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Bathycoccus prasinos


Gene ID
Bathy09g02170
Locus
Bathy09g02170
Functional Description
3-phosphoinositide-dependent protein kinase-1 (ISS)
Gene Type
protein-coding gene
Contig
bathy_chrom_09
Last Modified On
12 July 2011 21h39
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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pico-PLAZA - lookup this gene in the PLAZA resource

Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
3-phosphoinositide-dependent protein kinase-1 (ISS)
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
1.
calcium ion binding

Biological Process
n/a

Protein Domains 


Domain IDDescriptionDatabase
IPR018249 EF-HAND 2 InterPro
PTHR10891 EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN HMMPanther
IPR011992 EF-hand-like domain InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
XP_003078129.1 3-phosphoinositide-dependent protein kinase-1 (ISS) [Ostreococcus tauri]
Evalue: 5e-14 | Bitscore: 84
Identities = 76/227 (33%), Positives = 118/227 (52%), Gaps = 29/227 (13%)		 NCBI
Show Blast
XP_001416635.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 3e-12 | Bitscore: 78
Identities = 66/219 (30%), Positives = 102/219 (47%), Gaps = 22/219 (10%)		 NCBI
Show Blast
ABN41559.1 calmodulin [Porphyra yezoensis]
Evalue: 4e-05 | Bitscore: 54
Identities = 49/166 (30%), Positives = 86/166 (52%), Gaps = 25/166 (15%)		 NCBI
Show Blast
XP_002739773.1 PREDICTED: putative Vitellogenin-linked Transcript family member-like [Saccoglossus kowalevskii]
Evalue: 0.0001 | Bitscore: 53
Identities = 22/70 (31%), Positives = 41/70 (59%), Gaps = 0/70 (0%)		 NCBI
Show Blast
NP_001151507.1 calmodulin [Zea mays]
Evalue: 0.0001 | Bitscore: 53
Identities = 37/137 (27%), Positives = 72/137 (53%), Gaps = 7/137 (5%)		 NCBI
Show Blast
EDL38633.1 mCG15892 [Mus musculus]
Evalue: 0.0005 | Bitscore: 50
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 21/155 (14%)		 NCBI
Show Blast
XP_002450213.1 hypothetical protein SORBIDRAFT_05g002010 [Sorghum bicolor]
Evalue: 0.0006 | Bitscore: 50
Identities = 38/155 (25%), Positives = 80/155 (52%), Gaps = 14/155 (9%)		 NCBI
Show Blast
CAA10472.1 calmodulin-like protein CaML3 [Branchiostoma lanceolatum]
Evalue: 0.0006 | Bitscore: 50
Identities = 38/143 (27%), Positives = 71/143 (50%), Gaps = 19/143 (13%)		 NCBI
Show Blast
XP_002734090.1 PREDICTED: calmodulin-like [Saccoglossus kowalevskii]
Evalue: 0.0006 | Bitscore: 50
Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (8%)		 NCBI
Show Blast
NP_593340.1 calmodulin Cam1 [Schizosaccharomyces pombe 972h-] sp|P05933.1|CALM_SCHPO RecName: Full=Calmodulin; Short=CaM
Evalue: 0.001 | Bitscore: 49
Identities = 38/145 (26%), Positives = 72/145 (50%), Gaps = 19/145 (13%)		 NCBI
Show Blast

Gene Structure 

View in GenomeView|View in Artemini


Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
+
Structure Quality
2

Alternative Models  

n/a
 

CDS  

Locus ID
Bathy09g02170
Redo Blast
CDS Length
1605 nucleotides
CDS Sequence

Protein 

Locus ID
Bathy09g02170
Redo Blast
Protein Length
535 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a