- Gene ID
- Bathy08g04370
- Locus
- Bathy08g04370
- Functional Description
- alanyl-tRNA synthetase
- Gene Type
- protein-coding gene
- Contig
- bathy_chrom_08
- Last Modified On
- 12 July 2011 21h39
- History
-
Annotator
- Name
- EuGene Automatic Prediction
- Email
- beg-orcae@psb.ugent.be
- Lab
- UGent
- Status
- active
Gene Actions
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pico-PLAZA - lookup this gene in the PLAZA resource |
Gene Function
- Short Name
- n/a
- Alternative Names
- n/a
- Definition
- alanyl-tRNA synthetase
- Additional Functional Description
- n/a
- Pubmed ID
- n/a
- EC Number
- n/a
- KOGid
- n/a
Gene Ontology
- n/a
-
Protein Domains
Domain ID | Description | Database |
IPR018163 |
Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain |
InterPro |
IPR002318 |
Alanyl-tRNA synthetase, class IIc |
InterPro |
IPR012335 |
Thioredoxin fold |
InterPro |
IPR017933 |
Glutathione S-transferase/chloride channel, C-terminal |
InterPro |
PTHR11777 |
FAMILY NOT NAMED |
HMMPanther |
IPR004045 |
Glutathione S-transferase, N-terminal |
InterPro |
IPR018165 |
Alanyl-tRNA synthetase, class IIc, core domain |
InterPro |
IPR018164 |
Alanyl-tRNA synthetase, class IIc, N-terminal |
InterPro |
IPR012947 |
Threonyl/alanyl tRNA synthetase, SAD |
InterPro |
IPR003156 |
Phosphoesterase, DHHA1 |
InterPro |
IPR010987 |
Glutathione S-transferase, C-terminal-like |
InterPro |
G3DSA:3.30.930.10 |
no description |
Gene3D |
IPR012336 |
Thioredoxin-like fold |
InterPro |
Protein Homologs
ProteinID | Description / BlastScore | Database | Actions |
XP_003079014.1 |
SYA_ARATH Alanyl-tRNA synthetase, mitochondrial precursor (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1271 Identities = 691/1181 (59%), Positives = 850/1181 (72%), Gaps = 39/1181 (3%) |
NCBI |
Show Blast
|
XP_001417607.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 1085 Identities = 573/933 (61%), Positives = 689/933 (74%), Gaps = 10/933 (1%) |
NCBI |
Show Blast
|
XP_002504833.1 |
alanyl-tRNA synthetase [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 1051 Identities = 580/914 (63%), Positives = 685/914 (75%), Gaps = 13/914 (1%) |
NCBI |
Show Blast
|
XP_003060777.1 |
alanyl-tRNA synthetase [Micromonas pusilla CCMP1545]
Evalue: 0.0 | Bitscore: 1043 Identities = 566/943 (60%), Positives = 682/943 (72%), Gaps = 28/943 (3%) |
NCBI |
Show Blast
|
XP_002277341.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 0.0 | Bitscore: 911 Identities = 511/935 (55%), Positives = 649/935 (69%), Gaps = 17/935 (2%) |
NCBI |
Show Blast
|
EEC66648.1 |
hypothetical protein OsI_32912 [Oryza sativa Indica Group]
Evalue: 0.0 | Bitscore: 904 Identities = 507/937 (54%), Positives = 651/937 (69%), Gaps = 17/937 (2%) |
NCBI |
Show Blast
|
NP_001064254.1 |
Os10g0182000 [Oryza sativa Japonica Group]
