- Gene ID
- Bathy11g00360
- Locus
- Bathy11g00360
- Functional Description
- thioredoxin
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_11
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- thioredoxin
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EFV58185.1 |
thioredoxin-1 [Trichinella spiralis]
Evalue: 2e-17 | Bitscore: 94
Identities = 46/124 (37%), Positives = 80/124 (65%), Gaps = 5/124 (4%) |
NCBI |
Show Blast
|
| XP_002504684.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 4e-16 | Bitscore: 90
Identities = 45/122 (37%), Positives = 68/122 (56%), Gaps = 1/122 (1%) |
NCBI |
Show Blast
|
| ZP_05033377.1 |
Thioredoxin domain protein [Brevundimonas sp. BAL3]
Evalue: 7e-16 | Bitscore: 89
Identities = 60/181 (33%), Positives = 89/181 (49%), Gaps = 26/181 (14%) |
NCBI |
Show Blast
|
| YP_002500337.1 |
thioredoxin [Methylobacterium nodulans ORS 2060]
Evalue: 7e-16 | Bitscore: 89
Identities = 36/89 (40%), Positives = 57/89 (64%), Gaps = 0/89 (0%) |
NCBI |
Show Blast
|
| YP_004140128.1 |
thioredoxin [Mesorhizobium ciceri biovar biserrulae WSM1271]
Evalue: 9e-16 | Bitscore: 89
Identities = 36/93 (39%), Positives = 58/93 (62%), Gaps = 0/93 (0%) |
NCBI |
Show Blast
|
| NP_105303.1 |
thioredoxin [Mesorhizobium loti MAFF303099]
Evalue: 1e-15 | Bitscore: 89
Identities = 36/93 (39%), Positives = 57/93 (61%), Gaps = 0/93 (0%) |
NCBI |
Show Blast
|
| ZP_05124273.1 |
thioredoxin [Rhodobacteraceae bacterium KLH11]
Evalue: 1e-15 | Bitscore: 89
Identities = 63/203 (31%), Positives = 97/203 (48%), Gaps = 8/203 (4%) |
NCBI |
Show Blast
|
| ZP_05813862.1 |
thioredoxin [Mesorhizobium opportunistum WSM2075]
Evalue: 1e-15 | Bitscore: 88
Identities = 36/93 (39%), Positives = 57/93 (61%), Gaps = 0/93 (0%) |
NCBI |
Show Blast
|
| NP_945620.1 |
thioredoxin [Rhodopseudomonas palustris CGA009]
Evalue: 2e-15 | Bitscore: 88
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 18/203 (9%) |
NCBI |
Show Blast
|
| ZP_05063101.1 |
thioredoxin [Octadecabacter antarcticus 238]
Evalue: 3e-15 | Bitscore: 87
Identities = 47/124 (38%), Positives = 66/124 (53%), Gaps = 9/124 (7%) |
NCBI |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| EFV58185.1 |
thioredoxin-1 [Trichinella spiralis]
Evalue: 2e-17 | Bitscore: 94
Identities = 46/124 (37%), Positives = 80/124 (65%), Gaps = 5/124 (4%) |
NCBI |
Show Blast
|
| XP_002504684.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 4e-16 | Bitscore: 90
Identities = 45/122 (37%), Positives = 68/122 (56%), Gaps = 1/122 (1%) |
NCBI |
Show Blast
|
| ZP_05033377.1 |
Thioredoxin domain protein [Brevundimonas sp. BAL3]
Evalue: 7e-16 | Bitscore: 89
Identities = 60/181 (33%), Positives = 89/181 (49%), Gaps = 26/181 (14%) |
NCBI |
Show Blast
|
| YP_002500337.1 |
thioredoxin [Methylobacterium nodulans ORS 2060]
Evalue: 7e-16 | Bitscore: 89
Identities = 36/89 (40%), Positives = 57/89 (64%), Gaps = 0/89 (0%) |
NCBI |
Show Blast
|
| YP_004140128.1 |
thioredoxin [Mesorhizobium ciceri biovar biserrulae WSM1271]
Evalue: 9e-16 | Bitscore: 89
Identities = 36/93 (39%), Positives = 58/93 (62%), Gaps = 0/93 (0%) |
NCBI |
Show Blast
|
| NP_105303.1 |
