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Bathycoccus prasinos


Gene ID
Bathy09g02200
Locus
Bathy09g02200
Functional Description
predicted protein
Gene Type
protein-coding gene
Contig
bathy_chrom_09
Last Modified On
12 July 2011 21h39
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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pico-PLAZA - lookup this gene in the PLAZA resource

Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
predicted protein
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

n/a
 

Protein Domains 


Domain IDDescriptionDatabase
IPR002109 Glutaredoxin InterPro
IPR012335 Thioredoxin fold InterPro
IPR011767 Glutaredoxin active site InterPro
IPR012336 Thioredoxin-like fold InterPro
IPR004045 Glutathione S-transferase, N-terminal InterPro
PTHR11260 FAMILY NOT NAMED HMMPanther

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
XP_002501702.1 predicted protein [Micromonas sp. RCC299]
Evalue: 9e-74 | Bitscore: 281
Identities = 167/285 (59%), Positives = 201/285 (71%), Gaps = 20/285 (7%)		 NCBI
Show Blast
XP_003062632.1 predicted protein [Micromonas pusilla CCMP1545]
Evalue: 1e-66 | Bitscore: 258
Identities = 151/272 (56%), Positives = 180/272 (66%), Gaps = 25/272 (9%)		 NCBI
Show Blast
XP_001769429.1 predicted protein [Physcomitrella patens subsp. patens]
Evalue: 5e-61 | Bitscore: 239
Identities = 139/261 (53%), Positives = 175/261 (67%), Gaps = 11/261 (4%)		 NCBI
Show Blast
XP_002446530.1 hypothetical protein SORBIDRAFT_06g017640 [Sorghum bicolor]
Evalue: 9e-60 | Bitscore: 234
Identities = 135/260 (52%), Positives = 175/260 (67%), Gaps = 11/260 (4%)		 NCBI
Show Blast
XP_002970371.1 hypothetical protein SELMODRAFT_441208 [Selaginella moellendorffii]
Evalue: 5e-59 | Bitscore: 232
Identities = 133/258 (52%), Positives = 169/258 (66%), Gaps = 9/258 (3%)		 NCBI
Show Blast
XP_002968138.1 hypothetical protein SELMODRAFT_440313 [Selaginella moellendorffii]
Evalue: 8e-59 | Bitscore: 231
Identities = 134/258 (52%), Positives = 169/258 (66%), Gaps = 9/258 (3%)		 NCBI
Show Blast
ABK26908.1 unknown [Picea sitchensis]
Evalue: 2e-58 | Bitscore: 230
Identities = 135/261 (52%), Positives = 170/261 (65%), Gaps = 11/261 (4%)		 NCBI
Show Blast
XP_002327378.1 predicted protein [Populus trichocarpa]
Evalue: 6e-58 | Bitscore: 229
Identities = 133/262 (51%), Positives = 176/262 (67%), Gaps = 12/262 (5%)		 NCBI
Show Blast
NP_567349.1 electron carrier/ protein disulfide oxidoreductase [Arabidopsis thaliana]
Evalue: 2e-57 | Bitscore: 227
Identities = 134/263 (51%), Positives = 175/263 (67%), Gaps = 11/263 (4%)		 NCBI
Show Blast
BAH19637.1 AT4G10000 [Arabidopsis thaliana]
Evalue: 2e-57 | Bitscore: 227
Identities = 134/263 (51%), Positives = 175/263 (67%), Gaps = 11/263 (4%)		 NCBI
Show Blast

Gene Structure 

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Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
-
Structure Quality
2

Alternative Models  

n/a
 

CDS  

Locus ID
Bathy09g02200
Redo Blast
CDS Length
990 nucleotides
CDS Sequence

Protein 

Locus ID
Bathy09g02200
Redo Blast
Protein Length
330 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a