Evalue: 0.0 | Bitscore: 902 Identities = 508/934 (54%), Positives = 651/934 (70%), Gaps = 17/934 (2%) |
NCBI |
Show Blast
|
XP_002531134.1 |
alanyl-tRNA synthetase, putative [Ricinus communis]
Evalue: 0.0 | Bitscore: 902 Identities = 498/927 (54%), Positives = 643/927 (69%), Gaps = 16/927 (2%) |
NCBI |
Show Blast
|
CBI26461.3 |
unnamed protein product [Vitis vinifera]
Evalue: 0.0 | Bitscore: 894 Identities = 515/953 (54%), Positives = 646/953 (68%), Gaps = 25/953 (3%) |
NCBI |
Show Blast
|
XP_001773539.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 0.0 | Bitscore: 892 Identities = 503/934 (54%), Positives = 654/934 (70%), Gaps = 21/934 (2%) |
NCBI |
Show Blast
|
ProteinID | Description / BlastScore | Database | Actions |
XP_003079014.1 |
SYA_ARATH Alanyl-tRNA synthetase, mitochondrial precursor (ISS) [Ostreococcus tauri]
Evalue: 0.0 | Bitscore: 1271 Identities = 691/1181 (59%), Positives = 850/1181 (72%), Gaps = 39/1181 (3%) |
NCBI |
Show Blast
|
XP_001417607.1 |
predicted protein [Ostreococcus lucimarinus CCE9901]
Evalue: 0.0 | Bitscore: 1085 Identities = 573/933 (61%), Positives = 689/933 (74%), Gaps = 10/933 (1%) |
NCBI |
Show Blast
|
XP_002504833.1 |
alanyl-tRNA synthetase [Micromonas sp. RCC299]
Evalue: 0.0 | Bitscore: 1051 Identities = 580/914 (63%), Positives = 685/914 (75%), Gaps = 13/914 (1%) |
NCBI |
Show Blast
|
XP_003060777.1 |
alanyl-tRNA synthetase [Micromonas pusilla CCMP1545]
Evalue: 0.0 | Bitscore: 1043 Identities = 566/943 (60%), Positives = 682/943 (72%), Gaps = 28/943 (3%) |
NCBI |
Show Blast
|
XP_002277341.1 |
PREDICTED: hypothetical protein [Vitis vinifera]
Evalue: 0.0 | Bitscore: 911 Identities = 511/935 (55%), Positives = 649/935 (69%), Gaps = 17/935 (2%) |
NCBI |
Show Blast
|
EEC66648.1 |
hypothetical protein OsI_32912 [Oryza sativa Indica Group]
Evalue: 0.0 | Bitscore: 904 Identities = 507/937 (54%), Positives = 651/937 (69%), Gaps = 17/937 (2%) |
NCBI |
Show Blast
|
NP_001064254.1 |
Os10g0182000 [Oryza sativa Japonica Group]
Evalue: 0.0 | Bitscore: 902 Identities = 508/934 (54%), Positives = 651/934 (70%), Gaps = 17/934 (2%) |
NCBI |
Show Blast
|
XP_002531134.1 |
alanyl-tRNA synthetase, putative [Ricinus communis]
Evalue: 0.0 | Bitscore: 902 Identities = 498/927 (54%), Positives = 643/927 (69%), Gaps = 16/927 (2%) |
NCBI |
Show Blast
|
CBI26461.3 |
unnamed protein product [Vitis vinifera]
Evalue: 0.0 | Bitscore: 894 Identities = 515/953 (54%), Positives = 646/953 (68%), Gaps = 25/953 (3%) |
NCBI |
Show Blast
|
XP_001773539.1 |
predicted protein [Physcomitrella patens subsp. patens]
Evalue: 0.0 | Bitscore: 892 Identities = 503/934 (54%), Positives = 654/934 (70%), Gaps = 21/934 (2%) |
NCBI |
Show Blast
|
No hits found against database Self with an e-value better than 1e-3. |
ProteinID | Description / BlastScore | Database | Actions |
