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Bathycoccus prasinos


Gene ID
Bathy09g01530
Locus
Bathy09g01530
Functional Description
predicted protein
Gene Type
protein-coding gene
Contig
bathy_chrom_09
Last Modified On
12 July 2011 21h39
History

Annotator  

Name
EuGene Automatic Prediction
Email
beg-orcae@psb.ugent.be
Lab
UGent
Status
active

Gene Actions  

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pico-PLAZA - lookup this gene in the PLAZA resource

Gene Function 

Short Name
n/a
Alternative Names
n/a
Definition
predicted protein
Additional Functional Description
n/a
Pubmed ID
n/a
EC Number
n/a
KOGid
n/a

Gene Ontology 

n/a
 

Protein Domains 


Domain IDDescriptionDatabase
IPR018247 EF-Hand 1, calcium-binding site InterPro

Protein Homologs 

View in Jalview


ProteinIDDescription / BlastScore DatabaseActions
XP_001422201.1 predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 3e-43 | Bitscore: 182
Identities = 159/571 (28%), Positives = 264/571 (46%), Gaps = 65/571 (11%)
NCBI
Show Blast
XP_002500982.1 predicted protein [Micromonas sp. RCC299]
Evalue: 3e-19 | Bitscore: 102
Identities = 50/140 (36%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
NCBI
Show Blast
XP_003064329.1 predicted protein [Micromonas pusilla CCMP1545]
Evalue: 2e-18 | Bitscore: 99
Identities = 52/142 (37%), Positives = 76/142 (54%), Gaps = 4/142 (3%)
NCBI
Show Blast
XP_003084094.1 unnamed protein product [Ostreococcus tauri]
Evalue: 1e-13 | Bitscore: 84
Identities = 81/344 (24%), Positives = 163/344 (47%), Gaps = 37/344 (11%)
NCBI
Show Blast
XP_003084093.1 unnamed protein product [Ostreococcus tauri]
Evalue: 1e-07 | Bitscore: 63
Identities = 34/91 (37%), Positives = 50/91 (55%), Gaps = 1/91 (1%)
NCBI
Show Blast

Gene Structure 

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Download gene in EMBL format

Structure
Sequence Type
mRNA
Strand
+
Structure Quality
2

Alternative Models  

n/a
 

CDS  

Locus ID
Bathy09g01530
Redo Blast
CDS Length
2958 nucleotides
CDS Sequence

Protein 

Locus ID
Bathy09g01530
Redo Blast
Protein Length
986 aminoacids
Protein Sequence
Signal Peptide
n/a
Subcellular Localisation
n/a

Associated ESTs/cDNAs 

n/a