thioredoxin [Mesorhizobium loti MAFF303099]
Evalue: 1e-15 | Bitscore: 89
Identities = 36/93 (39%), Positives = 57/93 (61%), Gaps = 0/93 (0%) |
NCBI |
Show Blast
|
| ZP_05124273.1 |
thioredoxin [Rhodobacteraceae bacterium KLH11]
Evalue: 1e-15 | Bitscore: 89
Identities = 63/203 (31%), Positives = 97/203 (48%), Gaps = 8/203 (4%) |
NCBI |
Show Blast
|
| ZP_05813862.1 |
thioredoxin [Mesorhizobium opportunistum WSM2075]
Evalue: 1e-15 | Bitscore: 88
Identities = 36/93 (39%), Positives = 57/93 (61%), Gaps = 0/93 (0%) |
NCBI |
Show Blast
|
| NP_945620.1 |
thioredoxin [Rhodopseudomonas palustris CGA009]
Evalue: 2e-15 | Bitscore: 88
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 18/203 (9%) |
NCBI |
Show Blast
|
| ZP_05063101.1 |
thioredoxin [Octadecabacter antarcticus 238]
Evalue: 3e-15 | Bitscore: 87
Identities = 47/124 (38%), Positives = 66/124 (53%), Gaps = 9/124 (7%) |
NCBI |
Show Blast
|
| No hits found against database Self with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| Q99757 |
Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2 PE=1 SV=2
Evalue: 1e-14 | Bitscore: 80
Identities = 38/102 (37%), Positives = 64/102 (62%), Gaps = 2/102 (1%) |
SwissP |
Show Blast
|
| P97615 |
Thioredoxin, mitochondrial OS=Rattus norvegicus GN=Txn2 PE=2 SV=1
Evalue: 2e-14 | Bitscore: 80
Identities = 37/102 (36%), Positives = 64/102 (62%), Gaps = 2/102 (1%) |
SwissP |
Show Blast
|
| Q95108 |
Thioredoxin, mitochondrial OS=Bos taurus GN=TXN2 PE=1 SV=2
Evalue: 2e-14 | Bitscore: 80
Identities = 38/102 (37%), Positives = 64/102 (62%), Gaps = 2/102 (1%) |
SwissP |
Show Blast
|
| P97493 |
Thioredoxin, mitochondrial OS=Mus musculus GN=Txn2 PE=2 SV=1
Evalue: 2e-14 | Bitscore: 80
Identities = 37/102 (36%), Positives = 64/102 (62%), Gaps = 2/102 (1%) |
SwissP |
Show Blast
|
| Q17424 |
Probable thioredoxin-2 OS=Caenorhabditis elegans GN=trx-2 PE=2 SV=2
Evalue: 1e-12 | Bitscore: 74
Identities = 42/132 (31%), Positives = 75/132 (56%), Gaps = 9/132 (6%) |
SwissP |
Show Blast
|
| O84544 |
Thioredoxin OS=Chlamydia trachomatis GN=trxA PE=3 SV=1
Evalue: 4e-11 | Bitscore: 69
Identities = 34/83 (40%), Positives = 54/83 (65%), Gaps = 1/83 (1%) |
SwissP |
Show Blast
|
| P52232 |
Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC 6803) GN=slr0233 PE=3 SV=1
Evalue: 4e-11 | Bitscore: 69
Identities = 28/73 (38%), Positives = 46/73 (63%) |
SwissP |
Show Blast
|
| Q9PJK3 |
Thioredoxin OS=Chlamydia muridarum GN=trxA PE=3 SV=1
Evalue: 4e-11 | Bitscore: 69
Identities = 32/83 (38%), Positives = 54/83 (65%), Gaps = 1/83 (1%) |
SwissP |
Show Blast
|
| Q9R6P9 |
Thioredoxin OS=Mycoplasma gallisepticum GN=trxA PE=3 SV=2
Evalue: 8e-11 | Bitscore: 68
Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 4/104 (3%) |
SwissP |
Show Blast
|
| P59527 |
Thioredoxin OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) GN=trxA PE=3 SV=1
Evalue: 2e-10 | Bitscore: 67
Identities = 28/84 (33%), Positives = 49/84 (58%) |
SwissP |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
| EST ID | SuperContig_9.clus96.Contig1 |
Support Model | Y |
More Info |
| Mapping Location | 59035..59271 |
Strand - |
|
