- Gene ID
- Bathy10g01780
- Locus
- Bathy10g01780
- Functional Description
- predicted protein
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_10
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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pico-PLAZA - lookup this gene in the PLAZA resource |
Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- predicted protein
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
Domain ID | Description | Database |
IPR018247 |
EF-Hand 1, calcium-binding site |
InterPro |
IPR018249 |
EF-HAND 2 |
InterPro |
PTHR13890 |
FAMILY NOT NAMED |
HMMPanther |
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
XP_002505988.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 2e-18 | Bitscore: 99 Identities = 153/508 (30%), Positives = 222/508 (44%), Gaps = 116/508 (23%) |
NCBI |
Show Blast
|
XP_001419796.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 1e-13 | Bitscore: 83 Identities = 111/398 (28%), Positives = 184/398 (46%), Gaps = 48/398 (12%) |
NCBI |
Show Blast
|
XP_003081263.1 |
unnamed protein product [Ostreococcus tauri]
Evalue: 1e-12 | Bitscore: 79 Identities = 126/479 (26%), Positives = 208/479 (43%), Gaps = 93/479 (19%) |
NCBI |
Show Blast
|
XP_003057162.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 2e-07 | Bitscore: 62 Identities = 83/228 (36%), Positives = 118/228 (52%), Gaps = 32/228 (14%) |
NCBI |
Show Blast
|
XP_001775893.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 5e-07 | Bitscore: 60 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 12/199 (6%) |
NCBI |
Show Blast
|
XP_002993850.1 |
hypothetical protein SELMODRAFT_431872 [Selaginella moellendorffii]
Evalue: 4e-05 | Bitscore: 54 Identities = 90/354 (25%), Positives = 148/354 (42%), Gaps = 43/354 (12%) |
NCBI |
Show Blast
|
EFN55977.1 |
hypothetical protein CHLNCDRAFT_145324 [Chlorella variabilis]
Evalue: 6e-05 | Bitscore: 53 Identities = 74/304 (24%), Positives = 133/304 (44%), Gaps = 32/304 (11%) |
NCBI |
Show Blast
|
XP_002991413.1 |
hypothetical protein SELMODRAFT_429777 [Selaginella moellendorffii]
Evalue: 0.0002 | Bitscore: 52 Identities = 65/215 (30%), Positives = 100/215 (47%), Gaps = 27/215 (13%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
XP_002505988.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 2e-18 | Bitscore: 99 Identities = 153/508 (30%), Positives = 222/508 (44%), Gaps = 116/508 (23%) |
NCBI |
Show Blast
|
XP_001419796.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 1e-13 | Bitscore: 83 Identities = 111/398 (28%), Positives = 184/398 (46%), Gaps = 48/398 (12%) |
NCBI |
Show Blast
|
XP_003081263.1 |
unnamed protein product [Ostreococcus tauri]
Evalue: 1e-12 | Bitscore: 79 Identities = 126/479 (26%), Positives = 208/479 (43%), Gaps = 93/479 (19%) |
NCBI |
Show Blast
|
XP_003057162.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 2e-07 | Bitscore: 62 Identities = 83/228 (36%), Positives = 118/228 (52%), Gaps = 32/228 (14%) |
NCBI |
Show Blast
|
XP_001775893.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 5e-07 | Bitscore: 60 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 12/199 (6%) |
NCBI |
Show Blast
|
XP_002993850.1 |
hypothetical protein SELMODRAFT_431872 [Selaginella moellendorffii]
Evalue: 4e-05 | Bitscore: 54 Identities = 90/354 (25%), Positives = 148/354 (42%), Gaps = 43/354 (12%) |
NCBI |
Show Blast
|
EFN55977.1 |
hypothetical protein CHLNCDRAFT_145324 [Chlorella variabilis]
Evalue: 6e-05 | Bitscore: 53 Identities = 74/304 (24%), Positives = 133/304 (44%), Gaps = 32/304 (11%) |
NCBI |
Show Blast
|
XP_002991413.1 |
hypothetical protein SELMODRAFT_429777 [Selaginella moellendorffii]
Evalue: 0.0002 | Bitscore: 52 Identities = 65/215 (30%), Positives = 100/215 (47%), Gaps = 27/215 (13%) |
NCBI |
Show Blast
|
No hits found against database Self with an e-value better than 1e-3. |
No hits found against database SwissP with an e-value better than 1e-3. |
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
- n/a
-
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