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Bathycoccus prasinos


Gene ID
Bathy10g03070
Locus
Bathy10g03070
Functional Description
unknown protein
Gene Type
protein-coding gene
Contig
bathy_chrom_10
Last Modified On
12 July 2011 21h39
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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pico-PLAZA - lookup this gene in the PLAZA resource

Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
unknown protein
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
n/a
Biological Process
1.
cell redox homeostasis

Protein Domains 


Domain IDDescriptionDatabase
IPR005746 Thioredoxin InterPro
IPR012335 Thioredoxin fold InterPro
IPR017936 Thioredoxin-like InterPro
PTHR18929 FAMILY NOT NAMED HMMPanther
IPR013766 Thioredoxin domain InterPro
IPR017937 Thioredoxin, conserved site InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
ACU19398.1 unknown [Glycine max]
Evalue: 1e-05 | Bitscore: 56
Identities = 39/138 (28%), Positives = 56/138 (41%), Gaps = 44/138 (32%)		 NCBI
Show Blast
CBJ29913.1 protein disulfide isomerase [Ectocarpus siliculosus]
Evalue: 2e-05 | Bitscore: 55
Identities = 60/234 (26%), Positives = 94/234 (40%), Gaps = 66/234 (28%)		 NCBI
Show Blast
CBG91901.1 putative PDI-like protein [Triticum aestivum]
Evalue: 4e-05 | Bitscore: 54
Identities = 63/234 (27%), Positives = 87/234 (37%), Gaps = 69/234 (29%)		 NCBI
Show Blast
NP_001105803.1 protein disulfide isomerase11 [Zea mays]
Evalue: 4e-05 | Bitscore: 54
Identities = 61/234 (26%), Positives = 86/234 (37%), Gaps = 69/234 (29%)		 NCBI
Show Blast
CBG91914.1 putative PDI-like protein [Triticum aestivum]
Evalue: 4e-05 | Bitscore: 54
Identities = 63/234 (27%), Positives = 87/234 (37%), Gaps = 69/234 (29%)		 NCBI
Show Blast
ABO41838.1 putative protein disulfide isomerase [Gossypium arboreum]
Evalue: 5e-05 | Bitscore: 54
Identities = 42/148 (28%), Positives = 58/148 (39%), Gaps = 46/148 (31%)		 NCBI
Show Blast
CBG91912.1 putative PDI-like protein [Triticum aestivum]
Evalue: 5e-05 | Bitscore: 54
Identities = 63/234 (27%), Positives = 87/234 (37%), Gaps = 69/234 (29%)		 NCBI
Show Blast
ABO41851.1 putative protein disulfide isomerase [Gossypium hirsutum]
Evalue: 5e-05 | Bitscore: 54
Identities = 42/148 (28%), Positives = 58/148 (39%), Gaps = 46/148 (31%)		 NCBI
Show Blast
ABO41832.1 putative protein disulfide isomerase [Gossypium raimondii]
Evalue: 6e-05 | Bitscore: 54
Identities = 42/148 (28%), Positives = 58/148 (39%), Gaps = 46/148 (31%)		 NCBI
Show Blast
ACF06590.1 protein disulfide isomerase 2 precursor [Elaeis guineensis]
Evalue: 7e-05 | Bitscore: 53
Identities = 45/160 (28%), Positives = 60/160 (38%), Gaps = 46/160 (29%)		 NCBI
Show Blast

Gene Structure 

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Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

Alternative Models  

n/a
 

CDS  

Locus ID
Bathy10g03070
Redo Blast
CDS Length
1815 nucleotides
CDS Sequence

Protein 

Locus ID
Bathy10g03070
Redo Blast
Protein Length
605 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a