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Bathycoccus prasinos


Gene ID
Bathy09g01840
Locus
Bathy09g01840
Functional Description
chaperone protein DnaJ
Gene Type
protein-coding gene
Contig
bathy_chrom_09
Last Modified On
12 July 2011 21h39
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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pico-PLAZA - lookup this gene in the PLAZA resource

Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
chaperone protein DnaJ
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

Cellular Component
n/a
Molecular Function
1.
heat shock protein binding

2.
unfolded protein binding

Biological Process
1.
protein folding

Protein Domains 


Domain IDDescriptionDatabase
IPR012335 Thioredoxin fold InterPro
IPR001623 Heat shock protein DnaJ, N-terminal InterPro
IPR003095 Heat shock protein DnaJ InterPro
PTHR24074 FAMILY NOT NAMED HMMPanther

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
XP_001416909.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 5e-52 | Bitscore: 211
Identities = 154/515 (30%), Positives = 242/515 (47%), Gaps = 77/515 (15%)
NCBI
Show Blast
XP_003078103.1 CG4599-PB, isoform B (ISS) [Ostreococcus tauri]
Evalue: 1e-46 | Bitscore: 193
Identities = 127/403 (32%), Positives = 193/403 (48%), Gaps = 75/403 (19%)
NCBI
Show Blast
XP_003062453.1 predicted protein [Micromonas pusilla CCMP1545]
Evalue: 2e-40 | Bitscore: 172
Identities = 136/514 (26%), Positives = 246/514 (48%), Gaps = 65/514 (13%)
NCBI
Show Blast
XP_002514733.1 heat shock protein binding protein, putative [Ricinus communis]
Evalue: 8e-25 | Bitscore: 120
Identities = 124/497 (25%), Positives = 212/497 (43%), Gaps = 74/497 (15%)
NCBI
Show Blast
XP_002329272.1 predicted protein [Populus trichocarpa]
Evalue: 1e-23 | Bitscore: 116
Identities = 118/499 (24%), Positives = 196/499 (39%), Gaps = 85/499 (17%)
NCBI
Show Blast
BAJ85138.1 predicted protein [Hordeum vulgare subsp. vulgare]
Evalue: 2e-22 | Bitscore: 112
Identities = 105/363 (29%), Positives = 150/363 (41%), Gaps = 27/363 (7%)
NCBI
Show Blast
BAJ86671.1 predicted protein [Hordeum vulgare subsp. vulgare]
Evalue: 1e-21 | Bitscore: 109
Identities = 100/345 (29%), Positives = 144/345 (42%), Gaps = 27/345 (8%)
NCBI
Show Blast
XP_002890294.1 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Evalue: 5e-21 | Bitscore: 108
Identities = 125/498 (25%), Positives = 211/498 (42%), Gaps = 81/498 (16%)
NCBI
Show Blast
CBI15203.3 unnamed protein product [Vitis vinifera]
Evalue: 8e-21 | Bitscore: 107
Identities = 88/334 (26%), Positives = 142/334 (43%), Gaps = 38/334 (11%)
NCBI
Show Blast
NP_001031065.1 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]
Evalue: 3e-20 | Bitscore: 105
Identities = 83/332 (25%), Positives = 144/332 (43%), Gaps = 32/332 (10%)
NCBI
Show Blast

Gene Structure 

View in GenomeView|View in Artemini


Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
+
Structure Quality
2

Alternative Models  

n/a
 

CDS  

Locus ID
Bathy09g01840
Redo Blast
CDS Length
2421 nucleotides
CDS Sequence

Protein 

Locus ID
Bathy09g01840
Redo Blast
Protein Length
807 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a