- Gene ID
- Bathy10g01110
- Locus
- Bathy10g01110
- Functional Description
- predicted protein
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_10
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Link Out
pico-PLAZA - lookup this gene in the PLAZA resource |
Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- predicted protein
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- Cellular Component
-
n/a
- Molecular Function
-
1.
calcium ion binding
- Biological Process
-
n/a
Protein Domains
Domain ID | Description | Database |
IPR018247 |
EF-Hand 1, calcium-binding site |
InterPro |
IPR001841 |
Zinc finger, RING-type |
InterPro |
IPR018249 |
EF-HAND 2 |
InterPro |
IPR013083 |
Zinc finger, RING/FYVE/PHD-type |
InterPro |
PTHR10891 |
EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN |
HMMPanther |
IPR011992 |
EF-hand-like domain |
InterPro |
IPR002048 |
Calcium-binding EF-hand |
InterPro |
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
XP_001419823.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 3e-43 | Bitscore: 181 Identities = 100/297 (34%), Positives = 156/297 (53%), Gaps = 56/297 (19%) |
NCBI |
Show Blast
|
XP_003081333.1 |
unnamed protein product [Ostreococcus tauri]
Evalue: 2e-39 | Bitscore: 168 Identities = 99/345 (29%), Positives = 166/345 (48%), Gaps = 69/345 (20%) |
NCBI |
Show Blast
|
XP_002502215.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 1e-38 | Bitscore: 165 Identities = 87/194 (45%), Positives = 128/194 (66%), Gaps = 6/194 (3%) |
NCBI |
Show Blast
|
XP_002768532.1 |
hypothetical protein Pmar_PMAR020156 [Perkinsus marinus ATCC 50983]
Evalue: 7e-25 | Bitscore: 119 Identities = 86/300 (29%), Positives = 134/300 (45%), Gaps = 64/300 (21%) |
NCBI |
Show Blast
|
EGB09898.1 |
hypothetical protein AURANDRAFT_62958 [Aureococcus anophagefferens]
Evalue: 1e-23 | Bitscore: 115 Identities = 68/199 (34%), Positives = 105/199 (53%), Gaps = 10/199 (5%) |
NCBI |
Show Blast
|
XP_003059537.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 8e-14 | Bitscore: 83 Identities = 35/80 (44%), Positives = 50/80 (63%), Gaps = 1/80 (1%) |
NCBI |
Show Blast
|
CBJ32479.1 |
conserved unknown protein [Ectocarpus siliculosus]
Evalue: 3e-09 | Bitscore: 68 Identities = 32/87 (37%), Positives = 52/87 (60%), Gaps = 1/87 (1%) |
NCBI |
Show Blast
|
XP_002766805.1 |
hypothetical protein Pmar_PMAR026888 [Perkinsus marinus ATCC 50983]
Evalue: 7e-05 | Bitscore: 53 Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 2/42 (5%) |
NCBI |
Show Blast
|
XP_002673387.1 |
predicted protein [Naegleria gruberi]
Evalue: 0.001 | Bitscore: 49 Identities = 42/163 (26%), Positives = 68/163 (42%), Gaps = 35/163 (21%) |
NCBI |
Show Blast
|
XP_002779381.1 |
hypothetical protein Pmar_PMAR015098 [Perkinsus marinus ATCC 50983]
Evalue: 0.003 | Bitscore: 48 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
XP_001419823.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 3e-43 | Bitscore: 181 Identities = 100/297 (34%), Positives = 156/297 (53%), Gaps = 56/297 (19%) |
NCBI |
Show Blast
|
XP_003081333.1 |
unnamed protein product [Ostreococcus tauri]
Evalue: 2e-39 | Bitscore: 168 Identities = 99/345 (29%), Positives = 166/345 (48%), Gaps = 69/345 (20%) |
NCBI |
Show Blast
|
XP_002502215.1 |
predicted protein [Micromonas sp. RCC299]
Evalue: 1e-38 | Bitscore: 165 Identities = 87/194 (45%), Positives = 128/194 (66%), Gaps = 6/194 (3%) |
NCBI |
Show Blast
|
XP_002768532.1 |
hypothetical protein Pmar_PMAR020156 [Perkinsus marinus ATCC 50983]
Evalue: 7e-25 | Bitscore: 119 Identities = 86/300 (29%), Positives = 134/300 (45%), Gaps = 64/300 (21%) |
NCBI |
Show Blast
|
EGB09898.1 |
hypothetical protein AURANDRAFT_62958 [Aureococcus anophagefferens]
Evalue: 1e-23 | Bitscore: 115 Identities = 68/199 (34%), Positives = 105/199 (53%), Gaps = 10/199 (5%) |
NCBI |
Show Blast
|
XP_003059537.1 |
predicted protein [Micromonas pusilla CCMP1545]
Evalue: 8e-14 | Bitscore: 83 Identities = 35/80 (44%), Positives = 50/80 (63%), Gaps = 1/80 (1%) |
NCBI |
Show Blast
|
CBJ32479.1 |
conserved unknown protein [Ectocarpus siliculosus]
Evalue: 3e-09 | Bitscore: 68 Identities = 32/87 (37%), Positives = 52/87 (60%), Gaps = 1/87 (1%) |
NCBI |
Show Blast
|
XP_002766805.1 |
hypothetical protein Pmar_PMAR026888 [Perkinsus marinus ATCC 50983]
Evalue: 7e-05 | Bitscore: 53 Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 2/42 (5%) |
NCBI |
Show Blast
|
XP_002673387.1 |
predicted protein [Naegleria gruberi]
Evalue: 0.001 | Bitscore: 49 Identities = 42/163 (26%), Positives = 68/163 (42%), Gaps = 35/163 (21%) |
NCBI |
Show Blast
|
XP_002779381.1 |
hypothetical protein Pmar_PMAR015098 [Perkinsus marinus ATCC 50983]
Evalue: 0.003 | Bitscore: 48 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%) |
NCBI |
Show Blast
|
No hits found against database Self with an e-value better than 1e-3. |
No hits found against database SwissP with an e-value better than 1e-3. |
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
EST ID | SuperContig_8.clus358.Contig1 |
Support Model | Y |
More Info |
Mapping Location | 207342..207728 |
Strand + |
EST ID | SuperContig_8.clus358.Contig2 |
Support Model | Y |
More Info |
Mapping Location | 207775..208412 |
Strand + |
|