities = 118/494 (23%), Positives = 195/494 (39%), Gaps = 95/494 (19%) |
SwissP |
Show Blast
|
Q80X90 |
Filamin-B OS=Mus musculus GN=Flnb PE=1 SV=2
Evalue: 1e-07 | Bitscore: 62 Identities = 114/488 (23%), Positives = 181/488 (37%), Gaps = 70/488 (14%) |
SwissP |
Show Blast
|
Q8BTM8 |
Filamin-A OS=Mus musculus GN=Flna PE=1 SV=4
Evalue: 1e-07 | Bitscore: 62 Identities = 118/492 (23%), Positives = 193/492 (39%), Gaps = 91/492 (18%) |
SwissP |
Show Blast
|
Q14315 |
Filamin-C OS=Homo sapiens GN=FLNC PE=1 SV=3
Evalue: 3e-07 | Bitscore: 60 Identities = 172/767 (22%), Positives = 267/767 (34%), Gaps = 152/767 (19%) |
SwissP |
Show Blast
|
Q5BIM1 |
Tripartite motif-containing protein 45 OS=Bos taurus GN=TRIM45 PE=2 SV=1
Evalue: 3e-05 | Bitscore: 54 Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 15/127 (11%) |
SwissP |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
EST ID | SuperContig_9.clus363.Contig1 |
Support Model | Y |
More Info |
Mapping Location | 410376..410656 |
Strand + |
EST ID | SuperContig_9.clus615.Contig1 |
Support Model | Y |
More Info |
Mapping Location | 412414..412742 |
Strand + |
EST ID | SuperContig_9.clus427.Contig1 |
Support Model | Y |
More Info |
Mapping Location | 412862..413271 |
Strand + |
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