P36428 |
Alanyl-tRNA synthetase OS=Arabidopsis thaliana GN=ALATS PE=1 SV=3
Evalue: 0.0 | Bitscore: 872 Identities = 456/945 (48%), Positives = 600/945 (63%), Gaps = 17/945 (1%) |
SwissP |
Show Blast
|
Q5A8K2 |
Alanyl-tRNA synthetase OS=Candida albicans GN=ALA1 PE=1 SV=1
Evalue: 0.0 | Bitscore: 798 Identities = 419/831 (50%), Positives = 536/831 (64%), Gaps = 21/831 (2%) |
SwissP |
Show Blast
|
P40825 |
Alanyl-tRNA synthetase OS=Saccharomyces cerevisiae GN=ALA1 PE=1 SV=3
Evalue: 0.0 | Bitscore: 778 Identities = 409/832 (49%), Positives = 521/832 (62%), Gaps = 24/832 (2%) |
SwissP |
Show Blast
|
O13914 |
Alanyl-tRNA synthetase OS=Schizosaccharomyces pombe GN=ala1 PE=1 SV=1
Evalue: 0.0 | Bitscore: 773 Identities = 419/928 (45%), Positives = 560/928 (60%), Gaps = 28/928 (3%) |
SwissP |
Show Blast
|
Q5AQL1 |
Alanyl-tRNA synthetase OS=Emericella nidulans GN=ala1 PE=3 SV=2
Evalue: 0.0 | Bitscore: 768 Identities = 409/919 (44%), Positives = 550/919 (59%), Gaps = 29/919 (3%) |
SwissP |
Show Blast
|
Q54Y20 |
Alanyl-tRNA synthetase, cytoplasmic OS=Dictyostelium discoideum GN=alaS PE=2 SV=1
Evalue: 0.0 | Bitscore: 768 Identities = 428/937 (45%), Positives = 557/937 (59%), Gaps = 30/937 (3%) |
SwissP |
Show Blast
|
Q5RC02 |
Alanyl-tRNA synthetase, cytoplasmic OS=Pongo abelii GN=AARS PE=2 SV=1
Evalue: 0.0 | Bitscore: 716 Identities = 403/930 (43%), Positives = 546/930 (58%), Gaps = 34/930 (3%) |
SwissP |
Show Blast
|
Q8CFX8 |
Alanyl-tRNA synthetase, cytoplasmic OS=Mesocricetus auratus GN=Aars PE=2 SV=1
Evalue: 0.0 | Bitscore: 715 Identities = 404/926 (43%), Positives = 539/926 (58%), Gaps = 34/926 (3%) |
SwissP |
Show Blast
|
P49588 |
Alanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2
Evalue: 0.0 | Bitscore: 714 Identities = 403/930 (43%), Positives = 544/930 (58%), Gaps = 34/930 (3%) |
SwissP |
Show Blast
|
Q8BGQ7 |
Alanyl-tRNA synthetase, cytoplasmic OS=Mus musculus GN=Aars PE=1 SV=1
Evalue: 0.0 | Bitscore: 709 Identities = 398/929 (42%), Positives = 541/929 (58%), Gaps = 32/929 (3%) |
SwissP |
Show Blast
|
Gene Structure
View in GenomeView| View in Artemini
Download gene in EMBL format
- Structure
- Sequence Type
- mRNA
- Strand
- -
- Structure Quality
- 2
Alternative Models
- n/a
-
Protein
Associated ESTs/cDNAs
View in GenomeView| View in Artemini
EST ID | SuperContig_6.clus731.Contig1 |
Support Model | Y |
More Info |
Mapping Location | 793035..793357 |
Strand - |
EST ID | SuperContig_6.clus381.Contig1 |
Support Model | Y |
More Info |
Mapping Location | 793359..793642 |
Strand - |
EST ID | SuperContig_6.clus525.Contig1 |
Support Model | Y |
More Info |
Mapping Location | 793641..794231 |
Strand - |
EST ID | SuperContig_6.clus610.Contig1 |
Support Model | Y |
More Info |
Mapping Location | 794715..795469 |
Strand - |
|