- Gene ID
- Bathy09g04550
- Locus
- Bathy09g04550
- Functional Description
- mitochondrial carrier family
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_09
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- mitochondrial carrier family
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
| Domain ID | Description | Database |
|---|
|
PTHR24089 |
FAMILY NOT NAMED |
HMMPanther |
|
IPR002067 |
Mitochondrial carrier protein |
InterPro |
|
IPR018249 |
EF-HAND 2 |
InterPro |
|
IPR002048 |
Calcium-binding EF-hand |
InterPro |
|
IPR011992 |
EF-hand-like domain |
InterPro |
|
IPR023395 |
Mitochondrial carrier domain |
InterPro |
|
IPR018108 |
Mitochondrial substrate/solute carrier |
InterPro |
Protein Homologs
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| XP_002499375.1 |
mitochondrial carrier family [Micromonas sp. RCC299]
Evalue: 4e-173 | Bitscore: 613
Identities = 317/641 (49%), Positives = 433/641 (68%), Gaps = 60/641 (9%) |
NCBI |
Show Blast
|
| XP_003055826.1 |
mitochondrial carrier family [Micromonas pusilla CCMP1545]
Evalue: 8e-136 | Bitscore: 489
Identities = 253/500 (51%), Positives = 337/500 (67%), Gaps = 37/500 (7%) |
NCBI |
Show Blast
|
| XP_001420715.1 |
MC family transporter: aspartate/glutamate (Ca2+-activated) [Ostreococcus lucimarinus CCE9901]
Evalue: 2e-135 | Bitscore: 487
Identities = 250/488 (51%), Positives = 340/488 (70%), Gaps = 48/488 (10%) |
NCBI |
Show Blast
|
| XP_003082463.1 |
putative adenylate translocator (ISS) [Ostreococcus tauri]
Evalue: 2e-81 | Bitscore: 308
Identities = 162/338 (48%), Positives = 223/338 (66%), Gaps = 44/338 (13%) |
NCBI |
Show Blast
|
| XP_003082471.1 |
putative peroxisomal Ca-dependent solute carrier protein (ISS) [Ostreococcus tauri]
Evalue: 1e-52 | Bitscore: 213
Identities = 106/247 (43%), Positives = 161/247 (65%), Gaps = 20/247 (8%) |
NCBI |
Show Blast
|
| A5PJZ1 |
Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1
Evalue: 7e-47 | Bitscore: 189
Identities = 141/506 (27%), Positives = 243/506 (48%), Gaps = 64/506 (12%) |
SwissP |
Show Blast
|
| Q6NUK1 |
Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2
Evalue: 7e-47 | Bitscore: 189
Identities = 145/506 (28%), Positives = 244/506 (48%), Gaps = 64/506 (12%) |
SwissP |
Show Blast
|
| Q8BMD8 |
Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1
Evalue: 2e-46 | Bitscore: 188
Identities = 144/507 (28%), Positives = 240/507 (47%), Gaps = 68/507 (13%) |
SwissP |
Show Blast
|
| O18757 |
Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1
Evalue: 1e-45 | Bitscore: 185
Identities = 141/504 (27%), Positives = 240/504 (47%), Gaps = 62/504 (12%) |
SwissP |
Show Blast
|
| Q66L49 |
Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Danio rerio GN=slc25a24 PE=2 SV=1
Evalue: 7e-45 | Bitscore: 182
Identities = 136/509 (26%), Positives = 243/509 (47%), Gaps = 68/509 (13%) |
SwissP |
Show Blast
|
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| XP_002499375.1 |
mitochondrial carrier family [Micromonas sp. RCC299]
Evalue: 4e-173 | Bitscore: 613
Identities = 317/641 (49%), Positives = 433/641 (68%), Gaps = 60/641 (9%) |
NCBI |
Show Blast
|
| XP_003055826.1 |
mitochondrial carrier family [Micromonas pusilla CCMP1545]
Evalue: 8e-136 | Bitscore: 489
Identities = 253/500 (51%), Positives = 337/500 (67%), Gaps = 37/500 (7%) |
NCBI |
Show Blast
|
| XP_001420715.1 |
MC family transporter: aspartate/glutamate (Ca2+-activated) [Ostreococcus lucimarinus CCE9901]
Evalue: 2e-135 | Bitscore: 487
Identities = 250/488 (51%), Positives = 340/488 (70%), Gaps = 48/488 (10%) |
NCBI |
Show Blast
|
| XP_003082463.1 |
putative adenylate translocator (ISS) [Ostreococcus tauri]
Evalue: 2e-81 | Bitscore: 308
Identities = 162/338 (48%), Positives = 223/338 (66%), Gaps = 44/338 (13%) |
NCBI |
Show Blast
|
| XP_003082471.1 |
