- Gene ID
- Bathy10g02410
- Locus
- Bathy10g02410
- Functional Description
- predicted protein
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_10
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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pico-PLAZA - lookup this gene in the PLAZA resource |
Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- predicted protein
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
Domain ID | Description | Database |
IPR003609 |
Apple-like |
InterPro |
IPR018247 |
EF-Hand 1, calcium-binding site |
InterPro |
IPR003014 |
PAN-1 domain |
InterPro |
IPR011889 |
Bacterial surface protein 26-residue repeat |
InterPro |
IPR005046 |
Protein of unknown function DUF285, lipoprotein predicted |
InterPro |
SSF57414 |
Hairpin loop containing domain-like |
superfamily |
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
XP_003063611.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 1e-78 | Bitscore: 301 Identities = 166/355 (47%), Positives = 207/355 (58%), Gaps = 13/355 (4%) |
NCBI |
Show Blast
|
XP_003060637.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 2e-78 | Bitscore: 301 Identities = 167/363 (46%), Positives = 204/363 (56%), Gaps = 25/363 (7%) |
NCBI |
Show Blast
|
XP_003057609.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 2e-78 | Bitscore: 301 Identities = 171/346 (49%), Positives = 212/346 (61%), Gaps = 29/346 (8%) |
NCBI |
Show Blast
|
XP_002509285.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 2e-78 | Bitscore: 301 Identities = 175/352 (50%), Positives = 212/352 (60%), Gaps = 10/352 (3%) |
NCBI |
Show Blast
|
XP_003060638.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 1e-74 | Bitscore: 288 Identities = 161/345 (47%), Positives = 202/345 (59%), Gaps = 26/345 (8%) |
NCBI |
Show Blast
|
YP_003569744.1 |
Conserved hypothetical protein containing Fibronectin, type III domain [Salinibacter ruber M8]
Evalue: 2e-73 | Bitscore: 284 Identities = 168/390 (43%), Positives = 213/390 (55%), Gaps = 30/390 (8%) |
NCBI |
Show Blast
|
XP_003056257.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 8e-71 | Bitscore: 276 Identities = 180/466 (39%), Positives = 226/466 (48%), Gaps = 101/466 (22%) |
NCBI |
Show Blast
|
XP_002502684.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 1e-69 | Bitscore: 271 Identities = 171/354 (48%), Positives = 196/354 (55%), Gaps = 38/354 (11%) |
NCBI |
Show Blast
|
XP_002501254.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 6e-69 | Bitscore: 269 Identities = 163/361 (45%), Positives = 207/361 (57%), Gaps = 31/361 (9%) |
NCBI |
Show Blast
|
XP_002502681.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 3e-67 | Bitscore: 264 Identities = 165/375 (44%), Positives = 190/375 (51%), Gaps = 55/375 (15%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
XP_003063611.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 1e-78 | Bitscore: 301 Identities = 166/355 (47%), Positives = 207/355 (58%), Gaps = 13/355 (4%) |
NCBI |
Show Blast
|
XP_003060637.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 2e-78 | Bitscore: 301 Identities = 167/363 (46%), Positives = 204/363 (56%), Gaps = 25/363 (7%) |
NCBI |
Show Blast
|
XP_003057609.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 2e-78 | Bitscore: 301 Identities = 171/346 (49%), Positives = 212/346 (61%), Gaps = 29/346 (8%) |
NCBI |
Show Blast
|
XP_002509285.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 2e-78 | Bitscore: 301 Identities = 175/352 (50%), Positives = 212/352 (60%), Gaps = 10/352 (3%) |
NCBI |
Show Blast
|
XP_003060638.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 1e-74 | Bitscore: 288 Identities = 161/345 (47%), Positives = 202/345 (59%), Gaps = 26/345 (8%) |
NCBI |
Show Blast
|
YP_003569744.1 |
Conserved hypothetical protein containing Fibronectin, type III domain [Salinibacter ruber M8]
Evalue: 2e-73 | Bitscore: 284 Identities = 168/390 (43%), Positives = 213/390 (55%), Gaps = 30/390 (8%) |
NCBI |
Show Blast
|
XP_003056257.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 8e-71 | Bitscore: 276 Identities = 180/466 (39%), Positives = 226/466 (48%), Gaps = 101/466 (22%) |
NCBI |
Show Blast
|
XP_002502684.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 1e-69 | Bitscore: 271 Identities = 171/354 (48%), Positives = 196/354 (55%), Gaps = 38/354 (11%) |
NCBI |
Show Blast
|
XP_002501254.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 6e-69 | Bitscore: 269 Identities = 163/361 (45%), Positives = 207/361 (57%), Gaps = 31/361 (9%) |
NCBI |
Show Blast
|
XP_002502681.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 3e-67 | Bitscore: 264 Identities = 165/375 (44%), Positives = 190/375 (51%), Gaps = 55/375 (15%) |
NCBI |
Show Blast
|
No hits found against database Self with an e-value better than 1e-3. |
No hits found against database SwissP with an e-value better than 1e-3. |
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
EST ID | SuperContig_8.clus8.Contig1 |
Support Model | Y |
More Info |
Mapping Location | 436459..436903 |
Strand - |
|