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Bathycoccus prasinos


Gene ID
Bathy11g01870
Locus
Bathy11g01870
Functional Description
serine/threonine protein phosphatase
Gene Type
protein-coding gene
Contig
bathy_chrom_11
Last Modified On
12 July 2011 21h39
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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pico-PLAZA - lookup this gene in the PLAZA resource

Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
serine/threonine protein phosphatase
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
1.
hydrolase activity

Biological Process
n/a

Protein Domains 


Domain IDDescriptionDatabase
IPR004843 Metallo-dependent phosphatase InterPro
IPR018247 EF-Hand 1, calcium-binding site InterPro
IPR011992 EF-hand-like domain InterPro
IPR002048 Calcium-binding EF-hand InterPro
SSF47473 EF-hand superfamily
G3DSA:3.60.21.10 no description Gene3D
PTHR11668 FAMILY NOT NAMED HMMPanther
IPR018249 EF-HAND 2 InterPro
IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
XP_003081619.1 CG6571-PB, isoform B (ISS) [Ostreococcus tauri]
Evalue: 4e-67 | Bitscore: 261
Identities = 137/329 (42%), Positives = 196/329 (60%), Gaps = 31/329 (9%)
NCBI
Show Blast
XP_002500188.1 calcineurin-like phosphoesterase [Micromonas sp. RCC299]
Evalue: 4e-59 | Bitscore: 234
Identities = 127/333 (38%), Positives = 194/333 (58%), Gaps = 33/333 (10%)
NCBI
Show Blast
XP_003057749.1 calcineurin-like phosphoesterase [Micromonas pusilla CCMP1545]
Evalue: 1e-51 | Bitscore: 210
Identities = 97/200 (49%), Positives = 130/200 (65%), Gaps = 8/200 (4%)
NCBI
Show Blast
XP_001419965.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 2e-43 | Bitscore: 182
Identities = 94/182 (52%), Positives = 126/182 (69%), Gaps = 3/182 (2%)
NCBI
Show Blast
XP_002899950.1 calcineurin-like phosphoesterase [Phytophthora infestans T30-4]
Evalue: 3e-33 | Bitscore: 149
Identities = 79/214 (37%), Positives = 125/214 (58%), Gaps = 8/214 (4%)
NCBI
Show Blast
CBH09097.1 ser/thr protein phosphatase, putative [Trypanosoma brucei gambiense DAL972]
Evalue: 4e-33 | Bitscore: 148
Identities = 99/328 (30%), Positives = 164/328 (50%), Gaps = 25/328 (8%)
NCBI
Show Blast
XP_001219099.1 Ser/Thr protein phosphatase [Trypanosoma brucei TREU927]
Evalue: 6e-33 | Bitscore: 148
Identities = 99/328 (30%), Positives = 164/328 (50%), Gaps = 25/328 (8%)
NCBI
Show Blast
EFZ24762.1 serine/threonine protein phosphatase, putative [Trypanosoma cruzi]
Evalue: 1e-32 | Bitscore: 146
Identities = 91/273 (33%), Positives = 145/273 (53%), Gaps = 20/273 (7%)
NCBI
Show Blast
AAN78342.1 TcC31.31 [Trypanosoma cruzi]
Evalue: 1e-32 | Bitscore: 146
Identities = 91/273 (33%), Positives = 145/273 (53%), Gaps = 20/273 (7%)
NCBI
Show Blast
XP_820873.1 serine/threonine protein phosphatase [Trypanosoma cruzi strain CL Brener]
Evalue: 2e-32 | Bitscore: 146
Identities = 91/273 (33%), Positives = 145/273 (53%), Gaps = 20/273 (7%)
NCBI
Show Blast

Gene Structure 

View in GenomeView|View in Artemini


Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
+
Structure Quality
2

Alternative Models  

n/a
 

CDS  

Locus ID
Bathy11g01870
Redo Blast
CDS Length
2910 nucleotides
CDS Sequence

Protein 

Locus ID
Bathy11g01870
Redo Blast
Protein Length
970 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a