putative peroxisomal Ca-dependent solute carrier protein (ISS) [Ostreococcus tauri]
Evalue: 1e-52 | Bitscore: 213
Identities = 106/247 (43%), Positives = 161/247 (65%), Gaps = 20/247 (8%) |
NCBI |
Show Blast
|
| XP_002438639.1 |
hypothetical protein SORBIDRAFT_10g023470 [Sorghum bicolor]
Evalue: 5e-36 | Bitscore: 157
Identities = 91/244 (37%), Positives = 137/244 (56%), Gaps = 14/244 (6%) |
NCBI |
Show Blast
|
| BAJ91824.1 |
predicted protein [Hordeum vulgare subsp. vulgare]
Evalue: 4e-34 | Bitscore: 151
Identities = 106/315 (34%), Positives = 159/315 (50%), Gaps = 47/315 (15%) |
NCBI |
Show Blast
|
| NP_001054775.1 |
Os05g0171300 [Oryza sativa Japonica Group]
Evalue: 6e-34 | Bitscore: 150
Identities = 108/316 (34%), Positives = 158/316 (50%), Gaps = 49/316 (16%) |
NCBI |
Show Blast
|
| XP_002439370.1 |
hypothetical protein SORBIDRAFT_09g005250 [Sorghum bicolor]
Evalue: 1e-33 | Bitscore: 149
Identities = 106/315 (34%), Positives = 157/315 (50%), Gaps = 47/315 (15%) |
NCBI |
Show Blast
|
| NP_001159268.1 |
hypothetical protein LOC100304358 [Zea mays]
Evalue: 1e-33 | Bitscore: 149
Identities = 101/316 (32%), Positives = 157/316 (50%), Gaps = 49/316 (16%) |
NCBI |
Show Blast
|
| No hits found against database Self with an e-value better than 1e-3. |
| ProteinID | Description / BlastScore | Database | Actions |
|---|
| A5PJZ1 |
Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1
Evalue: 7e-47 | Bitscore: 189
Identities = 141/506 (27%), Positives = 243/506 (48%), Gaps = 64/506 (12%) |
SwissP |
Show Blast
|
| Q6NUK1 |
Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2
Evalue: 7e-47 | Bitscore: 189
Identities = 145/506 (28%), Positives = 244/506 (48%), Gaps = 64/506 (12%) |
SwissP |
Show Blast
|
| Q8BMD8 |
Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1
Evalue: 2e-46 | Bitscore: 188
Identities = 144/507 (28%), Positives = 240/507 (47%), Gaps = 68/507 (13%) |
SwissP |
Show Blast
|
| O18757 |
Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1
Evalue: 1e-45 | Bitscore: 185
Identities = 141/504 (27%), Positives = 240/504 (47%), Gaps = 62/504 (12%) |
SwissP |
Show Blast
|
| Q66L49 |
Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Danio rerio GN=slc25a24 PE=2 SV=1
Evalue: 7e-45 | Bitscore: 182
Identities = 136/509 (26%), Positives = 243/509 (47%), Gaps = 68/509 (13%) |
SwissP |
Show Blast
|
| Q7ZYD5 |
Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus laevis GN=slc25a25 PE=2 SV=1
Evalue: 1e-44 | Bitscore: 182
Identities = 141/512 (27%), Positives = 250/512 (48%), Gaps = 66/512 (12%) |
SwissP |
Show Blast
|
| Q628Z2 |
Probable calcium-binding mitochondrial carrier CBG00135 OS=Caenorhabditis briggsae GN=CBG00135 PE=3 SV=1
Evalue: 4e-43 | Bitscore: 177
Identities = 136/509 (26%), Positives = 243/509 (47%), Gaps = 66/509 (12%) |
SwissP |
Show Blast
|
| Q7T0U6 |
Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-b PE=2 SV=1
Evalue: 1e-41 | Bitscore: 171
Identities = 139/505 (27%), Positives = 240/505 (47%), Gaps = 63/505 (12%) |
SwissP |
Show Blast
|
| Q7ZY36 |
Calcium-binding mitochondrial carrier protein SCaMC-1-A OS=Xenopus laevis GN=slc25a24-a PE=2 SV=2
Evalue: 3e-41 | Bitscore: 171
Identities = 139/508 (27%), Positives = 237/508 (46%), Gaps = 69/508 (13%) |
SwissP |
Show Blast
|
| Q19529 |
Probable calcium-binding mitochondrial carrier F17E5.2 OS=Caenorhabditis elegans GN=F17E5.2 PE=2 SV=4
Evalue: 3e-41 | Bitscore: 171
Identities = 127/503 (25%), Positives = 233/503 (46%), Gaps = 55/503 (10%) |
SwissP |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- +
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
| EST ID | SuperContig_7.clus595.Contig1 |
Support Model | Y |
More Info |
| Mapping Location | 860510..860802 |
Strand + |
| EST ID | SuperContig_7.clus155.Contig1 |
Support Model | Y |
More Info |
| Mapping Location | 861760..862148 |
Strand + |
|
